RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SIRT2Q8IXJ6 389 aa24.55■■□□□ 1.52
CLN6-205ENST00000564846 PI4KAP1Q8N8J0 262 aa24.55■■□□□ 1.52
CLN6-205ENST00000564846 DNAAF4Q8WXU2 420 aa24.55■■□□□ 1.52
CLN6-205ENST00000564846 PAPPAQ13219 1627 aa24.54■■□□□ 1.52
CLN6-205ENST00000564846 ANKRD44Q8N8A2 993 aa24.54■■□□□ 1.52
CLN6-205ENST00000564846 ATP10DQ9P241 1426 aa24.54■■□□□ 1.52
CLN6-205ENST00000564846 TOGARAM1Q9Y4F4 1720 aa24.53■■□□□ 1.52
CLN6-205ENST00000564846 LRP6O75581 1613 aa24.53■■□□□ 1.52
CLN6-205ENST00000564846 DDX58O95786 925 aaKnown RBP24.53■■□□□ 1.52
CLN6-205ENST00000564846 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
CLN6-205ENST00000564846 UNC5CLQ8IV45 518 aa24.53■■□□□ 1.52
CLN6-205ENST00000564846 SRCIN1Q9C0H9 1055 aa24.53■■□□□ 1.52
CLN6-205ENST00000564846 USP16Q9Y5T5 823 aa24.53■■□□□ 1.52
CLN6-205ENST00000564846 ADCY9O60503 1353 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 UBR2Q8IWV8 1755 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 GNAI2P04899 355 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 CEP85Q6P2H3 762 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 KSR2Q6VAB6 950 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 GLI3P10071 1580 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 PDE4AP27815 886 aa24.52■■□□□ 1.52
CLN6-205ENST00000564846 KCPQ6ZWJ8 1503 aa24.51■■□□□ 1.51
CLN6-205ENST00000564846 ERBB4Q15303 1308 aa24.51■■□□□ 1.51
CLN6-205ENST00000564846 BEND3Q5T5X7 828 aa24.51■■□□□ 1.51
CLN6-205ENST00000564846 NGLY1Q96IV0 654 aa24.51■■□□□ 1.51
CLN6-205ENST00000564846 NUCB1Q02818 461 aa24.5■■□□□ 1.51
CLN6-205ENST00000564846 DDB1Q16531 1140 aa24.5■■□□□ 1.51
CLN6-205ENST00000564846 C8orf37Q96NL8 207 aa24.5■■□□□ 1.51
CLN6-205ENST00000564846 CCDC9Q9Y3X0 531 aaKnown RBP24.5■■□□□ 1.51
CLN6-205ENST00000564846 BACH2Q9BYV9 841 aa24.49■■□□□ 1.51
CLN6-205ENST00000564846 LAMB4A4D0S4 1761 aa24.49■■□□□ 1.51
CLN6-205ENST00000564846 USP44Q9H0E7 712 aa24.49■■□□□ 1.51
CLN6-205ENST00000564846 MAP3K2Q9Y2U5 619 aa24.49■■□□□ 1.51
CLN6-205ENST00000564846 FNBP4Q8N3X1 1017 aaPredicted RBP24.48■■□□□ 1.51
CLN6-205ENST00000564846 PIGBQ92521 554 aa24.48■■□□□ 1.51
CLN6-205ENST00000564846 HMMRO75330 724 aa24.47■■□□□ 1.51
CLN6-205ENST00000564846 MYL6BP14649 208 aa24.47■■□□□ 1.51
CLN6-205ENST00000564846 VPS72Q15906 364 aa24.47■■□□□ 1.51
CLN6-205ENST00000564846 DCTPP1Q9H773 170 aa24.47■■□□□ 1.51
CLN6-205ENST00000564846 LRP10Q7Z4F1 713 aa24.47■■□□□ 1.51
CLN6-205ENST00000564846 BCL9LQ86UU0 1499 aa24.46■■□□□ 1.51
CLN6-205ENST00000564846 ALDH1L1O75891 902 aa24.46■■□□□ 1.51
CLN6-205ENST00000564846 UBTFL1P0CB47 393 aaPredicted RBP24.46■■□□□ 1.51
CLN6-205ENST00000564846 CHD1LQ86WJ1 897 aa24.46■■□□□ 1.51
CLN6-205ENST00000564846 BCL9O00512 1426 aa24.45■■□□□ 1.51
CLN6-205ENST00000564846 PTCD1O75127 700 aaKnown RBP24.45■■□□□ 1.5
CLN6-205ENST00000564846 AIMP1Q12904 312 aaKnown RBP24.45■■□□□ 1.5
CLN6-205ENST00000564846 FAM161AQ3B820 660 aa24.45■■□□□ 1.5
CLN6-205ENST00000564846 VSIG10Q8N0Z9 540 aa24.44■■□□□ 1.5
CLN6-205ENST00000564846 XAGE3Q8WTP9 111 aa24.44■■□□□ 1.5
CLN6-205ENST00000564846 COPS6Q7L5N1 327 aa24.44■■□□□ 1.5
CLN6-205ENST00000564846 TEX13AQ9BXU3 409 aaPredicted RBP24.44■■□□□ 1.5
CLN6-205ENST00000564846 ATG3Q9NT62 314 aa24.44■■□□□ 1.5
CLN6-205ENST00000564846 ANKRD45Q5TZF3 282 aa24.43■■□□□ 1.5
CLN6-205ENST00000564846 RIC3Q7Z5B4 369 aa24.43■■□□□ 1.5
CLN6-205ENST00000564846 LINS1Q8NG48 757 aa24.43■■□□□ 1.5
CLN6-205ENST00000564846 ASAP1Q9ULH1 1129 aa24.43■■□□□ 1.5
CLN6-205ENST00000564846 IBTKQ9P2D0 1353 aaPredicted RBP24.42■■□□□ 1.5
CLN6-205ENST00000564846 ITGB4P16144 1822 aa24.42■■□□□ 1.5
CLN6-205ENST00000564846 HSPA1LP34931 641 aa24.42■■□□□ 1.5
CLN6-205ENST00000564846 LRRFIP2Q9Y608 721 aaKnown RBP24.42■■□□□ 1.5
CLN6-205ENST00000564846 LNPKQ9C0E8 428 aa24.41■■□□□ 1.5
CLN6-205ENST00000564846 HDAC5Q9UQL6 1122 aa24.41■■□□□ 1.5
CLN6-205ENST00000564846 ATP8B2P98198 1209 aa24.4■■□□□ 1.5
CLN6-205ENST00000564846 ANKRD13DQ6ZTN6 518 aa24.4■■□□□ 1.5
CLN6-205ENST00000564846 NEXNQ0ZGT2 675 aa24.39■■□□□ 1.5
CLN6-205ENST00000564846 USP21Q9UK80 565 aa24.39■■□□□ 1.5
CLN6-205ENST00000564846 NBPF26B4DH59 902 aa24.39■■□□□ 1.49
CLN6-205ENST00000564846 C8orf34Q49A92 452 aa24.39■■□□□ 1.49
CLN6-205ENST00000564846 NBPF14Q5TI25 921 aa24.39■■□□□ 1.49
CLN6-205ENST00000564846 NBPF10Q6P3W6 841 aaKnown RBP24.39■■□□□ 1.49
CLN6-205ENST00000564846 NBPF15Q8N660 670 aa24.39■■□□□ 1.49
CLN6-205ENST00000564846 MARCH10Q8NA82 808 aaPredicted RBP24.39■■□□□ 1.49
CLN6-205ENST00000564846 METTL22Q9BUU2 404 aaPredicted RBP24.39■■□□□ 1.49
CLN6-205ENST00000564846 NBPF7P0C2Y1 421 aaPredicted RBP24.38■■□□□ 1.49
CLN6-205ENST00000564846 PRIM1P49642 420 aaKnown RBP24.38■■□□□ 1.49
CLN6-205ENST00000564846 SYTL4Q96C24 671 aaPredicted RBP24.38■■□□□ 1.49
CLN6-205ENST00000564846 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.37■■□□□ 1.49
CLN6-205ENST00000564846 PIP4K2AP48426 406 aaPredicted RBP24.37■■□□□ 1.49
CLN6-205ENST00000564846 FAM98CQ17RN3 349 aaKnown RBP24.37■■□□□ 1.49
CLN6-205ENST00000564846 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
CLN6-205ENST00000564846 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
CLN6-205ENST00000564846 MEX3CQ5U5Q3 659 aaKnown RBP24.37■■□□□ 1.49
CLN6-205ENST00000564846 PLBD2Q8NHP8 589 aa24.37■■□□□ 1.49
CLN6-205ENST00000564846 DOT1LQ8TEK3 1739 aa24.36■■□□□ 1.49
CLN6-205ENST00000564846 CWF19L2Q2TBE0 894 aaKnown RBP24.36■■□□□ 1.49
CLN6-205ENST00000564846 UTYO14607 1347 aa24.35■■□□□ 1.49
CLN6-205ENST00000564846 STARD3NLO95772 234 aa24.35■■□□□ 1.49
CLN6-205ENST00000564846 A1BGP04217 495 aa24.35■■□□□ 1.49
CLN6-205ENST00000564846 RBM42Q9BTD8 480 aaKnown RBP24.35■■□□□ 1.49
CLN6-205ENST00000564846 PNMA6EA0A0J9YXQ4 647 aa24.34■■□□□ 1.49
CLN6-205ENST00000564846 GRM8O00222 908 aa24.34■■□□□ 1.49
CLN6-205ENST00000564846 IGKV5-2P06315 115 aa24.34■■□□□ 1.49
CLN6-205ENST00000564846 DNAJC10Q8IXB1 793 aa24.34■■□□□ 1.49
CLN6-205ENST00000564846 SSH3Q8TE77 659 aa24.33■■□□□ 1.49
CLN6-205ENST00000564846 MYD88Q99836 296 aa24.33■■□□□ 1.49
CLN6-205ENST00000564846 NEURL1BA8MQ27 555 aa24.32■■□□□ 1.48
CLN6-205ENST00000564846 PPP1R42Q7Z4L9 355 aa24.31■■□□□ 1.48
CLN6-205ENST00000564846 MTX1Q13505 466 aa24.3■■□□□ 1.48
CLN6-205ENST00000564846 POLA2Q14181 598 aa24.3■■□□□ 1.48
CLN6-205ENST00000564846 GCKRQ14397 625 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms