RNA–Protein interactions for RNA: ENST00000559741.5

PSME1-206, Transcript of proteasome activator subunit 1, humanhuman

TSL 3

Gene PSME1, Length 763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-206ENST00000559741 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
PSME1-206ENST00000559741 KCNQ3O43525 872 aa13.2□□□□□ -0.3
PSME1-206ENST00000559741 NLGN1Q8N2Q7 840 aa13.2□□□□□ -0.3
PSME1-206ENST00000559741 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
PSME1-206ENST00000559741 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
PSME1-206ENST00000559741 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
PSME1-206ENST00000559741 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
PSME1-206ENST00000559741 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
PSME1-206ENST00000559741 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
PSME1-206ENST00000559741 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
PSME1-206ENST00000559741 GYS1P13807 737 aa13.18□□□□□ -0.3
PSME1-206ENST00000559741 COL15A1P39059 1388 aa13.18□□□□□ -0.3
PSME1-206ENST00000559741 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
PSME1-206ENST00000559741 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
PSME1-206ENST00000559741 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
PSME1-206ENST00000559741 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
PSME1-206ENST00000559741 THUMPD2Q9BTF0 503 aaKnown RBP13.16□□□□□ -0.3
PSME1-206ENST00000559741 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
PSME1-206ENST00000559741 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
PSME1-206ENST00000559741 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
PSME1-206ENST00000559741 CD2APQ9Y5K6 639 aa13.16□□□□□ -0.3
PSME1-206ENST00000559741 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
PSME1-206ENST00000559741 A0A087WZG4 1122 aa13.15□□□□□ -0.3
PSME1-206ENST00000559741 ZPR1O75312 459 aa13.15□□□□□ -0.3
PSME1-206ENST00000559741 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
PSME1-206ENST00000559741 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
PSME1-206ENST00000559741 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
PSME1-206ENST00000559741 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
PSME1-206ENST00000559741 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
PSME1-206ENST00000559741 A1BGP04217 495 aa13.14□□□□□ -0.31
PSME1-206ENST00000559741 MMP10P09238 476 aa13.14□□□□□ -0.31
PSME1-206ENST00000559741 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
PSME1-206ENST00000559741 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
PSME1-206ENST00000559741 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
PSME1-206ENST00000559741 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
PSME1-206ENST00000559741 GOLGB1Q14789 3259 aaKnown RBP13.13□□□□□ -0.31
PSME1-206ENST00000559741 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
PSME1-206ENST00000559741 APAF1O14727 1248 aa13.13□□□□□ -0.31
PSME1-206ENST00000559741 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
PSME1-206ENST00000559741 FKBP8Q14318 412 aa13.13□□□□□ -0.31
PSME1-206ENST00000559741 UTRNP46939 3433 aa13.13□□□□□ -0.31
PSME1-206ENST00000559741 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
PSME1-206ENST00000559741 CHL1O00533 1208 aa13.12□□□□□ -0.31
PSME1-206ENST00000559741 TM4SF1P30408 202 aa13.12□□□□□ -0.31
PSME1-206ENST00000559741 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
PSME1-206ENST00000559741 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
PSME1-206ENST00000559741 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
PSME1-206ENST00000559741 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
PSME1-206ENST00000559741 GPR162Q16538 588 aa13.11□□□□□ -0.31
PSME1-206ENST00000559741 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
PSME1-206ENST00000559741 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
PSME1-206ENST00000559741 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
PSME1-206ENST00000559741 RGL2O15211 777 aa13.1□□□□□ -0.31
PSME1-206ENST00000559741 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
PSME1-206ENST00000559741 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
PSME1-206ENST00000559741 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
PSME1-206ENST00000559741 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
PSME1-206ENST00000559741 POLRMTO00411 1230 aaKnown RBP13.09□□□□□ -0.31
PSME1-206ENST00000559741 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
PSME1-206ENST00000559741 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
PSME1-206ENST00000559741 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
PSME1-206ENST00000559741 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
PSME1-206ENST00000559741 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
PSME1-206ENST00000559741 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 TGFB2P61812 414 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 DDR1Q08345 913 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 NFIXQ14938 502 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
PSME1-206ENST00000559741 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
PSME1-206ENST00000559741 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
PSME1-206ENST00000559741 HOXB7P09629 217 aa13.07□□□□□ -0.32
PSME1-206ENST00000559741 GNAI1P63096 354 aa13.07□□□□□ -0.32
PSME1-206ENST00000559741 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
PSME1-206ENST00000559741 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
PSME1-206ENST00000559741 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
PSME1-206ENST00000559741 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
PSME1-206ENST00000559741 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
PSME1-206ENST00000559741 PXDNLA1KZ92 1463 aa13.05□□□□□ -0.32
PSME1-206ENST00000559741 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
PSME1-206ENST00000559741 SERPINB2P05120 415 aa13.05□□□□□ -0.32
PSME1-206ENST00000559741 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
PSME1-206ENST00000559741 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
PSME1-206ENST00000559741 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
PSME1-206ENST00000559741 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
PSME1-206ENST00000559741 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
PSME1-206ENST00000559741 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
PSME1-206ENST00000559741 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
PSME1-206ENST00000559741 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
PSME1-206ENST00000559741 CARMIL3Q8ND23 1372 aa13.04□□□□□ -0.32
PSME1-206ENST00000559741 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
PSME1-206ENST00000559741 PDIA6Q15084 440 aa13.03□□□□□ -0.32
PSME1-206ENST00000559741 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
PSME1-206ENST00000559741 SETDB2Q96T68 719 aa13.03□□□□□ -0.32
PSME1-206ENST00000559741 IL16Q14005 1332 aa13.03□□□□□ -0.32
PSME1-206ENST00000559741 BRCA1P38398 1863 aaKnown RBP13.02□□□□□ -0.32
PSME1-206ENST00000559741 CHD4Q14839 1912 aa13.02□□□□□ -0.32
PSME1-206ENST00000559741 MYL6BP14649 208 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms