RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.34■■□□□ 1.17
CPNE7-207ENST00000564421 STARD3NLO95772 234 aa22.34■■□□□ 1.17
CPNE7-207ENST00000564421 SNRPA1P09661 255 aaKnown RBP22.34■■□□□ 1.17
CPNE7-207ENST00000564421 ADRA2BP18089 450 aa22.34■■□□□ 1.17
CPNE7-207ENST00000564421 CALD1Q05682 793 aaKnown RBP22.34■■□□□ 1.17
CPNE7-207ENST00000564421 AMIGO3Q86WK7 504 aa22.34■■□□□ 1.17
CPNE7-207ENST00000564421 MTFR1LQ9H019 292 aa22.34■■□□□ 1.17
CPNE7-207ENST00000564421 CCDC87Q9NVE4 849 aa22.34■■□□□ 1.17
CPNE7-207ENST00000564421 EIF4A1P60842 406 aaKnown RBP22.33■■□□□ 1.17
CPNE7-207ENST00000564421 INTS5Q6P9B9 1019 aaKnown RBP22.33■■□□□ 1.17
CPNE7-207ENST00000564421 SPON1Q9HCB6 807 aa22.33■■□□□ 1.17
CPNE7-207ENST00000564421 ZNF521Q96K83 1311 aa22.32■■□□□ 1.16
CPNE7-207ENST00000564421 CHL1O00533 1208 aa22.32■■□□□ 1.16
CPNE7-207ENST00000564421 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
CPNE7-207ENST00000564421 PHF14O94880 888 aa22.31■■□□□ 1.16
CPNE7-207ENST00000564421 ZBTB7AO95365 584 aa22.31■■□□□ 1.16
CPNE7-207ENST00000564421 TRAPPC3LQ5T215 181 aa22.31■■□□□ 1.16
CPNE7-207ENST00000564421 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
CPNE7-207ENST00000564421 MSH5O43196 834 aa22.3■■□□□ 1.16
CPNE7-207ENST00000564421 GIGYF1O75420 1035 aaPredicted RBP22.29■■□□□ 1.16
CPNE7-207ENST00000564421 ZNF853P0CG23 659 aa22.29■■□□□ 1.16
CPNE7-207ENST00000564421 GOLGA2Q08379 1002 aa22.29■■□□□ 1.16
CPNE7-207ENST00000564421 IFT57Q9NWB7 429 aa22.29■■□□□ 1.16
CPNE7-207ENST00000564421 ZBTB1Q9Y2K1 713 aa22.29■■□□□ 1.16
CPNE7-207ENST00000564421 USP16Q9Y5T5 823 aa22.29■■□□□ 1.16
CPNE7-207ENST00000564421 SOS1Q07889 1333 aaPredicted RBP22.29■■□□□ 1.16
CPNE7-207ENST00000564421 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
CPNE7-207ENST00000564421 GNAI1P63096 354 aa22.28■■□□□ 1.16
CPNE7-207ENST00000564421 SMIM5Q71RC9 77 aa22.28■■□□□ 1.16
CPNE7-207ENST00000564421 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
CPNE7-207ENST00000564421 ARHGEF1Q92888 912 aaKnown RBP22.27■■□□□ 1.16
CPNE7-207ENST00000564421 ATF5Q9Y2D1 282 aaPredicted RBP22.27■■□□□ 1.16
CPNE7-207ENST00000564421 PTGER2P43116 358 aa22.26■■□□□ 1.15
CPNE7-207ENST00000564421 SGIP1Q9BQI5 828 aa22.26■■□□□ 1.15
CPNE7-207ENST00000564421 COL15A1P39059 1388 aa22.25■■□□□ 1.15
CPNE7-207ENST00000564421 RFC4P35249 363 aa22.25■■□□□ 1.15
CPNE7-207ENST00000564421 IL6STP40189 918 aaPredicted RBP22.25■■□□□ 1.15
CPNE7-207ENST00000564421 EIF5P55010 431 aaKnown RBP22.25■■□□□ 1.15
CPNE7-207ENST00000564421 CDCA7LQ96GN5 454 aa22.25■■□□□ 1.15
CPNE7-207ENST00000564421 IL16Q14005 1332 aa22.25■■□□□ 1.15
CPNE7-207ENST00000564421 A1BGP04217 495 aa22.24■■□□□ 1.15
CPNE7-207ENST00000564421 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
CPNE7-207ENST00000564421 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
CPNE7-207ENST00000564421 BCORQ6W2J9 1755 aa22.23■■□□□ 1.15
CPNE7-207ENST00000564421 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
CPNE7-207ENST00000564421 E9PSI1 815 aa22.22■■□□□ 1.15
CPNE7-207ENST00000564421 POLD1P28340 1107 aa22.22■■□□□ 1.15
CPNE7-207ENST00000564421 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
CPNE7-207ENST00000564421 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
CPNE7-207ENST00000564421 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
CPNE7-207ENST00000564421 A0A087WZG4 1122 aa22.21■■□□□ 1.15
CPNE7-207ENST00000564421 HOXB7P09629 217 aa22.21■■□□□ 1.15
CPNE7-207ENST00000564421 MYH16Q9H6N6 1097 aa22.2■■□□□ 1.14
CPNE7-207ENST00000564421 NARFQ9UHQ1 456 aa22.2■■□□□ 1.14
CPNE7-207ENST00000564421 ERBB4Q15303 1308 aa22.2■■□□□ 1.14
CPNE7-207ENST00000564421 SRCAPQ6ZRS2 3230 aa22.2■■□□□ 1.14
CPNE7-207ENST00000564421 GYS1P13807 737 aa22.19■■□□□ 1.14
CPNE7-207ENST00000564421 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
CPNE7-207ENST00000564421 NLGN1Q8N2Q7 840 aa22.19■■□□□ 1.14
CPNE7-207ENST00000564421 NBPF26B4DH59 902 aa22.18■■□□□ 1.14
CPNE7-207ENST00000564421 ZPR1O75312 459 aa22.18■■□□□ 1.14
CPNE7-207ENST00000564421 MSL1Q68DK7 614 aa22.18■■□□□ 1.14
CPNE7-207ENST00000564421 NBPF10Q6P3W6 841 aaKnown RBP22.18■■□□□ 1.14
CPNE7-207ENST00000564421 NBPF15Q8N660 670 aa22.18■■□□□ 1.14
CPNE7-207ENST00000564421 PPP1R1BQ9UD71 204 aaPredicted RBP22.18■■□□□ 1.14
CPNE7-207ENST00000564421 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
CPNE7-207ENST00000564421 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
CPNE7-207ENST00000564421 SRP68Q9UHB9 627 aaKnown RBP22.17■■□□□ 1.14
CPNE7-207ENST00000564421 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
CPNE7-207ENST00000564421 NUP98P52948 1817 aa22.16■■□□□ 1.14
CPNE7-207ENST00000564421 TRMT2AQ8IZ69 625 aaKnown RBP22.16■■□□□ 1.14
CPNE7-207ENST00000564421 ARXQ96QS3 562 aa22.16■■□□□ 1.14
CPNE7-207ENST00000564421 FANCIQ9NVI1 1328 aa22.15■■□□□ 1.14
CPNE7-207ENST00000564421 PIP4K2AP48426 406 aaPredicted RBP22.15■■□□□ 1.14
CPNE7-207ENST00000564421 DUSP27Q5VZP5 1158 aa22.15■■□□□ 1.14
CPNE7-207ENST00000564421 USPL1Q5W0Q7 1092 aa22.15■■□□□ 1.14
CPNE7-207ENST00000564421 ZNF330Q9Y3S2 320 aaPredicted RBP22.15■■□□□ 1.14
CPNE7-207ENST00000564421 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.13
CPNE7-207ENST00000564421 AFDNP55196 1824 aaKnown RBP22.14■■□□□ 1.13
CPNE7-207ENST00000564421 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
CPNE7-207ENST00000564421 FKBP8Q14318 412 aa22.12■■□□□ 1.13
CPNE7-207ENST00000564421 DZIP3Q86Y13 1208 aaKnown RBP22.12■■□□□ 1.13
CPNE7-207ENST00000564421 BCL2L12Q9HB09 334 aa22.12■■□□□ 1.13
CPNE7-207ENST00000564421 TBC1D2BQ9UPU7 963 aa22.12■■□□□ 1.13
CPNE7-207ENST00000564421 RGL2O15211 777 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 CAMTA2O94983 1202 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 MMP10P09238 476 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 PDIA6Q15084 440 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 HDGFL1Q5TGJ6 251 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 C8orf58Q8NAV2 365 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 CHMP4AQ9BY43 222 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 NRXN2Q9P2S2 1712 aa22.11■■□□□ 1.13
CPNE7-207ENST00000564421 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
CPNE7-207ENST00000564421 MYL6BP14649 208 aa22.09■■□□□ 1.13
CPNE7-207ENST00000564421 TM4SF1P30408 202 aa22.09■■□□□ 1.13
CPNE7-207ENST00000564421 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
CPNE7-207ENST00000564421 LRP10Q7Z4F1 713 aa22.09■■□□□ 1.13
CPNE7-207ENST00000564421 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
CPNE7-207ENST00000564421 CLEC4GQ6UXB4 293 aa22.08■■□□□ 1.13
CPNE7-207ENST00000564421 NECTIN2Q92692 538 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms