RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 GPR162Q16538 588 aa14.76□□□□□ -0.05
LPCAT4-202ENST00000562404 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
LPCAT4-202ENST00000562404 NLGN1Q8N2Q7 840 aa14.76□□□□□ -0.05
LPCAT4-202ENST00000562404 BRCA1P38398 1863 aaKnown RBP14.76□□□□□ -0.05
LPCAT4-202ENST00000562404 COL15A1P39059 1388 aa14.75□□□□□ -0.05
LPCAT4-202ENST00000562404 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
LPCAT4-202ENST00000562404 THUMPD2Q9BTF0 503 aaKnown RBP14.75□□□□□ -0.05
LPCAT4-202ENST00000562404 BCL2L12Q9HB09 334 aa14.75□□□□□ -0.05
LPCAT4-202ENST00000562404 WWC3Q9ULE0 1092 aa14.75□□□□□ -0.05
LPCAT4-202ENST00000562404 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 DDR1Q08345 913 aa14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 NFE2L2Q16236 605 aa14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 PRKRIP1Q9H875 184 aaPredicted RBP14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 USP16Q9Y5T5 823 aa14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 C10orf71Q711Q0 1435 aa14.74□□□□□ -0.05
LPCAT4-202ENST00000562404 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
LPCAT4-202ENST00000562404 A1BGP04217 495 aa14.73□□□□□ -0.05
LPCAT4-202ENST00000562404 FMNL2Q96PY5 1086 aa14.73□□□□□ -0.05
LPCAT4-202ENST00000562404 PXDNLA1KZ92 1463 aa14.73□□□□□ -0.05
LPCAT4-202ENST00000562404 NRXN2Q9P2S2 1712 aa14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 SCN7AQ01118 1682 aa14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 TM4SF1P30408 202 aa14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 EIF5P55010 431 aaKnown RBP14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 LAMB4A4D0S4 1761 aa14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 BCORQ6W2J9 1755 aa14.72□□□□□ -0.05
LPCAT4-202ENST00000562404 STARD3NLO95772 234 aa14.71□□□□□ -0.05
LPCAT4-202ENST00000562404 TAF7Q15545 349 aaPredicted RBP14.71□□□□□ -0.05
LPCAT4-202ENST00000562404 POLRMTO00411 1230 aaKnown RBP14.7□□□□□ -0.06
LPCAT4-202ENST00000562404 CCDC146Q8IYE0 955 aa14.7□□□□□ -0.06
LPCAT4-202ENST00000562404 PARP3Q9Y6F1 533 aa14.7□□□□□ -0.06
LPCAT4-202ENST00000562404 A0A0G2JLW4 131 aa14.69□□□□□ -0.06
LPCAT4-202ENST00000562404 ZPR1O75312 459 aa14.69□□□□□ -0.06
LPCAT4-202ENST00000562404 NFIXQ14938 502 aa14.69□□□□□ -0.06
LPCAT4-202ENST00000562404 TEX13AQ9BXU3 409 aaPredicted RBP14.69□□□□□ -0.06
LPCAT4-202ENST00000562404 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 ANKRD31Q8N7Z5 1873 aa14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 NEFMP07197 916 aa14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 TMPOP42166 694 aaKnown RBP14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 ZNF330Q9Y3S2 320 aaPredicted RBP14.68□□□□□ -0.06
LPCAT4-202ENST00000562404 NBPF26B4DH59 902 aa14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 SNRPA1P09661 255 aaKnown RBP14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 DPEP1P16444 411 aa14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 KCNA3P22001 575 aa14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 IL6STP40189 918 aaPredicted RBP14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 RIPK4P57078 832 aa14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 NBPF10Q6P3W6 841 aaKnown RBP14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 NBPF15Q8N660 670 aa14.67□□□□□ -0.06
LPCAT4-202ENST00000562404 ARFGEF1Q9Y6D6 1849 aa14.66□□□□□ -0.06
LPCAT4-202ENST00000562404 TGFB2P61812 414 aa14.66□□□□□ -0.06
LPCAT4-202ENST00000562404 ZNF784Q8NCA9 323 aaPredicted RBP14.66□□□□□ -0.06
LPCAT4-202ENST00000562404 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
LPCAT4-202ENST00000562404 DLEC1Q9Y238 1755 aa14.65□□□□□ -0.06
LPCAT4-202ENST00000562404 CARMIL3Q8ND23 1372 aa14.65□□□□□ -0.06
LPCAT4-202ENST00000562404 GRIN3BO60391 1043 aa14.65□□□□□ -0.06
LPCAT4-202ENST00000562404 CAMTA2O94983 1202 aa14.65□□□□□ -0.06
LPCAT4-202ENST00000562404 EIF4A1P60842 406 aaKnown RBP14.65□□□□□ -0.06
LPCAT4-202ENST00000562404 TBC1D9BQ66K14 1250 aa14.65□□□□□ -0.06
LPCAT4-202ENST00000562404 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
LPCAT4-202ENST00000562404 CHRNA5P30532 468 aa14.64□□□□□ -0.07
LPCAT4-202ENST00000562404 NEUROD2Q15784 382 aa14.64□□□□□ -0.07
LPCAT4-202ENST00000562404 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
LPCAT4-202ENST00000562404 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
LPCAT4-202ENST00000562404 A0A087WZG4 1122 aa14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 SERPINB2P05120 415 aa14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 WDR43Q15061 677 aaKnown RBP eCLIP14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 RUNDC1Q96C34 613 aa14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 NUP98P52948 1817 aa14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 COL11A2P13942 1736 aaPredicted RBP14.63□□□□□ -0.07
LPCAT4-202ENST00000562404 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
LPCAT4-202ENST00000562404 CCDC24Q8N4L8 307 aa14.62□□□□□ -0.07
LPCAT4-202ENST00000562404 PNISRQ8TF01 805 aaKnown RBP14.62□□□□□ -0.07
LPCAT4-202ENST00000562404 BCS1LQ9Y276 419 aa14.62□□□□□ -0.07
LPCAT4-202ENST00000562404 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
LPCAT4-202ENST00000562404 TSPYL4Q9UJ04 414 aa14.6□□□□□ -0.07
LPCAT4-202ENST00000562404 SBF1O95248 1867 aa14.6□□□□□ -0.07
LPCAT4-202ENST00000562404 HLFQ16534 295 aa14.59□□□□□ -0.07
LPCAT4-202ENST00000562404 KRT24Q2M2I5 525 aa14.59□□□□□ -0.07
LPCAT4-202ENST00000562404 PRR5LQ6MZQ0 368 aa14.59□□□□□ -0.07
LPCAT4-202ENST00000562404 ADCY9O60503 1353 aa14.59□□□□□ -0.07
LPCAT4-202ENST00000562404 NGEFQ8N5V2 710 aa14.58□□□□□ -0.08
LPCAT4-202ENST00000562404 PIM2Q9P1W9 311 aa14.58□□□□□ -0.08
LPCAT4-202ENST00000562404 CCDC88AQ3V6T2 1871 aa14.58□□□□□ -0.08
LPCAT4-202ENST00000562404 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
LPCAT4-202ENST00000562404 APAF1O14727 1248 aa14.57□□□□□ -0.08
LPCAT4-202ENST00000562404 LMOD3Q0VAK6 560 aa14.57□□□□□ -0.08
LPCAT4-202ENST00000562404 TTLL7Q6ZT98 887 aa14.57□□□□□ -0.08
LPCAT4-202ENST00000562404 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
LPCAT4-202ENST00000562404 CHL1O00533 1208 aa14.56□□□□□ -0.08
LPCAT4-202ENST00000562404 ANXA1P04083 346 aa14.56□□□□□ -0.08
LPCAT4-202ENST00000562404 MYL6BP14649 208 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms