RNA–Protein interactions for RNA: ENST00000560676.5

AKAP13-222, Transcript of A-kinase anchoring protein 13, human

APPRIS ALT2 TSL 1 (best)

Gene AKAP13, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AKAP13-222	ENST00000560676	SSH3	Q8TE77	659 aa		10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	PEAK1	Q9H792	1746 aa		10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	IGSF1	Q8N6C5	1336 aa		10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	BABAM1	Q9NWV8	329 aa		10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	PXDNL	A1KZ92	1463 aa		10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	RAD50	Q92878	1312 aa		10.28	□□□□□ -0.76
AKAP13-222	ENST00000560676	ZSCAN22	P10073	491 aa	Predicted RBP	10.27	□□□□□ -0.76
AKAP13-222	ENST00000560676	UBE2H	P62256	183 aa		10.27	□□□□□ -0.76
AKAP13-222	ENST00000560676	USP44	Q9H0E7	712 aa		10.27	□□□□□ -0.76
AKAP13-222	ENST00000560676	GNAT3	A8MTJ3	354 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	SGSM2	O43147	1006 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	AMPH	P49418	695 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	EYA1	Q99502	592 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	NALCN	Q8IZF0	1738 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	CNTROB	Q8N137	903 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	PIBF1	Q8WXW3	757 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	IL1RAPL2	Q9NP60	686 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	LIMCH1	Q9UPQ0	1083 aa		10.27	□□□□□ -0.77
AKAP13-222	ENST00000560676	PRIMPOL	Q96LW4	560 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	NUTM2F	A1L443	756 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	STX6	O43752	255 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	SURF6	O75683	361 aa	Known RBP	10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	HMGN5	P82970	282 aa	Known RBP	10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	NUTM1	Q86Y26	1132 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	NECTIN2	Q92692	538 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	TTC14	Q96N46	770 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	SNX14	Q9Y5W7	946 aa		10.26	□□□□□ -0.77
AKAP13-222	ENST00000560676	MYRIP	Q8NFW9	859 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	RHPN1	Q8TCX5	695 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	KIF1BP	Q96EK5	621 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	IL25	Q9H293	177 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	USP25	Q9UHP3	1055 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	SMC3	Q9UQE7	1217 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	CNPY2	Q9Y2B0	182 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	TUBGCP6	Q96RT7	1819 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	TMEM2	Q9UHN6	1383 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	ADCY5	O95622	1261 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	POLA2	Q14181	598 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	TAF7	Q15545	349 aa	Predicted RBP	10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	PI4K2B	Q8TCG2	481 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	TOPAZ1	Q8N9V7	1692 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	SYT1	P21579	422 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	AK2	P54819	239 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	HSP90AB4P	Q58FF6	505 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	PPP1R42	Q7Z4L9	355 aa		10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	LSG1	Q9H089	658 aa	Known RBP	10.25	□□□□□ -0.77
AKAP13-222	ENST00000560676	F13A1	P00488	732 aa		10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	HDGFL1	Q5TGJ6	251 aa		10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	XRN1	Q8IZH2	1706 aa	Known RBP	10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	KDM4A	O75164	1064 aa		10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	MAP4K4	O95819	1239 aa	Predicted RBP	10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	HCLS1	P14317	486 aa	Predicted RBP	10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	RUFY3	Q7L099	469 aa		10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	CHMP4A	Q9BY43	222 aa		10.24	□□□□□ -0.77
AKAP13-222	ENST00000560676	TNR	Q92752	1358 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	MAP3K5	Q99683	1374 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	ADAMTS13	Q76LX8	1427 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	SRGAP3	O43295	1099 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	RUFY2	Q8WXA3	655 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	PTPRU	Q92729	1446 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	TPM3	P06753	285 aa		10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	FAM208A	Q9UK61	1670 aa	Known RBP	10.23	□□□□□ -0.77
AKAP13-222	ENST00000560676	TSPOAP1	O95153	1857 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	LRRC37A3	O60309	1634 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	TTC41P	Q6P2S7	1318 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	GLRX3	O76003	335 aa	Known RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	RASEF	Q8IZ41	740 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	NGDN	Q8NEJ9	315 aa	Known RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	IL17RE	Q8NFR9	667 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	USP42	Q9H9J4	1324 aa	Known RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	FIBP	O43427	364 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	PDIA4	P13667	645 aa	Known RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	PIP4K2B	P78356	416 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	SPTLC3	Q9NUV7	552 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	CAST	P20810	708 aa	Known RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	VPS53	Q5VIR6	699 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	CWC27	Q6UX04	472 aa	Known RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	ZNF830	Q96NB3	372 aa	Predicted RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	TTC12	Q9H892	705 aa	Predicted RBP	10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	DIAPH3	Q9NSV4	1193 aa		10.22	□□□□□ -0.77
AKAP13-222	ENST00000560676	PLEKHG1	Q9ULL1	1385 aa		10.21	□□□□□ -0.77
AKAP13-222	ENST00000560676	TM6SF1	Q9BZW5	370 aa		10.21	□□□□□ -0.77
AKAP13-222	ENST00000560676	PHAX	Q9H814	394 aa	Known RBP	10.21	□□□□□ -0.77
AKAP13-222	ENST00000560676	HYPK	Q9NX55	129 aa		10.21	□□□□□ -0.77
AKAP13-222	ENST00000560676	GJB2	P29033	226 aa		10.21	□□□□□ -0.78
AKAP13-222	ENST00000560676	FUCA2	Q9BTY2	467 aa		10.21	□□□□□ -0.78
AKAP13-222	ENST00000560676	PDRG1	Q9NUG6	133 aa		10.21	□□□□□ -0.78
AKAP13-222	ENST00000560676	RIMS1	Q86UR5	1692 aa	Known RBP	10.21	□□□□□ -0.78
AKAP13-222	ENST00000560676	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.2	□□□□□ -0.78
AKAP13-222	ENST00000560676	CCDC94	Q9BW85	323 aa	Predicted RBP	10.2	□□□□□ -0.78
AKAP13-222	ENST00000560676	SPG7	Q9UQ90	795 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms