RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 A0A0G2JLW4 131 aa20.04■□□□□ 0.8
SPG7-210ENST00000564409 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
SPG7-210ENST00000564409 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
SPG7-210ENST00000564409 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
SPG7-210ENST00000564409 ADCY9O60503 1353 aa20.04■□□□□ 0.8
SPG7-210ENST00000564409 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
SPG7-210ENST00000564409 A0A087WZG4 1122 aa20.03■□□□□ 0.8
SPG7-210ENST00000564409 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
SPG7-210ENST00000564409 ARFGEF1Q9Y6D6 1849 aa20.03■□□□□ 0.8
SPG7-210ENST00000564409 HEG1Q9ULI3 1381 aa20.03■□□□□ 0.8
SPG7-210ENST00000564409 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
SPG7-210ENST00000564409 DPEP1P16444 411 aa20.02■□□□□ 0.8
SPG7-210ENST00000564409 DDR1Q08345 913 aa20.02■□□□□ 0.8
SPG7-210ENST00000564409 USPL1Q5W0Q7 1092 aa20.02■□□□□ 0.8
SPG7-210ENST00000564409 ZNF496Q96IT1 587 aaPredicted RBP20.02■□□□□ 0.8
SPG7-210ENST00000564409 FMNL2Q96PY5 1086 aa20.02■□□□□ 0.8
SPG7-210ENST00000564409 BCS1LQ9Y276 419 aa20.02■□□□□ 0.8
SPG7-210ENST00000564409 POLRMTO00411 1230 aaKnown RBP20.01■□□□□ 0.79
SPG7-210ENST00000564409 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
SPG7-210ENST00000564409 PIM2Q9P1W9 311 aa20.01■□□□□ 0.79
SPG7-210ENST00000564409 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
SPG7-210ENST00000564409 GPBP1L1Q9HC44 474 aaPredicted RBP20■□□□□ 0.79
SPG7-210ENST00000564409 WWC3Q9ULE0 1092 aa20■□□□□ 0.79
SPG7-210ENST00000564409 BTBD11A6QL63 1104 aa19.99■□□□□ 0.79
SPG7-210ENST00000564409 KCNA3P22001 575 aa19.99■□□□□ 0.79
SPG7-210ENST00000564409 AFDNP55196 1824 aaKnown RBP19.99■□□□□ 0.79
SPG7-210ENST00000564409 NRXN2Q9P2S2 1712 aa19.99■□□□□ 0.79
SPG7-210ENST00000564409 NEFMP07197 916 aa19.98■□□□□ 0.79
SPG7-210ENST00000564409 CANXP27824 592 aaKnown RBP19.98■□□□□ 0.79
SPG7-210ENST00000564409 IL6STP40189 918 aaPredicted RBP19.97■□□□□ 0.79
SPG7-210ENST00000564409 NFIXQ14938 502 aa19.97■□□□□ 0.79
SPG7-210ENST00000564409 DALRD3Q5D0E6 543 aaKnown RBP19.97■□□□□ 0.79
SPG7-210ENST00000564409 NPM2Q86SE8 214 aaKnown RBP19.97■□□□□ 0.79
SPG7-210ENST00000564409 ARHGAP27Q6ZUM4 889 aa19.96■□□□□ 0.79
SPG7-210ENST00000564409 PNNQ9H307 717 aaKnown RBP19.95■□□□□ 0.78
SPG7-210ENST00000564409 BCL2L12Q9HB09 334 aa19.95■□□□□ 0.78
SPG7-210ENST00000564409 SERPINB2P05120 415 aa19.94■□□□□ 0.78
SPG7-210ENST00000564409 SENP3-EIF4A1A0A087X0R7 540 aa19.93■□□□□ 0.78
SPG7-210ENST00000564409 PDZRN3Q9UPQ7 1066 aa19.93■□□□□ 0.78
SPG7-210ENST00000564409 SCN7AQ01118 1682 aa19.93■□□□□ 0.78
SPG7-210ENST00000564409 SNRPA1P09661 255 aaKnown RBP19.92■□□□□ 0.78
SPG7-210ENST00000564409 DLEC1Q9Y238 1755 aa19.92■□□□□ 0.78
SPG7-210ENST00000564409 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
SPG7-210ENST00000564409 MCM10Q7L590 875 aa19.91■□□□□ 0.78
SPG7-210ENST00000564409 DLG5Q8TDM6 1919 aa19.91■□□□□ 0.78
SPG7-210ENST00000564409 KCNQ3O43525 872 aa19.9■□□□□ 0.78
SPG7-210ENST00000564409 A1BGP04217 495 aa19.9■□□□□ 0.78
SPG7-210ENST00000564409 CHRNA5P30532 468 aa19.9■□□□□ 0.78
SPG7-210ENST00000564409 RALBP1Q15311 655 aa19.9■□□□□ 0.78
SPG7-210ENST00000564409 RGL2O15211 777 aa19.89■□□□□ 0.77
SPG7-210ENST00000564409 PNISRQ8TF01 805 aaKnown RBP19.89■□□□□ 0.77
SPG7-210ENST00000564409 ZNF526Q8TF50 670 aaPredicted RBP19.89■□□□□ 0.77
SPG7-210ENST00000564409 TBC1D2BQ9UPU7 963 aa19.89■□□□□ 0.77
SPG7-210ENST00000564409 SBF1O95248 1867 aa19.88■□□□□ 0.77
SPG7-210ENST00000564409 CARMIL3Q8ND23 1372 aa19.88■□□□□ 0.77
SPG7-210ENST00000564409 H0YIN7 160 aa19.88■□□□□ 0.77
SPG7-210ENST00000564409 CLEC4GQ6UXB4 293 aa19.88■□□□□ 0.77
SPG7-210ENST00000564409 ZNF330Q9Y3S2 320 aaPredicted RBP19.88■□□□□ 0.77
SPG7-210ENST00000564409 USP16Q9Y5T5 823 aa19.88■□□□□ 0.77
SPG7-210ENST00000564409 TBC1D9BQ66K14 1250 aa19.87■□□□□ 0.77
SPG7-210ENST00000564409 PLEKHF1Q96S99 279 aa19.87■□□□□ 0.77
SPG7-210ENST00000564409 SETDB2Q96T68 719 aa19.87■□□□□ 0.77
SPG7-210ENST00000564409 BRIP1Q9BX63 1249 aa19.87■□□□□ 0.77
SPG7-210ENST00000564409 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
SPG7-210ENST00000564409 CAMTA2O94983 1202 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 PDE6BP35913 854 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 DCTN1Q14203 1278 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 NFE2L2Q16236 605 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 C9orf131Q5VYM1 1079 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 BICDL1Q6ZP65 573 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 DZIP3Q86Y13 1208 aaKnown RBP19.86■□□□□ 0.77
SPG7-210ENST00000564409 TTLL6Q8N841 843 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 ZNF652Q9Y2D9 606 aa19.86■□□□□ 0.77
SPG7-210ENST00000564409 C2CD5Q86YS7 1000 aa19.85■□□□□ 0.77
SPG7-210ENST00000564409 ANKRD31Q8N7Z5 1873 aa19.84■□□□□ 0.77
SPG7-210ENST00000564409 MAPK8IP3Q9UPT6 1336 aa19.84■□□□□ 0.77
SPG7-210ENST00000564409 ZC3H4Q9UPT8 1303 aaKnown RBP19.84■□□□□ 0.77
SPG7-210ENST00000564409 KIF3CO14782 793 aa19.84■□□□□ 0.77
SPG7-210ENST00000564409 LAMB4A4D0S4 1761 aa19.83■□□□□ 0.77
SPG7-210ENST00000564409 KDM3BQ7LBC6 1761 aa19.83■□□□□ 0.77
SPG7-210ENST00000564409 PRR5LQ6MZQ0 368 aa19.82■□□□□ 0.76
SPG7-210ENST00000564409 CNBD1Q8NA66 436 aa19.82■□□□□ 0.76
SPG7-210ENST00000564409 KDM2BQ8NHM5 1336 aa19.81■□□□□ 0.76
SPG7-210ENST00000564409 NPHP1O15259 732 aa19.81■□□□□ 0.76
SPG7-210ENST00000564409 ST5P78524 1137 aa19.81■□□□□ 0.76
SPG7-210ENST00000564409 RNF181Q9P0P0 153 aa19.81■□□□□ 0.76
SPG7-210ENST00000564409 PRAMEF22A3QJZ6 481 aa19.8■□□□□ 0.76
SPG7-210ENST00000564409 TOMM70O94826 608 aa19.8■□□□□ 0.76
SPG7-210ENST00000564409 HSPA6P17066 643 aa19.8■□□□□ 0.76
SPG7-210ENST00000564409 NBPF26B4DH59 902 aa19.79■□□□□ 0.76
SPG7-210ENST00000564409 LMNB1P20700 586 aa19.79■□□□□ 0.76
SPG7-210ENST00000564409 NBPF10Q6P3W6 841 aaKnown RBP19.79■□□□□ 0.76
SPG7-210ENST00000564409 NBPF15Q8N660 670 aa19.79■□□□□ 0.76
SPG7-210ENST00000564409 CCDC88AQ3V6T2 1871 aa19.79■□□□□ 0.76
SPG7-210ENST00000564409 CNKSR1Q969H4 720 aa19.78■□□□□ 0.76
SPG7-210ENST00000564409 BABAM1Q9NWV8 329 aa19.78■□□□□ 0.76
SPG7-210ENST00000564409 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
SPG7-210ENST00000564409 MYBBP1AQ9BQG0 1328 aaKnown RBP19.77■□□□□ 0.76
SPG7-210ENST00000564409 PIP4K2AP48426 406 aaPredicted RBP19.77■□□□□ 0.76
SPG7-210ENST00000564409 EIF4A1P60842 406 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms