RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
SPG7-209ENST00000564047 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
SPG7-209ENST00000564047 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
SPG7-209ENST00000564047 STK32BQ9NY57 414 aa16.58■□□□□ 0.24
SPG7-209ENST00000564047 UBR2Q8IWV8 1755 aa16.57■□□□□ 0.24
SPG7-209ENST00000564047 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
SPG7-209ENST00000564047 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
SPG7-209ENST00000564047 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
SPG7-209ENST00000564047 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
SPG7-209ENST00000564047 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
SPG7-209ENST00000564047 PTF1AQ7RTS3 328 aa16.56■□□□□ 0.24
SPG7-209ENST00000564047 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
SPG7-209ENST00000564047 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
SPG7-209ENST00000564047 BRPF1P55201 1214 aaPredicted RBP16.55■□□□□ 0.24
SPG7-209ENST00000564047 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
SPG7-209ENST00000564047 TEX13AQ9BXU3 409 aaPredicted RBP16.55■□□□□ 0.24
SPG7-209ENST00000564047 MTFR1LQ9H019 292 aa16.55■□□□□ 0.24
SPG7-209ENST00000564047 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
SPG7-209ENST00000564047 SUPT16HQ9Y5B9 1047 aaKnown RBP16.55■□□□□ 0.24
SPG7-209ENST00000564047 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
SPG7-209ENST00000564047 BCAR3O75815 825 aa16.54■□□□□ 0.24
SPG7-209ENST00000564047 PROM2Q8N271 834 aa16.54■□□□□ 0.24
SPG7-209ENST00000564047 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
SPG7-209ENST00000564047 EIF2S2P20042 333 aaKnown RBP16.53■□□□□ 0.24
SPG7-209ENST00000564047 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
SPG7-209ENST00000564047 BCL2L13Q9BXK5 485 aa16.53■□□□□ 0.24
SPG7-209ENST00000564047 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
SPG7-209ENST00000564047 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
SPG7-209ENST00000564047 LOC102724428A0A0B4J2F2 783 aa16.52■□□□□ 0.24
SPG7-209ENST00000564047 SIK1P57059 783 aa16.52■□□□□ 0.24
SPG7-209ENST00000564047 TXNRD1Q16881 649 aa16.52■□□□□ 0.24
SPG7-209ENST00000564047 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.24
SPG7-209ENST00000564047 SLC4A9Q96Q91 983 aa16.52■□□□□ 0.24
SPG7-209ENST00000564047 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
SPG7-209ENST00000564047 ERBB4Q15303 1308 aa16.51■□□□□ 0.23
SPG7-209ENST00000564047 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
SPG7-209ENST00000564047 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
SPG7-209ENST00000564047 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
SPG7-209ENST00000564047 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
SPG7-209ENST00000564047 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
SPG7-209ENST00000564047 ARXQ96QS3 562 aa16.51■□□□□ 0.23
SPG7-209ENST00000564047 BTAF1O14981 1849 aa16.51■□□□□ 0.23
SPG7-209ENST00000564047 STARD3NLO95772 234 aa16.5■□□□□ 0.23
SPG7-209ENST00000564047 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
SPG7-209ENST00000564047 GPR162Q16538 588 aa16.5■□□□□ 0.23
SPG7-209ENST00000564047 DNAJC10Q8IXB1 793 aa16.5■□□□□ 0.23
SPG7-209ENST00000564047 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
SPG7-209ENST00000564047 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
SPG7-209ENST00000564047 C5P01031 1676 aa16.5■□□□□ 0.23
SPG7-209ENST00000564047 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
SPG7-209ENST00000564047 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
SPG7-209ENST00000564047 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
SPG7-209ENST00000564047 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
SPG7-209ENST00000564047 PDIA6Q15084 440 aa16.48■□□□□ 0.23
SPG7-209ENST00000564047 ARHGAP45Q92619 1136 aa16.48■□□□□ 0.23
SPG7-209ENST00000564047 FRAT1Q92837 279 aaPredicted RBP16.48■□□□□ 0.23
SPG7-209ENST00000564047 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
SPG7-209ENST00000564047 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
SPG7-209ENST00000564047 ZNF831Q5JPB2 1677 aa16.48■□□□□ 0.23
SPG7-209ENST00000564047 LAMB4A4D0S4 1761 aa16.48■□□□□ 0.23
SPG7-209ENST00000564047 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
SPG7-209ENST00000564047 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
SPG7-209ENST00000564047 ITPK1Q13572 414 aa16.47■□□□□ 0.23
SPG7-209ENST00000564047 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
SPG7-209ENST00000564047 PTPRCP08575 1304 aa16.46■□□□□ 0.23
SPG7-209ENST00000564047 TJP1Q07157 1748 aa16.46■□□□□ 0.23
SPG7-209ENST00000564047 PLIN1O60240 522 aa16.46■□□□□ 0.23
SPG7-209ENST00000564047 CCNL1Q9UK58 526 aaPredicted RBP16.46■□□□□ 0.23
SPG7-209ENST00000564047 A1BGP04217 495 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 MS4A1P11836 297 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
SPG7-209ENST00000564047 FLIIQ13045 1269 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 G2E3Q7L622 706 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 API5Q9BZZ5 524 aaKnown RBP16.45■□□□□ 0.22
SPG7-209ENST00000564047 LY75O60449 1722 aa16.45■□□□□ 0.22
SPG7-209ENST00000564047 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
SPG7-209ENST00000564047 NEFLP07196 543 aa16.44■□□□□ 0.22
SPG7-209ENST00000564047 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
SPG7-209ENST00000564047 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
SPG7-209ENST00000564047 LRP10Q7Z4F1 713 aa16.44■□□□□ 0.22
SPG7-209ENST00000564047 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
SPG7-209ENST00000564047 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
SPG7-209ENST00000564047 ANXA1P04083 346 aa16.43■□□□□ 0.22
SPG7-209ENST00000564047 TRIM27P14373 513 aa16.43■□□□□ 0.22
SPG7-209ENST00000564047 MYL6BP14649 208 aa16.43■□□□□ 0.22
SPG7-209ENST00000564047 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
SPG7-209ENST00000564047 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
SPG7-209ENST00000564047 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
SPG7-209ENST00000564047 CRKLP46109 303 aaKnown RBP16.42■□□□□ 0.22
SPG7-209ENST00000564047 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
SPG7-209ENST00000564047 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
SPG7-209ENST00000564047 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
SPG7-209ENST00000564047 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
SPG7-209ENST00000564047 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
SPG7-209ENST00000564047 FKBP5Q13451 457 aaPredicted RBP16.41■□□□□ 0.22
SPG7-209ENST00000564047 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
SPG7-209ENST00000564047 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms