RNA–Protein interactions for RNA: ENST00000560906.1

AC013553.1-201, humanhuman

BASIC

Gene AC013553.1, Length 267 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013553.1-201ENST00000560906 CHD4Q14839 1912 aa18.05■□□□□ 0.48
AC013553.1-201ENST00000560906 COL15A1P39059 1388 aa18.04■□□□□ 0.48
AC013553.1-201ENST00000560906 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
AC013553.1-201ENST00000560906 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
AC013553.1-201ENST00000560906 STARD3NLO95772 234 aa18.04■□□□□ 0.48
AC013553.1-201ENST00000560906 CD2APQ9Y5K6 639 aa18.04■□□□□ 0.48
AC013553.1-201ENST00000560906 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
AC013553.1-201ENST00000560906 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.48
AC013553.1-201ENST00000560906 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
AC013553.1-201ENST00000560906 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
AC013553.1-201ENST00000560906 LAMB4A4D0S4 1761 aa18.01■□□□□ 0.47
AC013553.1-201ENST00000560906 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
AC013553.1-201ENST00000560906 ZPR1O75312 459 aa18■□□□□ 0.47
AC013553.1-201ENST00000560906 FKBP8Q14318 412 aa18■□□□□ 0.47
AC013553.1-201ENST00000560906 GPR162Q16538 588 aa18■□□□□ 0.47
AC013553.1-201ENST00000560906 USPL1Q5W0Q7 1092 aa18■□□□□ 0.47
AC013553.1-201ENST00000560906 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
AC013553.1-201ENST00000560906 THUMPD2Q9BTF0 503 aaKnown RBP18■□□□□ 0.47
AC013553.1-201ENST00000560906 SCN7AQ01118 1682 aa17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 PARP3Q9Y6F1 533 aa17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
AC013553.1-201ENST00000560906 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
AC013553.1-201ENST00000560906 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
AC013553.1-201ENST00000560906 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
AC013553.1-201ENST00000560906 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
AC013553.1-201ENST00000560906 RIPK4P57078 832 aa17.98■□□□□ 0.47
AC013553.1-201ENST00000560906 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
AC013553.1-201ENST00000560906 A1BGP04217 495 aa17.97■□□□□ 0.47
AC013553.1-201ENST00000560906 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
AC013553.1-201ENST00000560906 YY1P25490 414 aa17.97■□□□□ 0.47
AC013553.1-201ENST00000560906 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
AC013553.1-201ENST00000560906 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
AC013553.1-201ENST00000560906 BCORQ6W2J9 1755 aa17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 IL6STP40189 918 aaPredicted RBP17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 DDR1Q08345 913 aa17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
AC013553.1-201ENST00000560906 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
AC013553.1-201ENST00000560906 BRCA1P38398 1863 aaKnown RBP17.95■□□□□ 0.46
AC013553.1-201ENST00000560906 A0A087WZG4 1122 aa17.95■□□□□ 0.46
AC013553.1-201ENST00000560906 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
AC013553.1-201ENST00000560906 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
AC013553.1-201ENST00000560906 TM4SF1P30408 202 aa17.94■□□□□ 0.46
AC013553.1-201ENST00000560906 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
AC013553.1-201ENST00000560906 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
AC013553.1-201ENST00000560906 NFIXQ14938 502 aa17.93■□□□□ 0.46
AC013553.1-201ENST00000560906 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
AC013553.1-201ENST00000560906 WWC3Q9ULE0 1092 aa17.93■□□□□ 0.46
AC013553.1-201ENST00000560906 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
AC013553.1-201ENST00000560906 TGFB2P61812 414 aa17.92■□□□□ 0.46
AC013553.1-201ENST00000560906 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
AC013553.1-201ENST00000560906 TBC1D2BQ9UPU7 963 aa17.92■□□□□ 0.46
AC013553.1-201ENST00000560906 GRIN3BO60391 1043 aa17.91■□□□□ 0.46
AC013553.1-201ENST00000560906 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
AC013553.1-201ENST00000560906 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 CCDC184Q52MB2 194 aa17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
AC013553.1-201ENST00000560906 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
AC013553.1-201ENST00000560906 DZIP3Q86Y13 1208 aaKnown RBP17.89■□□□□ 0.45
AC013553.1-201ENST00000560906 ANP32CO43423 234 aa17.88■□□□□ 0.45
AC013553.1-201ENST00000560906 DPEP1P16444 411 aa17.88■□□□□ 0.45
AC013553.1-201ENST00000560906 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
AC013553.1-201ENST00000560906 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
AC013553.1-201ENST00000560906 BABAM1Q9NWV8 329 aa17.88■□□□□ 0.45
AC013553.1-201ENST00000560906 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
AC013553.1-201ENST00000560906 SERPINB2P05120 415 aa17.87■□□□□ 0.45
AC013553.1-201ENST00000560906 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
AC013553.1-201ENST00000560906 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
AC013553.1-201ENST00000560906 APAF1O14727 1248 aa17.85■□□□□ 0.45
AC013553.1-201ENST00000560906 KCNA3P22001 575 aa17.85■□□□□ 0.45
AC013553.1-201ENST00000560906 CARMIL3Q8ND23 1372 aa17.85■□□□□ 0.45
AC013553.1-201ENST00000560906 NUP98P52948 1817 aa17.84■□□□□ 0.45
AC013553.1-201ENST00000560906 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
AC013553.1-201ENST00000560906 CHL1O00533 1208 aa17.83■□□□□ 0.44
AC013553.1-201ENST00000560906 CHRNA5P30532 468 aa17.83■□□□□ 0.44
AC013553.1-201ENST00000560906 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.44
AC013553.1-201ENST00000560906 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
AC013553.1-201ENST00000560906 MYL6BP14649 208 aa17.82■□□□□ 0.44
AC013553.1-201ENST00000560906 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
AC013553.1-201ENST00000560906 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
AC013553.1-201ENST00000560906 MRS2Q9HD23 443 aa17.82■□□□□ 0.44
AC013553.1-201ENST00000560906 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
AC013553.1-201ENST00000560906 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
AC013553.1-201ENST00000560906 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
AC013553.1-201ENST00000560906 PRR5LQ6MZQ0 368 aa17.81■□□□□ 0.44
AC013553.1-201ENST00000560906 ZNF784Q8NCA9 323 aaPredicted RBP17.81■□□□□ 0.44
AC013553.1-201ENST00000560906 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
AC013553.1-201ENST00000560906 RGL2O15211 777 aa17.8■□□□□ 0.44
AC013553.1-201ENST00000560906 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms