RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 NEUROD2Q15784 382 aa26.69■■□□□ 1.86
CMTM3-206ENST00000563672 ZBTB1Q9Y2K1 713 aa26.69■■□□□ 1.86
CMTM3-206ENST00000563672 SOS1Q07889 1333 aaPredicted RBP26.68■■□□□ 1.86
CMTM3-206ENST00000563672 RFC4P35249 363 aa26.68■■□□□ 1.86
CMTM3-206ENST00000563672 FHDC1Q9C0D6 1143 aaPredicted RBP26.68■■□□□ 1.86
CMTM3-206ENST00000563672 MRS2Q9HD23 443 aa26.68■■□□□ 1.86
CMTM3-206ENST00000563672 TRIM35Q9UPQ4 493 aa26.68■■□□□ 1.86
CMTM3-206ENST00000563672 SNRPA1P09661 255 aaKnown RBP26.66■■□□□ 1.86
CMTM3-206ENST00000563672 SYT17Q9BSW7 474 aa26.66■■□□□ 1.86
CMTM3-206ENST00000563672 GYS1P13807 737 aa26.65■■□□□ 1.86
CMTM3-206ENST00000563672 USP16Q9Y5T5 823 aa26.65■■□□□ 1.86
CMTM3-206ENST00000563672 PRAMEF22A3QJZ6 481 aa26.64■■□□□ 1.86
CMTM3-206ENST00000563672 APAF1O14727 1248 aa26.64■■□□□ 1.86
CMTM3-206ENST00000563672 NLGN1Q8N2Q7 840 aa26.64■■□□□ 1.86
CMTM3-206ENST00000563672 CANXP27824 592 aaKnown RBP26.63■■□□□ 1.85
CMTM3-206ENST00000563672 BABAM1Q9NWV8 329 aa26.63■■□□□ 1.85
CMTM3-206ENST00000563672 USP42Q9H9J4 1324 aaKnown RBP26.63■■□□□ 1.85
CMTM3-206ENST00000563672 EIF5P55010 431 aaKnown RBP26.62■■□□□ 1.85
CMTM3-206ENST00000563672 EIF4A1P60842 406 aaKnown RBP26.62■■□□□ 1.85
CMTM3-206ENST00000563672 SRP68Q9UHB9 627 aaKnown RBP26.62■■□□□ 1.85
CMTM3-206ENST00000563672 A1BGP04217 495 aa26.61■■□□□ 1.85
CMTM3-206ENST00000563672 COL15A1P39059 1388 aa26.6■■□□□ 1.85
CMTM3-206ENST00000563672 TSPYL4Q9UJ04 414 aa26.6■■□□□ 1.85
CMTM3-206ENST00000563672 KDM3BQ7LBC6 1761 aa26.6■■□□□ 1.85
CMTM3-206ENST00000563672 GIGYF1O75420 1035 aaPredicted RBP26.59■■□□□ 1.85
CMTM3-206ENST00000563672 IL6STP40189 918 aaPredicted RBP26.59■■□□□ 1.85
CMTM3-206ENST00000563672 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
CMTM3-206ENST00000563672 MMP10P09238 476 aa26.58■■□□□ 1.85
CMTM3-206ENST00000563672 NARFQ9UHQ1 456 aa26.58■■□□□ 1.85
CMTM3-206ENST00000563672 CHL1O00533 1208 aa26.57■■□□□ 1.84
CMTM3-206ENST00000563672 ZPR1O75312 459 aa26.57■■□□□ 1.84
CMTM3-206ENST00000563672 A0A087WZG4 1122 aa26.56■■□□□ 1.84
CMTM3-206ENST00000563672 FKBP8Q14318 412 aa26.56■■□□□ 1.84
CMTM3-206ENST00000563672 USPL1Q5W0Q7 1092 aa26.56■■□□□ 1.84
CMTM3-206ENST00000563672 KLHL34Q8N239 644 aa26.55■■□□□ 1.84
CMTM3-206ENST00000563672 CD2APQ9Y5K6 639 aa26.54■■□□□ 1.84
CMTM3-206ENST00000563672 NBPF26B4DH59 902 aa26.53■■□□□ 1.84
CMTM3-206ENST00000563672 NBPF10Q6P3W6 841 aaKnown RBP26.53■■□□□ 1.84
CMTM3-206ENST00000563672 NBPF15Q8N660 670 aa26.53■■□□□ 1.84
CMTM3-206ENST00000563672 BCL2L12Q9HB09 334 aa26.53■■□□□ 1.84
CMTM3-206ENST00000563672 TM4SF1P30408 202 aa26.52■■□□□ 1.84
CMTM3-206ENST00000563672 PIP4K2AP48426 406 aaPredicted RBP26.52■■□□□ 1.84
CMTM3-206ENST00000563672 NLGN2Q8NFZ4 835 aa26.51■■□□□ 1.83
CMTM3-206ENST00000563672 CFAP44Q96MT7 982 aa26.51■■□□□ 1.83
CMTM3-206ENST00000563672 ZNF330Q9Y3S2 320 aaPredicted RBP26.51■■□□□ 1.83
CMTM3-206ENST00000563672 ZNF853P0CG23 659 aa26.5■■□□□ 1.83
CMTM3-206ENST00000563672 NCBP3Q53F19 620 aaKnown RBP26.5■■□□□ 1.83
CMTM3-206ENST00000563672 TBC1D2BQ9UPU7 963 aa26.5■■□□□ 1.83
CMTM3-206ENST00000563672 LAS1LQ9Y4W2 734 aaKnown RBP26.5■■□□□ 1.83
CMTM3-206ENST00000563672 DDR1Q08345 913 aa26.49■■□□□ 1.83
CMTM3-206ENST00000563672 CCDC27Q2M243 656 aa26.49■■□□□ 1.83
CMTM3-206ENST00000563672 PARP3Q9Y6F1 533 aa26.49■■□□□ 1.83
CMTM3-206ENST00000563672 CALD1Q05682 793 aaKnown RBP26.48■■□□□ 1.83
CMTM3-206ENST00000563672 NPM2Q86SE8 214 aaKnown RBP26.48■■□□□ 1.83
CMTM3-206ENST00000563672 IFT57Q9NWB7 429 aa26.47■■□□□ 1.83
CMTM3-206ENST00000563672 POLRMTO00411 1230 aaKnown RBP26.46■■□□□ 1.83
CMTM3-206ENST00000563672 CAMTA2O94983 1202 aa26.46■■□□□ 1.83
CMTM3-206ENST00000563672 NFIXQ14938 502 aa26.46■■□□□ 1.83
CMTM3-206ENST00000563672 DZIP3Q86Y13 1208 aaKnown RBP26.46■■□□□ 1.83
CMTM3-206ENST00000563672 FAM9BQ8IZU0 186 aa26.46■■□□□ 1.83
CMTM3-206ENST00000563672 MBIPQ9NS73 344 aa26.45■■□□□ 1.82
CMTM3-206ENST00000563672 LAMB4A4D0S4 1761 aa26.45■■□□□ 1.82
CMTM3-206ENST00000563672 SENP3-EIF4A1A0A087X0R7 540 aa26.44■■□□□ 1.82
CMTM3-206ENST00000563672 DCAF8L1A6NGE4 600 aa26.44■■□□□ 1.82
CMTM3-206ENST00000563672 GNAI1P63096 354 aa26.44■■□□□ 1.82
CMTM3-206ENST00000563672 KRT24Q2M2I5 525 aa26.44■■□□□ 1.82
CMTM3-206ENST00000563672 WWC1Q8IX03 1113 aa26.44■■□□□ 1.82
CMTM3-206ENST00000563672 ERBB4Q15303 1308 aa26.43■■□□□ 1.82
CMTM3-206ENST00000563672 C10orf71Q711Q0 1435 aa26.42■■□□□ 1.82
CMTM3-206ENST00000563672 EIF2S2P20042 333 aaKnown RBP26.41■■□□□ 1.82
CMTM3-206ENST00000563672 PDIA6Q15084 440 aa26.41■■□□□ 1.82
CMTM3-206ENST00000563672 TBC1D9BQ66K14 1250 aa26.41■■□□□ 1.82
CMTM3-206ENST00000563672 RGL2O15211 777 aa26.4■■□□□ 1.82
CMTM3-206ENST00000563672 CLEC4GQ6UXB4 293 aa26.4■■□□□ 1.82
CMTM3-206ENST00000563672 SCN7AQ01118 1682 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 CCER2I3L3R5 266 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 HOXB7P09629 217 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 MYL6BP14649 208 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 TGFB2P61812 414 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 BICDL1Q6ZP65 573 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 LRP10Q7Z4F1 713 aa26.39■■□□□ 1.82
CMTM3-206ENST00000563672 SERPINB2P05120 415 aa26.38■■□□□ 1.81
CMTM3-206ENST00000563672 NGEFQ8N5V2 710 aa26.37■■□□□ 1.81
CMTM3-206ENST00000563672 IL16Q14005 1332 aa26.37■■□□□ 1.81
CMTM3-206ENST00000563672 GPR162Q16538 588 aa26.36■■□□□ 1.81
CMTM3-206ENST00000563672 DUSP27Q5VZP5 1158 aa26.36■■□□□ 1.81
CMTM3-206ENST00000563672 KIF13BQ9NQT8 1826 aa26.36■■□□□ 1.81
CMTM3-206ENST00000563672 PROSER3Q2NL68 480 aa26.35■■□□□ 1.81
CMTM3-206ENST00000563672 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
CMTM3-206ENST00000563672 ZNF652Q9Y2D9 606 aa26.35■■□□□ 1.81
CMTM3-206ENST00000563672 PXDNLA1KZ92 1463 aa26.35■■□□□ 1.81
CMTM3-206ENST00000563672 ERVV-1B6SEH8 477 aa26.34■■□□□ 1.81
CMTM3-206ENST00000563672 HLFQ16534 295 aa26.34■■□□□ 1.81
CMTM3-206ENST00000563672 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
CMTM3-206ENST00000563672 NECTIN2Q92692 538 aa26.34■■□□□ 1.81
CMTM3-206ENST00000563672 SETDB2Q96T68 719 aa26.34■■□□□ 1.81
CMTM3-206ENST00000563672 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
CMTM3-206ENST00000563672 UTRNP46939 3433 aa26.34■■□□□ 1.81
CMTM3-206ENST00000563672 BCORQ6W2J9 1755 aa26.33■■□□□ 1.81
CMTM3-206ENST00000563672 A0A0G2JLW4 131 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms