RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
UBR1-205ENST00000564540 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.81
UBR1-205ENST00000564540 XP32Q5T750 250 aa10.02□□□□□ -0.81
UBR1-205ENST00000564540 VRTNQ9H8Y1 702 aa10.02□□□□□ -0.81
UBR1-205ENST00000564540 GPR25O00155 361 aa10.01□□□□□ -0.81
UBR1-205ENST00000564540 THBS1P07996 1170 aa10.01□□□□□ -0.81
UBR1-205ENST00000564540 PTK7Q13308 1070 aa10.01□□□□□ -0.81
UBR1-205ENST00000564540 LARP1Q6PKG0 1096 aaKnown RBP10.01□□□□□ -0.81
UBR1-205ENST00000564540 TSEN2Q8NCE0 465 aaKnown RBP10.01□□□□□ -0.81
UBR1-205ENST00000564540 RUBCNLQ9H714 662 aa10.01□□□□□ -0.81
UBR1-205ENST00000564540 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
UBR1-205ENST00000564540 PARP3Q9Y6F1 533 aa10.01□□□□□ -0.81
UBR1-205ENST00000564540 SLC9A9Q8IVB4 645 aa10□□□□□ -0.81
UBR1-205ENST00000564540 WHAMMQ8TF30 809 aa10□□□□□ -0.81
UBR1-205ENST00000564540 GTPBP3Q969Y2 492 aaKnown RBP10□□□□□ -0.81
UBR1-205ENST00000564540 AIDAQ96BJ3 306 aa10□□□□□ -0.81
UBR1-205ENST00000564540 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L12C9JPN9 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L21D6R901 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 H7C1W4 665 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 ZDHHC1Q8WTX9 485 aa9.99□□□□□ -0.81
UBR1-205ENST00000564540 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
UBR1-205ENST00000564540 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
UBR1-205ENST00000564540 FAM196BA6NMK8 535 aa9.98□□□□□ -0.81
UBR1-205ENST00000564540 ATP4AP20648 1035 aa9.98□□□□□ -0.81
UBR1-205ENST00000564540 DPYDQ12882 1025 aa9.98□□□□□ -0.81
UBR1-205ENST00000564540 GMCL1Q96IK5 515 aa9.98□□□□□ -0.81
UBR1-205ENST00000564540 TSPAN10Q9H1Z9 355 aaPredicted RBP9.98□□□□□ -0.81
UBR1-205ENST00000564540 M0R2N6 131 aa9.97□□□□□ -0.81
UBR1-205ENST00000564540 LGR5O75473 907 aa9.97□□□□□ -0.81
UBR1-205ENST00000564540 SEC13P55735 322 aa9.97□□□□□ -0.81
UBR1-205ENST00000564540 GAS6Q14393 721 aa9.97□□□□□ -0.81
UBR1-205ENST00000564540 SCARF2Q96GP6 870 aaPredicted RBP9.97□□□□□ -0.81
UBR1-205ENST00000564540 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
UBR1-205ENST00000564540 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.82
UBR1-205ENST00000564540 ANKMY2Q8IV38 441 aa9.96□□□□□ -0.82
UBR1-205ENST00000564540 PGBD3Q8N328 593 aa9.96□□□□□ -0.82
UBR1-205ENST00000564540 TXLNAP40222 546 aa9.95□□□□□ -0.82
UBR1-205ENST00000564540 MARSP56192 900 aaKnown RBP9.95□□□□□ -0.82
UBR1-205ENST00000564540 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
UBR1-205ENST00000564540 L3MBTL2Q969R5 705 aa9.95□□□□□ -0.82
UBR1-205ENST00000564540 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
UBR1-205ENST00000564540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.94□□□□□ -0.82
UBR1-205ENST00000564540 NOS2P35228 1153 aa9.94□□□□□ -0.82
UBR1-205ENST00000564540 TEAD4Q15561 434 aa9.94□□□□□ -0.82
UBR1-205ENST00000564540 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
UBR1-205ENST00000564540 ARXQ96QS3 562 aa9.94□□□□□ -0.82
UBR1-205ENST00000564540 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
UBR1-205ENST00000564540 ZNF232Q9UNY5 417 aa9.94□□□□□ -0.82
UBR1-205ENST00000564540 C21orf2O43822 256 aa9.93□□□□□ -0.82
UBR1-205ENST00000564540 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
UBR1-205ENST00000564540 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
UBR1-205ENST00000564540 HINFPQ9BQA5 517 aa9.93□□□□□ -0.82
UBR1-205ENST00000564540 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
UBR1-205ENST00000564540 SERTM1A2A2V5 107 aa9.92□□□□□ -0.82
UBR1-205ENST00000564540 ADAM23O75077 832 aa9.92□□□□□ -0.82
UBR1-205ENST00000564540 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
UBR1-205ENST00000564540 ARSJQ5FYB0 599 aaPredicted RBP9.92□□□□□ -0.82
UBR1-205ENST00000564540 EFHC2Q5JST6 749 aa9.92□□□□□ -0.82
UBR1-205ENST00000564540 C1orf216Q8TAB5 229 aa9.92□□□□□ -0.82
UBR1-205ENST00000564540 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
UBR1-205ENST00000564540 ZDHHC3Q9NYG2 299 aa9.92□□□□□ -0.82
UBR1-205ENST00000564540 EML1O00423 815 aa9.91□□□□□ -0.82
UBR1-205ENST00000564540 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
UBR1-205ENST00000564540 PSMA6P60900 246 aaKnown RBP9.91□□□□□ -0.82
UBR1-205ENST00000564540 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
UBR1-205ENST00000564540 SCG3Q8WXD2 468 aaKnown RBP9.91□□□□□ -0.82
UBR1-205ENST00000564540 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
UBR1-205ENST00000564540 A0A1W2PNR3 127 aa9.9□□□□□ -0.82
UBR1-205ENST00000564540 PPP1R12BO60237 982 aaPredicted RBP9.9□□□□□ -0.82
UBR1-205ENST00000564540 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
UBR1-205ENST00000564540 KLRG1Q96E93 195 aa9.9□□□□□ -0.82
UBR1-205ENST00000564540 ZIC5Q96T25 663 aa9.9□□□□□ -0.82
UBR1-205ENST00000564540 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.82
UBR1-205ENST00000564540 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
UBR1-205ENST00000564540 BICDL1Q6ZP65 573 aa9.89□□□□□ -0.83
UBR1-205ENST00000564540 FAM200AQ8TCP9 573 aa9.89□□□□□ -0.83
UBR1-205ENST00000564540 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
UBR1-205ENST00000564540 ABHD17AQ96GS6 310 aa9.89□□□□□ -0.83
UBR1-205ENST00000564540 KRTAP4-8Q9BYQ9 185 aa9.89□□□□□ -0.83
UBR1-205ENST00000564540 HCN4Q9Y3Q4 1203 aa9.89□□□□□ -0.83
UBR1-205ENST00000564540 ADAMTS2O95450 1211 aa9.88□□□□□ -0.83
UBR1-205ENST00000564540 ZCCHC2Q9C0B9 1178 aaKnown RBP9.88□□□□□ -0.83
UBR1-205ENST00000564540 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
UBR1-205ENST00000564540 ZMIZ1Q9ULJ6 1067 aa9.88□□□□□ -0.83
UBR1-205ENST00000564540 MSTNO14793 375 aa9.87□□□□□ -0.83
UBR1-205ENST00000564540 BNIP3LO60238 219 aa9.87□□□□□ -0.83
UBR1-205ENST00000564540 POTEAQ6S8J7 498 aa9.87□□□□□ -0.83
UBR1-205ENST00000564540 NLRP8Q86W28 1048 aa9.87□□□□□ -0.83
UBR1-205ENST00000564540 C7orf43Q8WVR3 580 aa9.87□□□□□ -0.83
UBR1-205ENST00000564540 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms