RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 USP42Q9H9J4 1324 aaKnown RBP16.12■□□□□ 0.17
TRAPPC2L-207ENST00000564404 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
TRAPPC2L-207ENST00000564404 BTBD11A6QL63 1104 aa16.11■□□□□ 0.17
TRAPPC2L-207ENST00000564404 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC2L-207ENST00000564404 COL15A1P39059 1388 aa16.11■□□□□ 0.17
TRAPPC2L-207ENST00000564404 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
TRAPPC2L-207ENST00000564404 GRIN3BO60391 1043 aa16.1■□□□□ 0.17
TRAPPC2L-207ENST00000564404 ZPR1O75312 459 aa16.1■□□□□ 0.17
TRAPPC2L-207ENST00000564404 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
TRAPPC2L-207ENST00000564404 DCTN1Q14203 1278 aa16.1■□□□□ 0.17
TRAPPC2L-207ENST00000564404 RALBP1Q15311 655 aa16.1■□□□□ 0.17
TRAPPC2L-207ENST00000564404 STARD3NLO95772 234 aa16.09■□□□□ 0.17
TRAPPC2L-207ENST00000564404 FKBP8Q14318 412 aa16.09■□□□□ 0.17
TRAPPC2L-207ENST00000564404 FMNL2Q96PY5 1086 aa16.09■□□□□ 0.17
TRAPPC2L-207ENST00000564404 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
TRAPPC2L-207ENST00000564404 KCNQ3O43525 872 aa16.08■□□□□ 0.16
TRAPPC2L-207ENST00000564404 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
TRAPPC2L-207ENST00000564404 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC2L-207ENST00000564404 PXDNLA1KZ92 1463 aa16.08■□□□□ 0.16
TRAPPC2L-207ENST00000564404 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
TRAPPC2L-207ENST00000564404 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
TRAPPC2L-207ENST00000564404 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC2L-207ENST00000564404 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
TRAPPC2L-207ENST00000564404 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
TRAPPC2L-207ENST00000564404 ARFGEF1Q9Y6D6 1849 aa16.06■□□□□ 0.16
TRAPPC2L-207ENST00000564404 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
TRAPPC2L-207ENST00000564404 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
TRAPPC2L-207ENST00000564404 NARFQ9UHQ1 456 aa16.06■□□□□ 0.16
TRAPPC2L-207ENST00000564404 BCORQ6W2J9 1755 aa16.05■□□□□ 0.16
TRAPPC2L-207ENST00000564404 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
TRAPPC2L-207ENST00000564404 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC2L-207ENST00000564404 DDR1Q08345 913 aa16.05■□□□□ 0.16
TRAPPC2L-207ENST00000564404 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
TRAPPC2L-207ENST00000564404 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
TRAPPC2L-207ENST00000564404 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
TRAPPC2L-207ENST00000564404 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
TRAPPC2L-207ENST00000564404 TGFB2P61812 414 aa16.04■□□□□ 0.16
TRAPPC2L-207ENST00000564404 NPM2Q86SE8 214 aaKnown RBP16.04■□□□□ 0.16
TRAPPC2L-207ENST00000564404 POLRMTO00411 1230 aaKnown RBP16.03■□□□□ 0.16
TRAPPC2L-207ENST00000564404 A1BGP04217 495 aa16.03■□□□□ 0.16
TRAPPC2L-207ENST00000564404 NFE2L2Q16236 605 aa16.03■□□□□ 0.16
TRAPPC2L-207ENST00000564404 A0A087WZG4 1122 aa16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 DPEP1P16444 411 aa16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 TM4SF1P30408 202 aa16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 BCS1LQ9Y276 419 aa16.02■□□□□ 0.16
TRAPPC2L-207ENST00000564404 DLEC1Q9Y238 1755 aa16.02■□□□□ 0.15
TRAPPC2L-207ENST00000564404 SNRPA1P09661 255 aaKnown RBP16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 NFIXQ14938 502 aa16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 BICDL1Q6ZP65 573 aa16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 TBC1D2BQ9UPU7 963 aa16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 USP16Q9Y5T5 823 aa16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 CACNA1SQ13698 1873 aa16.01■□□□□ 0.15
TRAPPC2L-207ENST00000564404 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
TRAPPC2L-207ENST00000564404 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
TRAPPC2L-207ENST00000564404 SERPINB2P05120 415 aa15.98■□□□□ 0.15
TRAPPC2L-207ENST00000564404 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRAPPC2L-207ENST00000564404 CCDC146Q8IYE0 955 aa15.98■□□□□ 0.15
TRAPPC2L-207ENST00000564404 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
TRAPPC2L-207ENST00000564404 NUP98P52948 1817 aa15.98■□□□□ 0.15
TRAPPC2L-207ENST00000564404 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 CHRNA5P30532 468 aa15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 RIPK4P57078 832 aa15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 TBC1D9BQ66K14 1250 aa15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 DZIP3Q86Y13 1208 aaKnown RBP15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 PIM2Q9P1W9 311 aa15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 SBF1O95248 1867 aa15.97■□□□□ 0.15
TRAPPC2L-207ENST00000564404 KCNA3P22001 575 aa15.96■□□□□ 0.15
TRAPPC2L-207ENST00000564404 ATP10DQ9P241 1426 aa15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 CAMTA2O94983 1202 aa15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
TRAPPC2L-207ENST00000564404 NPHP1O15259 732 aa15.94■□□□□ 0.14
TRAPPC2L-207ENST00000564404 DALRD3Q5D0E6 543 aaKnown RBP15.94■□□□□ 0.14
TRAPPC2L-207ENST00000564404 NBPF26B4DH59 902 aa15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 LMOD3Q0VAK6 560 aa15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 NBPF10Q6P3W6 841 aaKnown RBP15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 NBPF15Q8N660 670 aa15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 ZNF526Q8TF50 670 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 SETDB2Q96T68 719 aa15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
TRAPPC2L-207ENST00000564404 ADCY9O60503 1353 aa15.92■□□□□ 0.14
TRAPPC2L-207ENST00000564404 CCDC24Q8N4L8 307 aa15.92■□□□□ 0.14
TRAPPC2L-207ENST00000564404 ADAMTS8Q9UP79 889 aa15.92■□□□□ 0.14
TRAPPC2L-207ENST00000564404 ZNF652Q9Y2D9 606 aa15.92■□□□□ 0.14
TRAPPC2L-207ENST00000564404 C2CD5Q86YS7 1000 aa15.91■□□□□ 0.14
TRAPPC2L-207ENST00000564404 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
TRAPPC2L-207ENST00000564404 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms