RNA–Protein interactions for RNA: ENST00000562441.5

INO80E-205, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-205ENST00000562441 USP16Q9Y5T5 823 aa23.51■■□□□ 1.35
INO80E-205ENST00000562441 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
INO80E-205ENST00000562441 PSDA5PKW4 1024 aaPredicted RBP23.5■■□□□ 1.35
INO80E-205ENST00000562441 HNRNPUQ00839 825 aaKnown RBP eCLIP23.5■■□□□ 1.351e-7■■□□□ 13.2
INO80E-205ENST00000562441 SMIM5Q71RC9 77 aa23.5■■□□□ 1.35
INO80E-205ENST00000562441 PNPLA7Q6ZV29 1317 aa23.5■■□□□ 1.35
INO80E-205ENST00000562441 RC3H1Q5TC82 1133 aaKnown RBP23.5■■□□□ 1.35
INO80E-205ENST00000562441 PDGFDQ9GZP0 370 aaPredicted RBP23.5■■□□□ 1.35
INO80E-205ENST00000562441 AK7Q96M32 723 aa23.49■■□□□ 1.35
INO80E-205ENST00000562441 CCDC87Q9NVE4 849 aa23.49■■□□□ 1.35
INO80E-205ENST00000562441 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
INO80E-205ENST00000562441 GNPATO15228 680 aa23.48■■□□□ 1.35
INO80E-205ENST00000562441 TEX13AQ9BXU3 409 aaPredicted RBP23.48■■□□□ 1.35
INO80E-205ENST00000562441 TFCP2L1Q9NZI6 479 aa23.47■■□□□ 1.35
INO80E-205ENST00000562441 STARD3NLO95772 234 aa23.46■■□□□ 1.35
INO80E-205ENST00000562441 C8orf58Q8NAV2 365 aa23.46■■□□□ 1.35
INO80E-205ENST00000562441 CDCA7LQ96GN5 454 aa23.46■■□□□ 1.35
INO80E-205ENST00000562441 SOS1Q07889 1333 aaPredicted RBP23.45■■□□□ 1.34
INO80E-205ENST00000562441 A1BGP04217 495 aa23.45■■□□□ 1.34
INO80E-205ENST00000562441 HMGB2P26583 209 aaKnown RBP23.45■■□□□ 1.34
INO80E-205ENST00000562441 GOLGA2Q08379 1002 aa23.45■■□□□ 1.34
INO80E-205ENST00000562441 RPS6KA4O75676 772 aa23.44■■□□□ 1.34
INO80E-205ENST00000562441 TSPYL6Q8N831 410 aa23.44■■□□□ 1.34
INO80E-205ENST00000562441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.43■■□□□ 1.34
INO80E-205ENST00000562441 NBPF26B4DH59 902 aa23.43■■□□□ 1.34
INO80E-205ENST00000562441 PIP4K2AP48426 406 aaPredicted RBP23.43■■□□□ 1.34
INO80E-205ENST00000562441 SLFN5Q08AF3 891 aa23.43■■□□□ 1.34
INO80E-205ENST00000562441 DUSP27Q5VZP5 1158 aa23.43■■□□□ 1.34
INO80E-205ENST00000562441 NBPF10Q6P3W6 841 aaKnown RBP23.43■■□□□ 1.34
INO80E-205ENST00000562441 NBPF15Q8N660 670 aa23.43■■□□□ 1.34
INO80E-205ENST00000562441 COL24A1Q17RW2 1714 aa23.43■■□□□ 1.34
INO80E-205ENST00000562441 SRCAPQ6ZRS2 3230 aa23.43■■□□□ 1.34
INO80E-205ENST00000562441 PHF14O94880 888 aa23.42■■□□□ 1.34
INO80E-205ENST00000562441 HOXB7P09629 217 aa23.42■■□□□ 1.34
INO80E-205ENST00000562441 SSFA2P28290 1259 aa23.42■■□□□ 1.34
INO80E-205ENST00000562441 COL23A1Q86Y22 540 aaPredicted RBP23.42■■□□□ 1.34
INO80E-205ENST00000562441 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
INO80E-205ENST00000562441 CANXP27824 592 aaKnown RBP23.42■■□□□ 1.34
INO80E-205ENST00000562441 TRMT2AQ8IZ69 625 aaKnown RBP23.42■■□□□ 1.34
INO80E-205ENST00000562441 MYH16Q9H6N6 1097 aa23.42■■□□□ 1.34
INO80E-205ENST00000562441 RTCBQ9Y3I0 505 aaKnown RBP23.42■■□□□ 1.34
INO80E-205ENST00000562441 SCN7AQ01118 1682 aa23.42■■□□□ 1.34
INO80E-205ENST00000562441 BCORQ6W2J9 1755 aa23.41■■□□□ 1.34
INO80E-205ENST00000562441 E9PSI1 815 aa23.41■■□□□ 1.34
INO80E-205ENST00000562441 ELL2O00472 640 aaPredicted RBP23.41■■□□□ 1.34
INO80E-205ENST00000562441 COL15A1P39059 1388 aa23.4■■□□□ 1.34
INO80E-205ENST00000562441 EIF5P55010 431 aaKnown RBP23.4■■□□□ 1.34
INO80E-205ENST00000562441 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
INO80E-205ENST00000562441 EIF2S2P20042 333 aaKnown RBP23.39■■□□□ 1.33
INO80E-205ENST00000562441 PDIA6Q15084 440 aa23.39■■□□□ 1.33
INO80E-205ENST00000562441 ADRA2BP18089 450 aa23.38■■□□□ 1.33
INO80E-205ENST00000562441 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
INO80E-205ENST00000562441 LRP10Q7Z4F1 713 aa23.38■■□□□ 1.33
INO80E-205ENST00000562441 NECTIN2Q92692 538 aa23.38■■□□□ 1.33
INO80E-205ENST00000562441 ARHGEF1Q92888 912 aaKnown RBP23.38■■□□□ 1.33
INO80E-205ENST00000562441 IL6STP40189 918 aaPredicted RBP23.37■■□□□ 1.33
INO80E-205ENST00000562441 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
INO80E-205ENST00000562441 ERBB4Q15303 1308 aa23.37■■□□□ 1.33
INO80E-205ENST00000562441 TWISTNBQ3B726 338 aaPredicted RBP23.36■■□□□ 1.33
INO80E-205ENST00000562441 TRAPPC3LQ5T215 181 aa23.36■■□□□ 1.33
INO80E-205ENST00000562441 FLAD1Q8NFF5 587 aa23.36■■□□□ 1.33
INO80E-205ENST00000562441 ANXA1P04083 346 aa23.35■■□□□ 1.33
INO80E-205ENST00000562441 CHPF2Q9P2E5 772 aa23.34■■□□□ 1.33
INO80E-205ENST00000562441 SRP68Q9UHB9 627 aaKnown RBP23.33■■□□□ 1.33
INO80E-205ENST00000562441 ZNF330Q9Y3S2 320 aaPredicted RBP23.33■■□□□ 1.33
INO80E-205ENST00000562441 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.33
INO80E-205ENST00000562441 VAMP4O75379 141 aa23.33■■□□□ 1.32
INO80E-205ENST00000562441 ZBTB7AO95365 584 aa23.33■■□□□ 1.32
INO80E-205ENST00000562441 MYL6BP14649 208 aa23.33■■□□□ 1.32
INO80E-205ENST00000562441 CACNA1FO60840 1977 aa23.32■■□□□ 1.32
INO80E-205ENST00000562441 MSH5O43196 834 aa23.32■■□□□ 1.32
INO80E-205ENST00000562441 RFC4P35249 363 aa23.31■■□□□ 1.32
INO80E-205ENST00000562441 DDX21Q9NR30 783 aaKnown RBP eCLIP23.31■■□□□ 1.32
INO80E-205ENST00000562441 LRP5O75197 1615 aa23.31■■□□□ 1.32
INO80E-205ENST00000562441 BCL2L12Q9HB09 334 aa23.3■■□□□ 1.32
INO80E-205ENST00000562441 NARFQ9UHQ1 456 aa23.3■■□□□ 1.32
INO80E-205ENST00000562441 TBC1D2BQ9UPU7 963 aa23.3■■□□□ 1.32
INO80E-205ENST00000562441 NUP98P52948 1817 aa23.3■■□□□ 1.32
INO80E-205ENST00000562441 GYS1P13807 737 aa23.29■■□□□ 1.32
INO80E-205ENST00000562441 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
INO80E-205ENST00000562441 MTFR1LQ9H019 292 aa23.29■■□□□ 1.32
INO80E-205ENST00000562441 DBF4Q9UBU7 674 aaPredicted RBP23.29■■□□□ 1.32
INO80E-205ENST00000562441 TCERG1O14776 1098 aaKnown RBP23.28■■□□□ 1.32
INO80E-205ENST00000562441 CAMTA2O94983 1202 aa23.28■■□□□ 1.32
INO80E-205ENST00000562441 USPL1Q5W0Q7 1092 aa23.28■■□□□ 1.32
INO80E-205ENST00000562441 MSL1Q68DK7 614 aa23.28■■□□□ 1.32
INO80E-205ENST00000562441 TTLL7Q6ZT98 887 aa23.28■■□□□ 1.32
INO80E-205ENST00000562441 A0A087WZG4 1122 aa23.27■■□□□ 1.32
INO80E-205ENST00000562441 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
INO80E-205ENST00000562441 DZIP3Q86Y13 1208 aaKnown RBP23.27■■□□□ 1.32
INO80E-205ENST00000562441 SGIP1Q9BQI5 828 aa23.27■■□□□ 1.32
INO80E-205ENST00000562441 ARFGEF2Q9Y6D5 1785 aa23.27■■□□□ 1.32
INO80E-205ENST00000562441 PTGER2P43116 358 aa23.26■■□□□ 1.31
INO80E-205ENST00000562441 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
INO80E-205ENST00000562441 ATF5Q9Y2D1 282 aaPredicted RBP23.26■■□□□ 1.31
INO80E-205ENST00000562441 FKBP8Q14318 412 aa23.25■■□□□ 1.31
INO80E-205ENST00000562441 ANKRD36CQ5JPF3 1778 aa23.25■■□□□ 1.31
INO80E-205ENST00000562441 ZPR1O75312 459 aa23.25■■□□□ 1.31
INO80E-205ENST00000562441 XAGE3Q8WTP9 111 aa23.25■■□□□ 1.31
INO80E-205ENST00000562441 COPS6Q7L5N1 327 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms