RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SCAPERQ9BY12 1400 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 CENPJQ9HC77 1338 aaPredicted RBP7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 FUT2Q10981 343 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 BECN1Q14457 450 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 SYMPKQ92797 1274 aaKnown RBP7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 TFIP11Q9UBB9 837 aaKnown RBP7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 USTQ9Y2C2 406 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 PBRM1Q86U86 1689 aa7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 BRD1O95696 1058 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 FOXK2Q01167 660 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 NR6A1Q15406 480 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 RGS22Q8NE09 1264 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 CRBNQ96SW2 442 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 SLC27A5Q9Y2P5 690 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 PRDM15P57071 1507 aaPredicted RBP7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 ABCC2Q92887 1545 aa7.62□□□□□ -1.19
SNRPA1-209ENST00000560307 GPRASP1Q5JY77 1395 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 ANKRD30AQ9BXX3 1397 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 RAPGEF6Q8TEU7 1601 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 SOBPA7XYQ1 873 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 GPR37L1O60883 481 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 FRAT2O75474 233 aaPredicted RBP7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 KCNA1Q09470 495 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 PNMA1Q8ND90 353 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 ALG2Q9H553 416 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 CDK13Q14004 1512 aaKnown RBP7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 PTPRGP23470 1445 aa7.61□□□□□ -1.19
SNRPA1-209ENST00000560307 RNF17Q9BXT8 1623 aaKnown RBP7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 MAPK8IP3Q9UPT6 1336 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 ADAMTS12P58397 1594 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 HSP90AA1P07900 732 aaKnown RBP7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 AAMPQ13685 434 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 MSS51Q4VC12 460 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 DCAF11Q8TEB1 546 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 KIAA0586Q9BVV6 1533 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 NLRP1Q9C000 1473 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 NUP160Q12769 1436 aa7.6□□□□□ -1.19
SNRPA1-209ENST00000560307 FSD2A1L4K1 749 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 ADAM23O75077 832 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 TPM2P07951 284 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 SOX11P35716 441 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 ATP6V1AP38606 617 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 KRTAP1-3Q8IUG1 177 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 UCN2Q96RP3 112 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 PNNQ9H307 717 aaKnown RBP7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 RRAGDQ9NQL2 400 aaPredicted RBP7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 CHIC2Q9UKJ5 165 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 ABCC10Q5T3U5 1492 aa7.59□□□□□ -1.19
SNRPA1-209ENST00000560307 PER1O15534 1290 aaPredicted RBP7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 SKOR1P84550 965 aa7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 HSP90AA2PQ14568 343 aaPredicted RBP7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 CCDC24Q8N4L8 307 aa7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 NGEFQ8N5V2 710 aa7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 IVNS1ABPQ9Y6Y0 642 aa7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 KIAA0556O60303 1618 aa7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 CDC42BPAQ5VT25 1732 aa7.58□□□□□ -1.2
SNRPA1-209ENST00000560307 TARBP1Q13395 1621 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 SRPK2P78362 688 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 SCARF1Q14162 830 aa7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 VRTNQ9H8Y1 702 aa7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 SYNMO15061 1565 aa7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 ARHGEF5Q12774 1597 aa7.57□□□□□ -1.2
SNRPA1-209ENST00000560307 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 ZNF521Q96K83 1311 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 PIK3C2GO75747 1445 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 TROQ12816 1431 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 PRAG1Q86YV5 1406 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 GOLGA6L3A6NEY3 463 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 PTMSP20962 102 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 MRE11P49959 708 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 WNT7BP56706 349 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 RNF19BQ6ZMZ0 732 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 TBC1D9Q6ZT07 1266 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 SVOPQ8N4V2 548 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 ZNF428Q96B54 188 aa7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 URB2Q14146 1524 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-209ENST00000560307 MYO5CQ9NQX4 1742 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 USP19O94966 1318 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 TERF1P54274 439 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 CNTNAP3BQ96NU0 1288 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 CNTNAP3Q9BZ76 1288 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 ANTXR1Q9H6X2 564 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 NPC1L1Q9UHC9 1359 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 NKTRP30414 1462 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 CCDC141Q6ZP82 1450 aa7.55□□□□□ -1.2
SNRPA1-209ENST00000560307 UNC13BO14795 1591 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 CGNL1Q0VF96 1302 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 ANKRD50Q9ULJ7 1429 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 CCDC27Q2M243 656 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 DUSP27Q5VZP5 1158 aa7.54□□□□□ -1.2
SNRPA1-209ENST00000560307 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms