RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 SND1Q7KZF4 910 aaKnown RBP eCLIP8.07□□□□□ -1.12
CNOT1-203ENST00000562046 RNF217Q8TC41 542 aa8.07□□□□□ -1.12
CNOT1-203ENST00000562046 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
CNOT1-203ENST00000562046 EGFL7Q9UHF1 273 aa8.07□□□□□ -1.12
CNOT1-203ENST00000562046 ECM1Q16610 540 aa8.06□□□□□ -1.12
CNOT1-203ENST00000562046 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-203ENST00000562046 L3MBTL2Q969R5 705 aa8.06□□□□□ -1.12
CNOT1-203ENST00000562046 NIFKQ9BYG3 293 aaKnown RBP8.06□□□□□ -1.12
CNOT1-203ENST00000562046 SAP130Q9H0E3 1048 aa8.06□□□□□ -1.12
CNOT1-203ENST00000562046 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-203ENST00000562046 CABP1Q9NZU7 370 aa8.06□□□□□ -1.12
CNOT1-203ENST00000562046 MTMR7Q9Y216 660 aa8.06□□□□□ -1.12
CNOT1-203ENST00000562046 DNMT3AQ9Y6K1 912 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-203ENST00000562046 SERTM1A2A2V5 107 aa8.05□□□□□ -1.12
CNOT1-203ENST00000562046 AXIN1O15169 862 aa8.05□□□□□ -1.12
CNOT1-203ENST00000562046 NAA30Q147X3 362 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-203ENST00000562046 LAPTM4AQ15012 233 aa8.05□□□□□ -1.12
CNOT1-203ENST00000562046 C4orf17Q53FE4 359 aa8.05□□□□□ -1.12
CNOT1-203ENST00000562046 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
CNOT1-203ENST00000562046 TMEM214Q6NUQ4 689 aaKnown RBP8.05□□□□□ -1.12
CNOT1-203ENST00000562046 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
CNOT1-203ENST00000562046 SOS2Q07890 1332 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-203ENST00000562046 ICMTO60725 284 aa8.04□□□□□ -1.12
CNOT1-203ENST00000562046 C7orf43Q8WVR3 580 aa8.04□□□□□ -1.12
CNOT1-203ENST00000562046 MYO19Q96H55 970 aa8.04□□□□□ -1.12
CNOT1-203ENST00000562046 ZFP42Q96MM3 310 aa8.04□□□□□ -1.12
CNOT1-203ENST00000562046 AAASQ9NRG9 546 aa8.04□□□□□ -1.12
CNOT1-203ENST00000562046 PARP3Q9Y6F1 533 aa8.04□□□□□ -1.12
CNOT1-203ENST00000562046 TTLL8A6PVC2 850 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 ZNF211Q13398 564 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-203ENST00000562046 SCARF1Q14162 830 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 COX20Q5RI15 118 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 TMCO4Q5TGY1 634 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 HELQQ8TDG4 1101 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 VTI1AQ96AJ9 217 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
CNOT1-203ENST00000562046 ST8SIA5O15466 376 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 ABL1P00519 1130 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 NPR3P17342 541 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 TXLNAP40222 546 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 POU4F2Q12837 409 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 MTMR3Q13615 1198 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 WDR44Q5JSH3 913 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 GNASQ5JWF2 1037 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 C16orf46Q6P387 395 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 NBPF10Q6P3W6 841 aaKnown RBP8.02□□□□□ -1.13
CNOT1-203ENST00000562046 LYSMD3Q7Z3D4 306 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 ANO2Q9NQ90 1003 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNOT1-203ENST00000562046 DACH1Q9UI36 760 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 ZNF232Q9UNY5 417 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 CHMP3Q9Y3E7 222 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 HCN4Q9Y3Q4 1203 aa8.02□□□□□ -1.13
CNOT1-203ENST00000562046 TNFRSF10BO14763 440 aa8.01□□□□□ -1.13
CNOT1-203ENST00000562046 GTF2E1P29083 439 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-203ENST00000562046 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
CNOT1-203ENST00000562046 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT1-203ENST00000562046 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
CNOT1-203ENST00000562046 C1orf53Q5VUE5 145 aa8.01□□□□□ -1.13
CNOT1-203ENST00000562046 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
CNOT1-203ENST00000562046 ALDH16A1Q8IZ83 802 aa8.01□□□□□ -1.13
CNOT1-203ENST00000562046 ATP13A2Q9NQ11 1180 aa8.01□□□□□ -1.13
CNOT1-203ENST00000562046 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
CNOT1-203ENST00000562046 PHACTR1Q9C0D0 580 aa8□□□□□ -1.13
CNOT1-203ENST00000562046 DNMT3LQ9UJW3 386 aa8□□□□□ -1.13
CNOT1-203ENST00000562046 CCDC9Q9Y3X0 531 aaKnown RBP8□□□□□ -1.13
CNOT1-203ENST00000562046 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 H3BRB1 525 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 PHKA2P46019 1235 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 RTN1Q16799 776 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 FAM26DQ5JW98 314 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 TUT1Q9H6E5 874 aaKnown RBP7.99□□□□□ -1.13
CNOT1-203ENST00000562046 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
CNOT1-203ENST00000562046 RHOQP17081 205 aa7.98□□□□□ -1.13
CNOT1-203ENST00000562046 ATP4AP20648 1035 aa7.98□□□□□ -1.13
CNOT1-203ENST00000562046 CCDC27Q2M243 656 aa7.98□□□□□ -1.13
CNOT1-203ENST00000562046 KLRG1Q96E93 195 aa7.98□□□□□ -1.13
CNOT1-203ENST00000562046 NGLY1Q96IV0 654 aa7.98□□□□□ -1.13
CNOT1-203ENST00000562046 IRX2Q9BZI1 471 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-203ENST00000562046 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
CNOT1-203ENST00000562046 RGS22Q8NE09 1264 aa7.97□□□□□ -1.13
CNOT1-203ENST00000562046 STIM2Q9P246 746 aa7.97□□□□□ -1.13
CNOT1-203ENST00000562046 MPSTP25325 297 aa7.96□□□□□ -1.14
CNOT1-203ENST00000562046 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
CNOT1-203ENST00000562046 C11orf91Q3C1V1 193 aa7.96□□□□□ -1.14
CNOT1-203ENST00000562046 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
CNOT1-203ENST00000562046 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
CNOT1-203ENST00000562046 KLK14Q9P0G3 267 aa7.96□□□□□ -1.14
CNOT1-203ENST00000562046 BCS1LQ9Y276 419 aa7.96□□□□□ -1.14
CNOT1-203ENST00000562046 SENP3-EIF4A1A0A087X0R7 540 aa7.95□□□□□ -1.14
CNOT1-203ENST00000562046 LCE2BO14633 110 aa7.95□□□□□ -1.14
CNOT1-203ENST00000562046 ZBTB39O15060 712 aa7.95□□□□□ -1.14
CNOT1-203ENST00000562046 FAM13AO94988 1023 aa7.95□□□□□ -1.14
CNOT1-203ENST00000562046 DGKZQ13574 1117 aa7.95□□□□□ -1.14
CNOT1-203ENST00000562046 DNAJC14Q6Y2X3 702 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-203ENST00000562046 TIMMDC1Q9NPL8 285 aa7.95□□□□□ -1.14
CNOT1-203ENST00000562046 GPC6Q9Y625 555 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-203ENST00000562046 A0A1B0GTH6 734 aa7.94□□□□□ -1.14
CNOT1-203ENST00000562046 BRD2P25440 801 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms