RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GYS1P13807 737 aa24.23■■□□□ 1.47
SYNGR3-204ENST00000564642 TAF7Q15545 349 aaPredicted RBP24.23■■□□□ 1.47
SYNGR3-204ENST00000564642 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
SYNGR3-204ENST00000564642 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
SYNGR3-204ENST00000564642 NLGN2Q8NFZ4 835 aa24.22■■□□□ 1.47
SYNGR3-204ENST00000564642 ZBTB1Q9Y2K1 713 aa24.22■■□□□ 1.47
SYNGR3-204ENST00000564642 ZPR1O75312 459 aa24.21■■□□□ 1.47
SYNGR3-204ENST00000564642 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
SYNGR3-204ENST00000564642 USP42Q9H9J4 1324 aaKnown RBP24.2■■□□□ 1.46
SYNGR3-204ENST00000564642 RIPK4P57078 832 aa24.2■■□□□ 1.46
SYNGR3-204ENST00000564642 GPR162Q16538 588 aa24.2■■□□□ 1.46
SYNGR3-204ENST00000564642 SRP68Q9UHB9 627 aaKnown RBP24.2■■□□□ 1.46
SYNGR3-204ENST00000564642 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
SYNGR3-204ENST00000564642 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-204ENST00000564642 PNISRQ8TF01 805 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-204ENST00000564642 COL15A1P39059 1388 aa24.18■■□□□ 1.46
SYNGR3-204ENST00000564642 ADAMTS8Q9UP79 889 aa24.18■■□□□ 1.46
SYNGR3-204ENST00000564642 PARP3Q9Y6F1 533 aa24.18■■□□□ 1.46
SYNGR3-204ENST00000564642 SNRPA1P09661 255 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-204ENST00000564642 USPL1Q5W0Q7 1092 aa24.17■■□□□ 1.46
SYNGR3-204ENST00000564642 THUMPD2Q9BTF0 503 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-204ENST00000564642 MIS18AQ9NYP9 233 aa24.17■■□□□ 1.46
SYNGR3-204ENST00000564642 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
SYNGR3-204ENST00000564642 LMOD3Q0VAK6 560 aa24.16■■□□□ 1.46
SYNGR3-204ENST00000564642 NPM2Q86SE8 214 aaKnown RBP24.16■■□□□ 1.46
SYNGR3-204ENST00000564642 RUNDC1Q96C34 613 aa24.16■■□□□ 1.46
SYNGR3-204ENST00000564642 NARFQ9UHQ1 456 aa24.16■■□□□ 1.46
SYNGR3-204ENST00000564642 A0A087WZG4 1122 aa24.15■■□□□ 1.46
SYNGR3-204ENST00000564642 FKBP8Q14318 412 aa24.15■■□□□ 1.46
SYNGR3-204ENST00000564642 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
SYNGR3-204ENST00000564642 A1BGP04217 495 aa24.14■■□□□ 1.45
SYNGR3-204ENST00000564642 EIF5P55010 431 aaKnown RBP24.14■■□□□ 1.45
SYNGR3-204ENST00000564642 NEUROD2Q15784 382 aa24.14■■□□□ 1.45
SYNGR3-204ENST00000564642 ZNF330Q9Y3S2 320 aaPredicted RBP24.14■■□□□ 1.45
SYNGR3-204ENST00000564642 PRAMEF22A3QJZ6 481 aa24.12■■□□□ 1.45
SYNGR3-204ENST00000564642 IL6STP40189 918 aaPredicted RBP24.12■■□□□ 1.45
SYNGR3-204ENST00000564642 RRP7AQ9Y3A4 280 aaKnown RBP24.12■■□□□ 1.45
SYNGR3-204ENST00000564642 KDM3BQ7LBC6 1761 aa24.11■■□□□ 1.45
SYNGR3-204ENST00000564642 ANP32CO43423 234 aa24.11■■□□□ 1.45
SYNGR3-204ENST00000564642 CEP350Q5VT06 3117 aa24.1■■□□□ 1.45
SYNGR3-204ENST00000564642 TM4SF1P30408 202 aa24.09■■□□□ 1.45
SYNGR3-204ENST00000564642 CHD4Q14839 1912 aa24.08■■□□□ 1.45
SYNGR3-204ENST00000564642 KIF13BQ9NQT8 1826 aa24.08■■□□□ 1.45
SYNGR3-204ENST00000564642 TSPYL4Q9UJ04 414 aa24.08■■□□□ 1.45
SYNGR3-204ENST00000564642 TBC1D2BQ9UPU7 963 aa24.08■■□□□ 1.45
SYNGR3-204ENST00000564642 UTRNP46939 3433 aa24.07■■□□□ 1.44
SYNGR3-204ENST00000564642 GRIN3BO60391 1043 aa24.07■■□□□ 1.44
SYNGR3-204ENST00000564642 EIF4A1P60842 406 aaKnown RBP24.07■■□□□ 1.44
SYNGR3-204ENST00000564642 TGFB2P61812 414 aa24.07■■□□□ 1.44
SYNGR3-204ENST00000564642 DDR1Q08345 913 aa24.07■■□□□ 1.44
SYNGR3-204ENST00000564642 POLRMTO00411 1230 aaKnown RBP24.06■■□□□ 1.44
SYNGR3-204ENST00000564642 PIP4K2AP48426 406 aaPredicted RBP24.06■■□□□ 1.44
SYNGR3-204ENST00000564642 BCL2L12Q9HB09 334 aa24.06■■□□□ 1.44
SYNGR3-204ENST00000564642 C10orf71Q711Q0 1435 aa24.05■■□□□ 1.44
SYNGR3-204ENST00000564642 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
SYNGR3-204ENST00000564642 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.441e-6■■■□□ 16.9
SYNGR3-204ENST00000564642 NFIXQ14938 502 aa24.05■■□□□ 1.44
SYNGR3-204ENST00000564642 BABAM1Q9NWV8 329 aa24.05■■□□□ 1.44
SYNGR3-204ENST00000564642 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
SYNGR3-204ENST00000564642 DZIP3Q86Y13 1208 aaKnown RBP24.04■■□□□ 1.44
SYNGR3-204ENST00000564642 WWC3Q9ULE0 1092 aa24.04■■□□□ 1.44
SYNGR3-204ENST00000564642 LAMB4A4D0S4 1761 aa24.03■■□□□ 1.44
SYNGR3-204ENST00000564642 CCDC184Q52MB2 194 aa24.03■■□□□ 1.44
SYNGR3-204ENST00000564642 BICDL1Q6ZP65 573 aa24.03■■□□□ 1.44
SYNGR3-204ENST00000564642 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
SYNGR3-204ENST00000564642 A0A0G2JLW4 131 aa24.02■■□□□ 1.44
SYNGR3-204ENST00000564642 LAS1LQ9Y4W2 734 aaKnown RBP24.02■■□□□ 1.44
SYNGR3-204ENST00000564642 AFDNP55196 1824 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-204ENST00000564642 APAF1O14727 1248 aa24.01■■□□□ 1.43
SYNGR3-204ENST00000564642 SERPINB2P05120 415 aa24.01■■□□□ 1.43
SYNGR3-204ENST00000564642 SCN7AQ01118 1682 aa24.01■■□□□ 1.43
SYNGR3-204ENST00000564642 PXDNLA1KZ92 1463 aa24■■□□□ 1.43
SYNGR3-204ENST00000564642 NBPF26B4DH59 902 aa24■■□□□ 1.43
SYNGR3-204ENST00000564642 CAMTA2O94983 1202 aa24■■□□□ 1.43
SYNGR3-204ENST00000564642 TBC1D9BQ66K14 1250 aa24■■□□□ 1.43
SYNGR3-204ENST00000564642 NBPF10Q6P3W6 841 aaKnown RBP24■■□□□ 1.43
SYNGR3-204ENST00000564642 NBPF15Q8N660 670 aa24■■□□□ 1.43
SYNGR3-204ENST00000564642 KIAA1551Q9HCM1 1747 aa23.99■■□□□ 1.43
SYNGR3-204ENST00000564642 DPEP1P16444 411 aa23.99■■□□□ 1.43
SYNGR3-204ENST00000564642 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
SYNGR3-204ENST00000564642 BCORQ6W2J9 1755 aa23.97■■□□□ 1.43
SYNGR3-204ENST00000564642 SETDB2Q96T68 719 aa23.97■■□□□ 1.43
SYNGR3-204ENST00000564642 ZNF652Q9Y2D9 606 aa23.97■■□□□ 1.43
SYNGR3-204ENST00000564642 NRXN2Q9P2S2 1712 aa23.96■■□□□ 1.43
SYNGR3-204ENST00000564642 CHL1O00533 1208 aa23.96■■□□□ 1.43
SYNGR3-204ENST00000564642 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
SYNGR3-204ENST00000564642 NGEFQ8N5V2 710 aa23.96■■□□□ 1.43
SYNGR3-204ENST00000564642 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
SYNGR3-204ENST00000564642 CARMIL3Q8ND23 1372 aa23.94■■□□□ 1.42
SYNGR3-204ENST00000564642 MYL6BP14649 208 aa23.94■■□□□ 1.42
SYNGR3-204ENST00000564642 EIF2S2P20042 333 aaKnown RBP23.94■■□□□ 1.42
SYNGR3-204ENST00000564642 PIM2Q9P1W9 311 aa23.94■■□□□ 1.42
SYNGR3-204ENST00000564642 NPHP1O15259 732 aa23.93■■□□□ 1.42
SYNGR3-204ENST00000564642 KCNA3P22001 575 aa23.93■■□□□ 1.42
SYNGR3-204ENST00000564642 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-204ENST00000564642 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
SYNGR3-204ENST00000564642 ERBB4Q15303 1308 aa23.92■■□□□ 1.42
SYNGR3-204ENST00000564642 CHRNA5P30532 468 aa23.92■■□□□ 1.42
SYNGR3-204ENST00000564642 CFAP44Q96MT7 982 aa23.92■■□□□ 1.42
SYNGR3-204ENST00000564642 RGL2O15211 777 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms