RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
CNOT1-207ENST00000565605 AK7Q96M32 723 aa12.87□□□□□ -0.35
CNOT1-207ENST00000565605 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
CNOT1-207ENST00000565605 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
CNOT1-207ENST00000565605 TAF1LQ8IZX4 1826 aa12.86□□□□□ -0.35
CNOT1-207ENST00000565605 C4BP0C0L5 1744 aa12.86□□□□□ -0.35
CNOT1-207ENST00000565605 U2AF1L5P0DN76 240 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-207ENST00000565605 U2AF1Q01081 240 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■■□ 20.1
CNOT1-207ENST00000565605 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
CNOT1-207ENST00000565605 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
CNOT1-207ENST00000565605 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-207ENST00000565605 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
CNOT1-207ENST00000565605 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 ERVV-2B6SEH9 535 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 KIF3CO14782 793 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 SIK1P57059 783 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 CABP4P57796 275 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 ITPK1Q13572 414 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
CNOT1-207ENST00000565605 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
CNOT1-207ENST00000565605 SSFA2P28290 1259 aa12.83□□□□□ -0.36
CNOT1-207ENST00000565605 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
CNOT1-207ENST00000565605 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
CNOT1-207ENST00000565605 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
CNOT1-207ENST00000565605 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
CNOT1-207ENST00000565605 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
CNOT1-207ENST00000565605 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
CNOT1-207ENST00000565605 ITGB4P16144 1822 aa12.82□□□□□ -0.36
CNOT1-207ENST00000565605 GNPATO15228 680 aa12.81□□□□□ -0.36
CNOT1-207ENST00000565605 FCHSD2O94868 740 aa12.81□□□□□ -0.36
CNOT1-207ENST00000565605 NEFMP07197 916 aa12.81□□□□□ -0.36
CNOT1-207ENST00000565605 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
CNOT1-207ENST00000565605 RNMTO43148 476 aaKnown RBP12.8□□□□□ -0.36
CNOT1-207ENST00000565605 MMP10P09238 476 aa12.8□□□□□ -0.36
CNOT1-207ENST00000565605 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
CNOT1-207ENST00000565605 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
CNOT1-207ENST00000565605 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
CNOT1-207ENST00000565605 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-207ENST00000565605 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
CNOT1-207ENST00000565605 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
CNOT1-207ENST00000565605 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
CNOT1-207ENST00000565605 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
CNOT1-207ENST00000565605 DNAJC5GQ8N7S2 189 aa12.78□□□□□ -0.36
CNOT1-207ENST00000565605 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
CNOT1-207ENST00000565605 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
CNOT1-207ENST00000565605 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
CNOT1-207ENST00000565605 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
CNOT1-207ENST00000565605 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.36
CNOT1-207ENST00000565605 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
CNOT1-207ENST00000565605 MRC1P22897 1456 aa12.77□□□□□ -0.37
CNOT1-207ENST00000565605 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
CNOT1-207ENST00000565605 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
CNOT1-207ENST00000565605 ANP32CO43423 234 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 DPEP1P16444 411 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 APLP1P51693 650 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 TGFB2P61812 414 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 TEFQ10587 303 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
CNOT1-207ENST00000565605 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
CNOT1-207ENST00000565605 KIAA1551Q9HCM1 1747 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 NMRK2Q9NPI5 230 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
CNOT1-207ENST00000565605 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
CNOT1-207ENST00000565605 C10orf71Q711Q0 1435 aa12.74□□□□□ -0.37
CNOT1-207ENST00000565605 TOMM70O94826 608 aa12.74□□□□□ -0.37
CNOT1-207ENST00000565605 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
CNOT1-207ENST00000565605 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
CNOT1-207ENST00000565605 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
CNOT1-207ENST00000565605 GYS1P13807 737 aa12.73□□□□□ -0.37
CNOT1-207ENST00000565605 KCNA3P22001 575 aa12.73□□□□□ -0.37
CNOT1-207ENST00000565605 IL17REQ8NFR9 667 aa12.73□□□□□ -0.37
CNOT1-207ENST00000565605 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
CNOT1-207ENST00000565605 N4BP2Q86UW6 1770 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-207ENST00000565605 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
CNOT1-207ENST00000565605 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
CNOT1-207ENST00000565605 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-207ENST00000565605 HTRA3P83110 453 aa12.72□□□□□ -0.37
CNOT1-207ENST00000565605 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
CNOT1-207ENST00000565605 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
CNOT1-207ENST00000565605 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
CNOT1-207ENST00000565605 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
CNOT1-207ENST00000565605 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.37
CNOT1-207ENST00000565605 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
CNOT1-207ENST00000565605 MCM10Q7L590 875 aa12.71□□□□□ -0.37
CNOT1-207ENST00000565605 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-207ENST00000565605 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
CNOT1-207ENST00000565605 RFC4P35249 363 aa12.7□□□□□ -0.38
CNOT1-207ENST00000565605 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
CNOT1-207ENST00000565605 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
CNOT1-207ENST00000565605 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
CNOT1-207ENST00000565605 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
CNOT1-207ENST00000565605 CCDC146Q8IYE0 955 aa12.69□□□□□ -0.38
CNOT1-207ENST00000565605 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
CNOT1-207ENST00000565605 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
CNOT1-207ENST00000565605 PCNTO95613 3336 aa12.69□□□□□ -0.38
CNOT1-207ENST00000565605 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
CNOT1-207ENST00000565605 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms