RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
CCNDBP1-206ENST00000565296 COL5A3P25940 1745 aaPredicted RBP18.04■□□□□ 0.48
CCNDBP1-206ENST00000565296 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
CCNDBP1-206ENST00000565296 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
CCNDBP1-206ENST00000565296 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
CCNDBP1-206ENST00000565296 PSDA5PKW4 1024 aaPredicted RBP18.02■□□□□ 0.48
CCNDBP1-206ENST00000565296 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
CCNDBP1-206ENST00000565296 PDGFDQ9GZP0 370 aaPredicted RBP18.02■□□□□ 0.48
CCNDBP1-206ENST00000565296 TFCP2L1Q9NZI6 479 aa18.02■□□□□ 0.48
CCNDBP1-206ENST00000565296 STARD3NLO95772 234 aa18.02■□□□□ 0.47
CCNDBP1-206ENST00000565296 GOLGA2Q08379 1002 aa18.02■□□□□ 0.47
CCNDBP1-206ENST00000565296 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.47
CCNDBP1-206ENST00000565296 AK7Q96M32 723 aa18.02■□□□□ 0.47
CCNDBP1-206ENST00000565296 GNPATO15228 680 aa18.01■□□□□ 0.47
CCNDBP1-206ENST00000565296 A1BGP04217 495 aa18.01■□□□□ 0.47
CCNDBP1-206ENST00000565296 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
CCNDBP1-206ENST00000565296 CCDC87Q9NVE4 849 aa18.01■□□□□ 0.47
CCNDBP1-206ENST00000565296 ZBTB1Q9Y2K1 713 aa18.01■□□□□ 0.47
CCNDBP1-206ENST00000565296 PNPLA7Q6ZV29 1317 aa18.01■□□□□ 0.47
CCNDBP1-206ENST00000565296 SLFN5Q08AF3 891 aa18■□□□□ 0.47
CCNDBP1-206ENST00000565296 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
CCNDBP1-206ENST00000565296 TSPYL6Q8N831 410 aa18■□□□□ 0.47
CCNDBP1-206ENST00000565296 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
CCNDBP1-206ENST00000565296 RPS6KA4O75676 772 aa17.99■□□□□ 0.47
CCNDBP1-206ENST00000565296 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
CCNDBP1-206ENST00000565296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 NBPF26B4DH59 902 aa17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 E9PSI1 815 aa17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 NBPF10Q6P3W6 841 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 TRMT2AQ8IZ69 625 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 NBPF15Q8N660 670 aa17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 RTCBQ9Y3I0 505 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-206ENST00000565296 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
CCNDBP1-206ENST00000565296 PHF14O94880 888 aa17.97■□□□□ 0.47
CCNDBP1-206ENST00000565296 HOXB7P09629 217 aa17.97■□□□□ 0.47
CCNDBP1-206ENST00000565296 SSFA2P28290 1259 aa17.97■□□□□ 0.47
CCNDBP1-206ENST00000565296 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
CCNDBP1-206ENST00000565296 EIF5P55010 431 aaKnown RBP17.96■□□□□ 0.47
CCNDBP1-206ENST00000565296 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
CCNDBP1-206ENST00000565296 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
CCNDBP1-206ENST00000565296 NEFLP07196 543 aa17.95■□□□□ 0.46
CCNDBP1-206ENST00000565296 PDIA6Q15084 440 aa17.95■□□□□ 0.46
CCNDBP1-206ENST00000565296 NECTIN2Q92692 538 aa17.95■□□□□ 0.46
CCNDBP1-206ENST00000565296 UBR3Q6ZT12 1888 aa17.95■□□□□ 0.46
CCNDBP1-206ENST00000565296 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
CCNDBP1-206ENST00000565296 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
CCNDBP1-206ENST00000565296 PROSER3Q2NL68 480 aa17.94■□□□□ 0.46
CCNDBP1-206ENST00000565296 TWISTNBQ3B726 338 aaPredicted RBP17.94■□□□□ 0.46
CCNDBP1-206ENST00000565296 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
CCNDBP1-206ENST00000565296 LRP10Q7Z4F1 713 aa17.94■□□□□ 0.46
CCNDBP1-206ENST00000565296 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
CCNDBP1-206ENST00000565296 ADRA2BP18089 450 aa17.93■□□□□ 0.46
CCNDBP1-206ENST00000565296 HDGFL1Q5TGJ6 251 aa17.93■□□□□ 0.46
CCNDBP1-206ENST00000565296 VAMP4O75379 141 aa17.93■□□□□ 0.46
CCNDBP1-206ENST00000565296 FLAD1Q8NFF5 587 aa17.93■□□□□ 0.46
CCNDBP1-206ENST00000565296 COL15A1P39059 1388 aa17.93■□□□□ 0.46
CCNDBP1-206ENST00000565296 QSER1Q2KHR3 1735 aa17.92■□□□□ 0.46
CCNDBP1-206ENST00000565296 ERBB4Q15303 1308 aa17.92■□□□□ 0.46
CCNDBP1-206ENST00000565296 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
CCNDBP1-206ENST00000565296 ANXA1P04083 346 aa17.92■□□□□ 0.46
CCNDBP1-206ENST00000565296 MYL6BP14649 208 aa17.91■□□□□ 0.46
CCNDBP1-206ENST00000565296 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
CCNDBP1-206ENST00000565296 MSH5O43196 834 aa17.91■□□□□ 0.46
CCNDBP1-206ENST00000565296 SRP68Q9UHB9 627 aaKnown RBP17.91■□□□□ 0.46
CCNDBP1-206ENST00000565296 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
CCNDBP1-206ENST00000565296 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
CCNDBP1-206ENST00000565296 RFC4P35249 363 aa17.9■□□□□ 0.46
CCNDBP1-206ENST00000565296 DDX21Q9NR30 783 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCNDBP1-206ENST00000565296 TSHZ2Q9NRE2 1034 aa17.9■□□□□ 0.46
CCNDBP1-206ENST00000565296 FKBP8Q14318 412 aa17.89■□□□□ 0.45
CCNDBP1-206ENST00000565296 USP42Q9H9J4 1324 aaKnown RBP17.89■□□□□ 0.45
CCNDBP1-206ENST00000565296 DBF4Q9UBU7 674 aaPredicted RBP17.88■□□□□ 0.45
CCNDBP1-206ENST00000565296 TBC1D2BQ9UPU7 963 aa17.88■□□□□ 0.45
CCNDBP1-206ENST00000565296 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
CCNDBP1-206ENST00000565296 BCL2L12Q9HB09 334 aa17.88■□□□□ 0.45
CCNDBP1-206ENST00000565296 NARFQ9UHQ1 456 aa17.88■□□□□ 0.45
CCNDBP1-206ENST00000565296 C4AP0C0L4 1744 aa17.87■□□□□ 0.45
CCNDBP1-206ENST00000565296 GYS1P13807 737 aa17.87■□□□□ 0.45
CCNDBP1-206ENST00000565296 CCDC30Q5VVM6 783 aa17.87■□□□□ 0.45
CCNDBP1-206ENST00000565296 TTLL7Q6ZT98 887 aa17.87■□□□□ 0.45
CCNDBP1-206ENST00000565296 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
CCNDBP1-206ENST00000565296 A0A087WZG4 1122 aa17.86■□□□□ 0.45
CCNDBP1-206ENST00000565296 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
CCNDBP1-206ENST00000565296 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
CCNDBP1-206ENST00000565296 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
CCNDBP1-206ENST00000565296 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
CCNDBP1-206ENST00000565296 DZIP3Q86Y13 1208 aaKnown RBP17.86■□□□□ 0.45
CCNDBP1-206ENST00000565296 XAGE3Q8WTP9 111 aa17.85■□□□□ 0.45
CCNDBP1-206ENST00000565296 ARXQ96QS3 562 aa17.85■□□□□ 0.45
CCNDBP1-206ENST00000565296 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
CCNDBP1-206ENST00000565296 ZPR1O75312 459 aa17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 COPS6Q7L5N1 327 aa17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 PTGER2P43116 358 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms