RNA–Protein interactions for RNA: ENST00000563332.6

CDIP1-205, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-205ENST00000563332 MCM4P33991 863 aa17.8■□□□□ 0.44
CDIP1-205ENST00000563332 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
CDIP1-205ENST00000563332 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
CDIP1-205ENST00000563332 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
CDIP1-205ENST00000563332 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
CDIP1-205ENST00000563332 CASC1Q6TDU7 716 aa17.79■□□□□ 0.44
CDIP1-205ENST00000563332 KDM6AO15550 1401 aaPredicted RBP17.79■□□□□ 0.44
CDIP1-205ENST00000563332 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
CDIP1-205ENST00000563332 CYP27B1O15528 508 aa17.79■□□□□ 0.44
CDIP1-205ENST00000563332 PHKG2P15735 406 aa17.79■□□□□ 0.44
CDIP1-205ENST00000563332 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
CDIP1-205ENST00000563332 ZNF790Q6PG37 636 aa17.78■□□□□ 0.44
CDIP1-205ENST00000563332 PHRF1Q9P1Y6 1649 aaKnown RBP17.78■□□□□ 0.44
CDIP1-205ENST00000563332 ERC2O15083 957 aa17.78■□□□□ 0.44
CDIP1-205ENST00000563332 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
CDIP1-205ENST00000563332 TNPO1Q92973 898 aaKnown RBP17.78■□□□□ 0.44
CDIP1-205ENST00000563332 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
CDIP1-205ENST00000563332 AK9Q5TCS8 1911 aa17.77■□□□□ 0.44
CDIP1-205ENST00000563332 CADPS2Q86UW7 1296 aa17.77■□□□□ 0.44
CDIP1-205ENST00000563332 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.44
CDIP1-205ENST00000563332 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
CDIP1-205ENST00000563332 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
CDIP1-205ENST00000563332 CACNA1FO60840 1977 aa17.77■□□□□ 0.44
CDIP1-205ENST00000563332 DDIT3P35638 169 aa17.77■□□□□ 0.43
CDIP1-205ENST00000563332 PDIA6Q15084 440 aa17.77■□□□□ 0.43
CDIP1-205ENST00000563332 OSBPL3Q9H4L5 887 aa17.77■□□□□ 0.43
CDIP1-205ENST00000563332 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.43
CDIP1-205ENST00000563332 ANO2Q9NQ90 1003 aa17.77■□□□□ 0.43
CDIP1-205ENST00000563332 USP16Q9Y5T5 823 aa17.77■□□□□ 0.43
CDIP1-205ENST00000563332 SSFA2P28290 1259 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 HOXB7P09629 217 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 POLA2Q14181 598 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 SIL1Q9H173 461 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 ZNF335Q9H4Z2 1342 aaPredicted RBP17.76■□□□□ 0.43
CDIP1-205ENST00000563332 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
CDIP1-205ENST00000563332 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
CDIP1-205ENST00000563332 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
CDIP1-205ENST00000563332 XAGE3Q8WTP9 111 aa17.75■□□□□ 0.43
CDIP1-205ENST00000563332 ESYT1Q9BSJ8 1104 aa17.75■□□□□ 0.43
CDIP1-205ENST00000563332 KIF1AQ12756 1690 aa17.75■□□□□ 0.43
CDIP1-205ENST00000563332 CHMLP26374 656 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 PKP1Q13835 747 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 SUCLG2Q96I99 432 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 SPATA31A3Q5VYP0 1347 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 COPS6Q7L5N1 327 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 ZGPATQ8N5A5 531 aaKnown RBP17.74■□□□□ 0.43
CDIP1-205ENST00000563332 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
CDIP1-205ENST00000563332 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 RABEP1Q15276 862 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
CDIP1-205ENST00000563332 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
CDIP1-205ENST00000563332 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 REC8O95072 547 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 MYD88Q99836 296 aa17.73■□□□□ 0.43
CDIP1-205ENST00000563332 BICC1Q9H694 974 aaKnown RBP17.73■□□□□ 0.43
CDIP1-205ENST00000563332 DTNBO60941 627 aa17.72■□□□□ 0.43
CDIP1-205ENST00000563332 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
CDIP1-205ENST00000563332 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
CDIP1-205ENST00000563332 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDIP1-205ENST00000563332 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
CDIP1-205ENST00000563332 PTCD1O75127 700 aaKnown RBP17.71■□□□□ 0.43
CDIP1-205ENST00000563332 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
CDIP1-205ENST00000563332 PI4K2BQ8TCG2 481 aa17.71■□□□□ 0.43
CDIP1-205ENST00000563332 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
CDIP1-205ENST00000563332 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
CDIP1-205ENST00000563332 TRAK2O60296 914 aa17.71■□□□□ 0.43
CDIP1-205ENST00000563332 NEK4P51957 841 aa17.71■□□□□ 0.43
CDIP1-205ENST00000563332 DDX54Q8TDD1 881 aaKnown RBP17.71■□□□□ 0.43
CDIP1-205ENST00000563332 EPHA10Q5JZY3 1008 aa17.7■□□□□ 0.42
CDIP1-205ENST00000563332 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
CDIP1-205ENST00000563332 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
CDIP1-205ENST00000563332 CABP4P57796 275 aa17.7■□□□□ 0.42
CDIP1-205ENST00000563332 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
CDIP1-205ENST00000563332 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
CDIP1-205ENST00000563332 C5P01031 1676 aa17.7■□□□□ 0.42
CDIP1-205ENST00000563332 GRM8O00222 908 aa17.69■□□□□ 0.42
CDIP1-205ENST00000563332 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
CDIP1-205ENST00000563332 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
CDIP1-205ENST00000563332 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
CDIP1-205ENST00000563332 TLR7Q9NYK1 1049 aaKnown RBP17.68■□□□□ 0.42
CDIP1-205ENST00000563332 CWC27Q6UX04 472 aaKnown RBP17.68■□□□□ 0.42
CDIP1-205ENST00000563332 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
CDIP1-205ENST00000563332 COL18A1P39060 1754 aa17.68■□□□□ 0.42
CDIP1-205ENST00000563332 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
CDIP1-205ENST00000563332 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
CDIP1-205ENST00000563332 RAB11FIP3O75154 756 aa17.68■□□□□ 0.42
CDIP1-205ENST00000563332 LINS1Q8NG48 757 aa17.68■□□□□ 0.42
CDIP1-205ENST00000563332 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
CDIP1-205ENST00000563332 AACSQ86V21 672 aa17.67■□□□□ 0.42
CDIP1-205ENST00000563332 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
CDIP1-205ENST00000563332 DCAF5Q96JK2 942 aa17.66■□□□□ 0.42
CDIP1-205ENST00000563332 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
CDIP1-205ENST00000563332 KDM4FA0A1W2PPD8 638 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms