RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 CHRNA5P30532 468 aa32.26■■■□□ 2.75
PBX1-217ENST00000559578 ZBTB1Q9Y2K1 713 aa32.26■■■□□ 2.75
PBX1-217ENST00000559578 NPC1L1Q9UHC9 1359 aa32.26■■■□□ 2.75
PBX1-217ENST00000559578 C9orf131Q5VYM1 1079 aa32.25■■■□□ 2.75
PBX1-217ENST00000559578 TTC5Q8N0Z6 440 aa32.25■■■□□ 2.75
PBX1-217ENST00000559578 U2SURPO15042 1029 aaKnown RBP32.24■■■□□ 2.75
PBX1-217ENST00000559578 UBR2Q8IWV8 1755 aa32.23■■■□□ 2.75
PBX1-217ENST00000559578 TOMM70O94826 608 aa32.23■■■□□ 2.75
PBX1-217ENST00000559578 CNGB1Q14028 1251 aaPredicted RBP32.23■■■□□ 2.75
PBX1-217ENST00000559578 NFIXQ14938 502 aa32.22■■■□□ 2.75
PBX1-217ENST00000559578 COL3A1P02461 1466 aaPredicted RBP32.22■■■□□ 2.75
PBX1-217ENST00000559578 GAS2L2Q8NHY3 880 aa32.21■■■□□ 2.75
PBX1-217ENST00000559578 STARD3NLO95772 234 aa32.2■■■□□ 2.75
PBX1-217ENST00000559578 CANXP27824 592 aaKnown RBP32.2■■■□□ 2.75
PBX1-217ENST00000559578 TEFQ10587 303 aa32.2■■■□□ 2.75
PBX1-217ENST00000559578 NMRK2Q9NPI5 230 aa32.2■■■□□ 2.75
PBX1-217ENST00000559578 AFDNP55196 1824 aaKnown RBP32.2■■■□□ 2.75
PBX1-217ENST00000559578 GNAT3A8MTJ3 354 aa32.19■■■□□ 2.74
PBX1-217ENST00000559578 BCL2L12Q9HB09 334 aa32.17■■■□□ 2.74
PBX1-217ENST00000559578 RNF181Q9P0P0 153 aa32.17■■■□□ 2.74
PBX1-217ENST00000559578 NRXN2Q9P2S2 1712 aa32.17■■■□□ 2.74
PBX1-217ENST00000559578 A0A087WZG4 1122 aa32.16■■■□□ 2.74
PBX1-217ENST00000559578 SERPINB2P05120 415 aa32.16■■■□□ 2.74
PBX1-217ENST00000559578 APLP1P51693 650 aa32.15■■■□□ 2.74
PBX1-217ENST00000559578 ZNF790Q6PG37 636 aa32.15■■■□□ 2.74
PBX1-217ENST00000559578 IL17REQ8NFR9 667 aa32.15■■■□□ 2.74
PBX1-217ENST00000559578 TEX13AQ9BXU3 409 aaPredicted RBP32.15■■■□□ 2.74
PBX1-217ENST00000559578 ZNF496Q96IT1 587 aaPredicted RBP32.14■■■□□ 2.74
PBX1-217ENST00000559578 SBF1O95248 1867 aa32.13■■■□□ 2.73
PBX1-217ENST00000559578 EIF5P55010 431 aaKnown RBP32.13■■■□□ 2.73
PBX1-217ENST00000559578 C16orf71Q8IYS4 520 aaPredicted RBP32.13■■■□□ 2.73
PBX1-217ENST00000559578 KDM2BQ8NHM5 1336 aa32.13■■■□□ 2.73
PBX1-217ENST00000559578 HEG1Q9ULI3 1381 aa32.12■■■□□ 2.73
PBX1-217ENST00000559578 CFAP53Q96M91 514 aa32.11■■■□□ 2.73
PBX1-217ENST00000559578 SIPA1L3O60292 1781 aaPredicted RBP32.1■■■□□ 2.73
PBX1-217ENST00000559578 BICDL1Q6ZP65 573 aa32.1■■■□□ 2.73
PBX1-217ENST00000559578 DLEC1Q9Y238 1755 aa32.09■■■□□ 2.73
PBX1-217ENST00000559578 RBM46Q8TBY0 533 aaKnown RBP32.09■■■□□ 2.73
PBX1-217ENST00000559578 C2CD5Q86YS7 1000 aa32.08■■■□□ 2.73
PBX1-217ENST00000559578 TTLL6Q8N841 843 aa32.08■■■□□ 2.73
PBX1-217ENST00000559578 FMNL2Q96PY5 1086 aa32.08■■■□□ 2.73
PBX1-217ENST00000559578 ZNF330Q9Y3S2 320 aaPredicted RBP32.08■■■□□ 2.73
PBX1-217ENST00000559578 H0YIN7 160 aa32.07■■■□□ 2.72
PBX1-217ENST00000559578 PRKAR2BP31323 418 aa32.06■■■□□ 2.72
PBX1-217ENST00000559578 IFFO2Q5TF58 517 aa32.06■■■□□ 2.72
PBX1-217ENST00000559578 NPM2Q86SE8 214 aaKnown RBP32.06■■■□□ 2.72
PBX1-217ENST00000559578 CEMIPQ8WUJ3 1361 aa32.06■■■□□ 2.72
PBX1-217ENST00000559578 IL6STP40189 918 aaPredicted RBP32.05■■■□□ 2.72
PBX1-217ENST00000559578 RASSF7Q02833 373 aa32.05■■■□□ 2.72
PBX1-217ENST00000559578 PHACTR3Q96KR7 559 aa32.05■■■□□ 2.72
PBX1-217ENST00000559578 ZC3H4Q9UPT8 1303 aaKnown RBP32.04■■■□□ 2.72
PBX1-217ENST00000559578 NUDCQ9Y266 331 aa32.04■■■□□ 2.72
PBX1-217ENST00000559578 CARMIL3Q8ND23 1372 aa32.04■■■□□ 2.72
PBX1-217ENST00000559578 BTBD11A6QL63 1104 aa32.03■■■□□ 2.72
PBX1-217ENST00000559578 TBC1D9BQ66K14 1250 aa32.03■■■□□ 2.72
PBX1-217ENST00000559578 RSPH6AQ9H0K4 717 aa32.03■■■□□ 2.72
PBX1-217ENST00000559578 RRAGCQ9HB90 399 aa32.03■■■□□ 2.72
PBX1-217ENST00000559578 TBC1D2BQ9UPU7 963 aa32.03■■■□□ 2.72
PBX1-217ENST00000559578 SCN7AQ01118 1682 aa32.02■■■□□ 2.72
PBX1-217ENST00000559578 TNRC6CQ9HCJ0 1690 aaKnown RBP32.02■■■□□ 2.72
PBX1-217ENST00000559578 LMNB1P20700 586 aa32.02■■■□□ 2.72
PBX1-217ENST00000559578 FSTL1Q12841 308 aa32.01■■■□□ 2.71
PBX1-217ENST00000559578 PDZRN3Q9UPQ7 1066 aa32.01■■■□□ 2.71
PBX1-217ENST00000559578 PDE6BP35913 854 aa32■■■□□ 2.71
PBX1-217ENST00000559578 A1BGP04217 495 aa31.99■■■□□ 2.71
PBX1-217ENST00000559578 BRIP1Q9BX63 1249 aa31.98■■■□□ 2.71
PBX1-217ENST00000559578 KCNQ3O43525 872 aa31.97■■■□□ 2.71
PBX1-217ENST00000559578 U2AF1L5P0DN76 240 aaPredicted RBP31.97■■■□□ 2.71
PBX1-217ENST00000559578 U2AF1Q01081 240 aaKnown RBP eCLIP31.97■■■□□ 2.71
PBX1-217ENST00000559578 PRR5LQ6MZQ0 368 aa31.97■■■□□ 2.71
PBX1-217ENST00000559578 DNAJC5GQ8N7S2 189 aa31.97■■■□□ 2.71
PBX1-217ENST00000559578 RTF1Q92541 710 aaKnown RBP31.97■■■□□ 2.71
PBX1-217ENST00000559578 ZNF622Q969S3 477 aaKnown RBP eCLIP31.97■■■□□ 2.71
PBX1-217ENST00000559578 ANKRD31Q8N7Z5 1873 aa31.97■■■□□ 2.71
PBX1-217ENST00000559578 WDR90Q96KV7 1748 aa31.96■■■□□ 2.71
PBX1-217ENST00000559578 SETDB2Q96T68 719 aa31.96■■■□□ 2.71
PBX1-217ENST00000559578 PPP2R1AP30153 589 aa31.95■■■□□ 2.71
PBX1-217ENST00000559578 CCDC88AQ3V6T2 1871 aa31.95■■■□□ 2.7
PBX1-217ENST00000559578 NPHP1O15259 732 aa31.94■■■□□ 2.7
PBX1-217ENST00000559578 CAMTA2O94983 1202 aa31.94■■■□□ 2.7
PBX1-217ENST00000559578 GLTPD2A6NH11 291 aa31.93■■■□□ 2.7
PBX1-217ENST00000559578 PRELPP51888 382 aa31.93■■■□□ 2.7
PBX1-217ENST00000559578 NFKBIEO00221 500 aa31.92■■■□□ 2.7
PBX1-217ENST00000559578 DZIP3Q86Y13 1208 aaKnown RBP31.92■■■□□ 2.7
PBX1-217ENST00000559578 CCDC24Q8N4L8 307 aa31.92■■■□□ 2.7
PBX1-217ENST00000559578 CNBD1Q8NA66 436 aa31.92■■■□□ 2.7
PBX1-217ENST00000559578 SMC1BQ8NDV3 1235 aa31.92■■■□□ 2.7
PBX1-217ENST00000559578 USP16Q9Y5T5 823 aa31.92■■■□□ 2.7
PBX1-217ENST00000559578 MCM10Q7L590 875 aa31.91■■■□□ 2.7
PBX1-217ENST00000559578 TIAM2Q8IVF5 1701 aa31.91■■■□□ 2.7
PBX1-217ENST00000559578 ST5P78524 1137 aa31.9■■■□□ 2.7
PBX1-217ENST00000559578 BCORQ6W2J9 1755 aa31.89■■■□□ 2.7
PBX1-217ENST00000559578 SNRPA1P09661 255 aaKnown RBP31.89■■■□□ 2.7
PBX1-217ENST00000559578 VEGFAP15692 232 aaPredicted RBP31.89■■■□□ 2.7
PBX1-217ENST00000559578 COL11A2P13942 1736 aaPredicted RBP31.89■■■□□ 2.69
PBX1-217ENST00000559578 C21orf2O43822 256 aa31.88■■■□□ 2.69
PBX1-217ENST00000559578 ZNF219Q9P2Y4 722 aaPredicted RBP31.88■■■□□ 2.69
PBX1-217ENST00000559578 CNKSR1Q969H4 720 aa31.87■■■□□ 2.69
PBX1-217ENST00000559578 HTATSF1O43719 755 aaKnown RBP31.86■■■□□ 2.69
PBX1-217ENST00000559578 PIP4K2AP48426 406 aaPredicted RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms