RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 ZNF790Q6PG37 636 aa16.69■□□□□ 0.26
SHF-211ENST00000561278 BCS1LQ9Y276 419 aa16.69■□□□□ 0.26
SHF-211ENST00000561278 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
SHF-211ENST00000561278 STARD3NLO95772 234 aa16.68■□□□□ 0.26
SHF-211ENST00000561278 DDR1Q08345 913 aa16.68■□□□□ 0.26
SHF-211ENST00000561278 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
SHF-211ENST00000561278 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
SHF-211ENST00000561278 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
SHF-211ENST00000561278 SIPA1L3O60292 1781 aaPredicted RBP16.68■□□□□ 0.26
SHF-211ENST00000561278 ATP10DQ9P241 1426 aa16.68■□□□□ 0.26
SHF-211ENST00000561278 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
SHF-211ENST00000561278 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
SHF-211ENST00000561278 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
SHF-211ENST00000561278 DPEP1P16444 411 aa16.67■□□□□ 0.26
SHF-211ENST00000561278 FCHSD2O94868 740 aa16.66■□□□□ 0.26
SHF-211ENST00000561278 NEFMP07197 916 aa16.66■□□□□ 0.26
SHF-211ENST00000561278 MCM10Q7L590 875 aa16.66■□□□□ 0.26
SHF-211ENST00000561278 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
SHF-211ENST00000561278 FMNL2Q96PY5 1086 aa16.66■□□□□ 0.26
SHF-211ENST00000561278 POLRMTO00411 1230 aaKnown RBP16.65■□□□□ 0.26
SHF-211ENST00000561278 NARFQ9UHQ1 456 aa16.65■□□□□ 0.26
SHF-211ENST00000561278 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
SHF-211ENST00000561278 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
SHF-211ENST00000561278 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
SHF-211ENST00000561278 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
SHF-211ENST00000561278 GPBP1L1Q9HC44 474 aaPredicted RBP16.63■□□□□ 0.25
SHF-211ENST00000561278 ADCY9O60503 1353 aa16.63■□□□□ 0.25
SHF-211ENST00000561278 A0A087WZG4 1122 aa16.62■□□□□ 0.25
SHF-211ENST00000561278 KCNQ3O43525 872 aa16.62■□□□□ 0.25
SHF-211ENST00000561278 TM4SF1P30408 202 aa16.62■□□□□ 0.25
SHF-211ENST00000561278 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
SHF-211ENST00000561278 NFIXQ14938 502 aa16.62■□□□□ 0.25
SHF-211ENST00000561278 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
SHF-211ENST00000561278 SENP3-EIF4A1A0A087X0R7 540 aa16.61■□□□□ 0.25
SHF-211ENST00000561278 CHRNA5P30532 468 aa16.61■□□□□ 0.25
SHF-211ENST00000561278 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
SHF-211ENST00000561278 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
SHF-211ENST00000561278 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
SHF-211ENST00000561278 DALRD3Q5D0E6 543 aaKnown RBP16.6■□□□□ 0.25
SHF-211ENST00000561278 BCL2L12Q9HB09 334 aa16.6■□□□□ 0.25
SHF-211ENST00000561278 BRCA1P38398 1863 aaKnown RBP16.6■□□□□ 0.25
SHF-211ENST00000561278 A1BGP04217 495 aa16.59■□□□□ 0.25
SHF-211ENST00000561278 SERPINB2P05120 415 aa16.59■□□□□ 0.25
SHF-211ENST00000561278 KCNA3P22001 575 aa16.59■□□□□ 0.25
SHF-211ENST00000561278 TBC1D2BQ9UPU7 963 aa16.59■□□□□ 0.25
SHF-211ENST00000561278 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
SHF-211ENST00000561278 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
SHF-211ENST00000561278 IL6STP40189 918 aaPredicted RBP16.58■□□□□ 0.24
SHF-211ENST00000561278 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
SHF-211ENST00000561278 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
SHF-211ENST00000561278 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
SHF-211ENST00000561278 NPHP1O15259 732 aa16.57■□□□□ 0.24
SHF-211ENST00000561278 TBC1D9BQ66K14 1250 aa16.57■□□□□ 0.24
SHF-211ENST00000561278 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
SHF-211ENST00000561278 CARMIL3Q8ND23 1372 aa16.56■□□□□ 0.24
SHF-211ENST00000561278 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
SHF-211ENST00000561278 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
SHF-211ENST00000561278 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
SHF-211ENST00000561278 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
SHF-211ENST00000561278 ARFGEF1Q9Y6D6 1849 aa16.56■□□□□ 0.24
SHF-211ENST00000561278 RALBP1Q15311 655 aa16.55■□□□□ 0.24
SHF-211ENST00000561278 TAF7Q15545 349 aaPredicted RBP16.55■□□□□ 0.24
SHF-211ENST00000561278 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
SHF-211ENST00000561278 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
SHF-211ENST00000561278 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
SHF-211ENST00000561278 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
SHF-211ENST00000561278 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
SHF-211ENST00000561278 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
SHF-211ENST00000561278 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
SHF-211ENST00000561278 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
SHF-211ENST00000561278 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
SHF-211ENST00000561278 C2CD5Q86YS7 1000 aa16.53■□□□□ 0.24
SHF-211ENST00000561278 H0YIN7 160 aa16.52■□□□□ 0.24
SHF-211ENST00000561278 CCDC24Q8N4L8 307 aa16.52■□□□□ 0.24
SHF-211ENST00000561278 PNISRQ8TF01 805 aaKnown RBP16.52■□□□□ 0.24
SHF-211ENST00000561278 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
SHF-211ENST00000561278 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
SHF-211ENST00000561278 RNF181Q9P0P0 153 aa16.52■□□□□ 0.24
SHF-211ENST00000561278 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
SHF-211ENST00000561278 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
SHF-211ENST00000561278 CNBD1Q8NA66 436 aa16.51■□□□□ 0.23
SHF-211ENST00000561278 MYBBP1AQ9BQG0 1328 aaKnown RBP16.5■□□□□ 0.23
SHF-211ENST00000561278 ST5P78524 1137 aa16.5■□□□□ 0.23
SHF-211ENST00000561278 PRR5LQ6MZQ0 368 aa16.5■□□□□ 0.23
SHF-211ENST00000561278 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
SHF-211ENST00000561278 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
SHF-211ENST00000561278 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
SHF-211ENST00000561278 PDE6BP35913 854 aa16.49■□□□□ 0.23
SHF-211ENST00000561278 RASSF7Q02833 373 aa16.49■□□□□ 0.23
SHF-211ENST00000561278 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHF-211ENST00000561278 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
SHF-211ENST00000561278 BRIP1Q9BX63 1249 aa16.48■□□□□ 0.23
SHF-211ENST00000561278 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
SHF-211ENST00000561278 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
SHF-211ENST00000561278 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
SHF-211ENST00000561278 KIF3CO14782 793 aa16.47■□□□□ 0.23
SHF-211ENST00000561278 RIPK4P57078 832 aa16.47■□□□□ 0.23
SHF-211ENST00000561278 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
SHF-211ENST00000561278 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
SHF-211ENST00000561278 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms