RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 SLC52A2Q9HAB3 445 aa25.71■■□□□ 1.71
SLX1A-204ENST00000563995 DLG5Q8TDM6 1919 aa25.71■■□□□ 1.71
SLX1A-204ENST00000563995 CEMIPQ8WUJ3 1361 aa25.7■■□□□ 1.71
SLX1A-204ENST00000563995 CCER2I3L3R5 266 aa25.7■■□□□ 1.7
SLX1A-204ENST00000563995 RTF1Q92541 710 aaKnown RBP25.7■■□□□ 1.7
SLX1A-204ENST00000563995 NFATC2IPQ8NCF5 419 aa25.69■■□□□ 1.7
SLX1A-204ENST00000563995 SLC4A9Q96Q91 983 aa25.69■■□□□ 1.7
SLX1A-204ENST00000563995 MMP10P09238 476 aa25.68■■□□□ 1.7
SLX1A-204ENST00000563995 TMPOP42166 694 aaKnown RBP25.68■■□□□ 1.7
SLX1A-204ENST00000563995 C10orf71Q711Q0 1435 aa25.68■■□□□ 1.7
SLX1A-204ENST00000563995 ARFGEF1Q9Y6D6 1849 aa25.67■■□□□ 1.7
SLX1A-204ENST00000563995 HTRA3P83110 453 aa25.67■■□□□ 1.7
SLX1A-204ENST00000563995 MCM10Q7L590 875 aa25.67■■□□□ 1.7
SLX1A-204ENST00000563995 SLC34A2O95436 690 aa25.66■■□□□ 1.7
SLX1A-204ENST00000563995 RIPK4P57078 832 aa25.66■■□□□ 1.7
SLX1A-204ENST00000563995 MIER1Q8N108 512 aa25.66■■□□□ 1.7
SLX1A-204ENST00000563995 SIPA1L3O60292 1781 aaPredicted RBP25.65■■□□□ 1.7
SLX1A-204ENST00000563995 TEFQ10587 303 aa25.65■■□□□ 1.7
SLX1A-204ENST00000563995 DCTN1Q14203 1278 aa25.65■■□□□ 1.7
SLX1A-204ENST00000563995 TJP1Q07157 1748 aa25.65■■□□□ 1.7
SLX1A-204ENST00000563995 RRP7AQ9Y3A4 280 aaKnown RBP25.64■■□□□ 1.7
SLX1A-204ENST00000563995 RTCBQ9Y3I0 505 aaKnown RBP25.64■■□□□ 1.7
SLX1A-204ENST00000563995 CNTNAP4Q9C0A0 1308 aa25.63■■□□□ 1.69
SLX1A-204ENST00000563995 TRAPPC3LQ5T215 181 aa25.63■■□□□ 1.69
SLX1A-204ENST00000563995 FAM9BQ8IZU0 186 aa25.63■■□□□ 1.69
SLX1A-204ENST00000563995 APAF1O14727 1248 aa25.62■■□□□ 1.69
SLX1A-204ENST00000563995 ADRA2BP18089 450 aa25.62■■□□□ 1.69
SLX1A-204ENST00000563995 TGFB2P61812 414 aa25.62■■□□□ 1.69
SLX1A-204ENST00000563995 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
SLX1A-204ENST00000563995 RC3H1Q5TC82 1133 aaKnown RBP25.62■■□□□ 1.69
SLX1A-204ENST00000563995 NEUROD2Q15784 382 aa25.61■■□□□ 1.69
SLX1A-204ENST00000563995 NLGN1Q8N2Q7 840 aa25.61■■□□□ 1.69
SLX1A-204ENST00000563995 RBM46Q8TBY0 533 aaKnown RBP25.61■■□□□ 1.69
SLX1A-204ENST00000563995 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
SLX1A-204ENST00000563995 RBM42Q9BTD8 480 aaKnown RBP25.61■■□□□ 1.69
SLX1A-204ENST00000563995 NMRK2Q9NPI5 230 aa25.61■■□□□ 1.69
SLX1A-204ENST00000563995 GYS1P13807 737 aa25.59■■□□□ 1.69
SLX1A-204ENST00000563995 THUMPD2Q9BTF0 503 aaKnown RBP25.58■■□□□ 1.69
SLX1A-204ENST00000563995 TRIM35Q9UPQ4 493 aa25.58■■□□□ 1.69
SLX1A-204ENST00000563995 A0A0G2JLW4 131 aa25.57■■□□□ 1.68
SLX1A-204ENST00000563995 RPS6KA4O75676 772 aa25.57■■□□□ 1.68
SLX1A-204ENST00000563995 SLC39A6Q13433 755 aa25.57■■□□□ 1.68
SLX1A-204ENST00000563995 BCS1LQ9Y276 419 aa25.56■■□□□ 1.68
SLX1A-204ENST00000563995 KCPQ6ZWJ8 1503 aa25.55■■□□□ 1.68
SLX1A-204ENST00000563995 BTBD11A6QL63 1104 aa25.55■■□□□ 1.68
SLX1A-204ENST00000563995 C16orf71Q8IYS4 520 aaPredicted RBP25.55■■□□□ 1.68
SLX1A-204ENST00000563995 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
SLX1A-204ENST00000563995 SBF1O95248 1867 aa25.55■■□□□ 1.68
SLX1A-204ENST00000563995 UBR2Q8IWV8 1755 aa25.54■■□□□ 1.68
SLX1A-204ENST00000563995 RFC4P35249 363 aa25.54■■□□□ 1.68
SLX1A-204ENST00000563995 FSTL1Q12841 308 aa25.54■■□□□ 1.68
SLX1A-204ENST00000563995 TAF7Q15545 349 aaPredicted RBP25.54■■□□□ 1.68
SLX1A-204ENST00000563995 ZNF790Q6PG37 636 aa25.54■■□□□ 1.68
SLX1A-204ENST00000563995 PTCD1O75127 700 aaKnown RBP25.53■■□□□ 1.68
SLX1A-204ENST00000563995 DPEP1P16444 411 aa25.53■■□□□ 1.68
SLX1A-204ENST00000563995 TTC5Q8N0Z6 440 aa25.53■■□□□ 1.68
SLX1A-204ENST00000563995 KCNA3P22001 575 aa25.51■■□□□ 1.67
SLX1A-204ENST00000563995 PARP3Q9Y6F1 533 aa25.51■■□□□ 1.67
SLX1A-204ENST00000563995 AFDNP55196 1824 aaKnown RBP25.51■■□□□ 1.67
SLX1A-204ENST00000563995 NCBP3Q53F19 620 aaKnown RBP25.5■■□□□ 1.67
SLX1A-204ENST00000563995 KCNQ3O43525 872 aa25.49■■□□□ 1.67
SLX1A-204ENST00000563995 CRKLP46109 303 aaKnown RBP25.49■■□□□ 1.67
SLX1A-204ENST00000563995 KDM3BQ7LBC6 1761 aa25.49■■□□□ 1.67
SLX1A-204ENST00000563995 USP42Q9H9J4 1324 aaKnown RBP25.48■■□□□ 1.67
SLX1A-204ENST00000563995 HSPA1AP0DMV8 641 aaKnown RBP25.48■■□□□ 1.67
SLX1A-204ENST00000563995 HSPA1BP0DMV9 641 aaKnown RBP25.48■■□□□ 1.67
SLX1A-204ENST00000563995 CCDC27Q2M243 656 aa25.48■■□□□ 1.67
SLX1A-204ENST00000563995 ARHGAP27Q6ZUM4 889 aa25.48■■□□□ 1.67
SLX1A-204ENST00000563995 DLEC1Q9Y238 1755 aa25.47■■□□□ 1.67
SLX1A-204ENST00000563995 VSIG10Q8N0Z9 540 aa25.47■■□□□ 1.67
SLX1A-204ENST00000563995 ZNF496Q96IT1 587 aaPredicted RBP25.47■■□□□ 1.67
SLX1A-204ENST00000563995 MIS18AQ9NYP9 233 aa25.47■■□□□ 1.67
SLX1A-204ENST00000563995 SRP68Q9UHB9 627 aaKnown RBP25.47■■□□□ 1.67
SLX1A-204ENST00000563995 NRXN2Q9P2S2 1712 aa25.46■■□□□ 1.67
SLX1A-204ENST00000563995 FMNL2Q96PY5 1086 aa25.46■■□□□ 1.67
SLX1A-204ENST00000563995 BABAM1Q9NWV8 329 aa25.46■■□□□ 1.67
SLX1A-204ENST00000563995 HEG1Q9ULI3 1381 aa25.45■■□□□ 1.67
SLX1A-204ENST00000563995 DDR1Q08345 913 aa25.45■■□□□ 1.66
SLX1A-204ENST00000563995 FKBP8Q14318 412 aa25.45■■□□□ 1.66
SLX1A-204ENST00000563995 TNRC6CQ9HCJ0 1690 aaKnown RBP25.45■■□□□ 1.66
SLX1A-204ENST00000563995 CALD1Q05682 793 aaKnown RBP25.44■■□□□ 1.66
SLX1A-204ENST00000563995 TSPYL4Q9UJ04 414 aa25.44■■□□□ 1.66
SLX1A-204ENST00000563995 INTS5Q6P9B9 1019 aaKnown RBP25.43■■□□□ 1.66
SLX1A-204ENST00000563995 WWC1Q8IX03 1113 aa25.43■■□□□ 1.66
SLX1A-204ENST00000563995 NGEFQ8N5V2 710 aa25.43■■□□□ 1.66
SLX1A-204ENST00000563995 DNAJC10Q8IXB1 793 aa25.42■■□□□ 1.66
SLX1A-204ENST00000563995 PIM2Q9P1W9 311 aa25.42■■□□□ 1.66
SLX1A-204ENST00000563995 CHL1O00533 1208 aa25.41■■□□□ 1.66
SLX1A-204ENST00000563995 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
SLX1A-204ENST00000563995 CFAP44Q96MT7 982 aa25.41■■□□□ 1.66
SLX1A-204ENST00000563995 POLRMTO00411 1230 aaKnown RBP25.4■■□□□ 1.66
SLX1A-204ENST00000563995 SALL2Q9Y467 1007 aaPredicted RBP25.4■■□□□ 1.66
SLX1A-204ENST00000563995 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
SLX1A-204ENST00000563995 CCDC88AQ3V6T2 1871 aa25.4■■□□□ 1.66
SLX1A-204ENST00000563995 PCNTO95613 3336 aa25.4■■□□□ 1.66
SLX1A-204ENST00000563995 ZNF853P0CG23 659 aa25.39■■□□□ 1.66
SLX1A-204ENST00000563995 EIF4A1P60842 406 aaKnown RBP25.39■■□□□ 1.66
SLX1A-204ENST00000563995 IFT57Q9NWB7 429 aa25.39■■□□□ 1.66
SLX1A-204ENST00000563995 TM4SF1P30408 202 aa25.38■■□□□ 1.65
SLX1A-204ENST00000563995 TEX13AQ9BXU3 409 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms