RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 FLIIQ13045 1269 aa18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 CCDC136Q96JN2 1154 aa18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 API5Q9BZZ5 524 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 PTPRCP08575 1304 aa18.21■□□□□ 0.5
RABGGTA-209ENST00000559551 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
RABGGTA-209ENST00000559551 MS4A1P11836 297 aa18.2■□□□□ 0.5
RABGGTA-209ENST00000559551 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
RABGGTA-209ENST00000559551 SBF2Q86WG5 1849 aa18.2■□□□□ 0.5
RABGGTA-209ENST00000559551 F6X3S4 739 aa18.19■□□□□ 0.5
RABGGTA-209ENST00000559551 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-209ENST00000559551 ITPRIPQ8IWB1 547 aa18.19■□□□□ 0.5
RABGGTA-209ENST00000559551 SNRPA1P09661 255 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-209ENST00000559551 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-209ENST00000559551 TJP1Q07157 1748 aa18.18■□□□□ 0.5
RABGGTA-209ENST00000559551 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-209ENST00000559551 ACSBG1Q96GR2 724 aa18.18■□□□□ 0.5
RABGGTA-209ENST00000559551 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-209ENST00000559551 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
RABGGTA-209ENST00000559551 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
RABGGTA-209ENST00000559551 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-209ENST00000559551 SLC4A9Q96Q91 983 aa18.17■□□□□ 0.5
RABGGTA-209ENST00000559551 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 ZBTB7BO15156 539 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 KCNQ2O43526 872 aa18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
RABGGTA-209ENST00000559551 FKBP5Q13451 457 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-209ENST00000559551 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
RABGGTA-209ENST00000559551 ADCY9O60503 1353 aa18.15■□□□□ 0.5
RABGGTA-209ENST00000559551 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
RABGGTA-209ENST00000559551 FAM182BQ5T319 152 aa18.14■□□□□ 0.5
RABGGTA-209ENST00000559551 PTF1AQ7RTS3 328 aa18.14■□□□□ 0.5
RABGGTA-209ENST00000559551 BTAF1O14981 1849 aa18.14■□□□□ 0.49
RABGGTA-209ENST00000559551 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
RABGGTA-209ENST00000559551 A0A0G2JS52 829 aa18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 IGHDP01880 384 aa18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
RABGGTA-209ENST00000559551 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
RABGGTA-209ENST00000559551 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
RABGGTA-209ENST00000559551 EP400Q96L91 3159 aa18.12■□□□□ 0.49
RABGGTA-209ENST00000559551 ARFGEF2Q9Y6D5 1785 aa18.12■□□□□ 0.49
RABGGTA-209ENST00000559551 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-209ENST00000559551 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 MYL6BP14649 208 aa18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 SLC4A10Q6U841 1118 aa18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 CHMP4AQ9BY43 222 aa18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 NUP188Q5SRE5 1749 aa18.11■□□□□ 0.49
RABGGTA-209ENST00000559551 PI4KAP2A4QPH2 592 aa18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 A1BGP04217 495 aa18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 AAMPQ13685 434 aa18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 PI4KAP1Q8N8J0 262 aa18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
RABGGTA-209ENST00000559551 COL5A3P25940 1745 aaPredicted RBP18.08■□□□□ 0.49
RABGGTA-209ENST00000559551 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.49
RABGGTA-209ENST00000559551 MEIS3Q99687 375 aa18.08■□□□□ 0.49
RABGGTA-209ENST00000559551 ZNF831Q5JPB2 1677 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 CCT4P50991 539 aaKnown RBP18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 DNAAF4Q8WXU2 420 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 RREB1Q92766 1687 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 BEND3Q5T5X7 828 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 KSR2Q6VAB6 950 aa18.07■□□□□ 0.48
RABGGTA-209ENST00000559551 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
RABGGTA-209ENST00000559551 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-209ENST00000559551 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
RABGGTA-209ENST00000559551 LY75O60449 1722 aa18.05■□□□□ 0.48
RABGGTA-209ENST00000559551 SIRT2Q8IXJ6 389 aa18.05■□□□□ 0.48
RABGGTA-209ENST00000559551 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
RABGGTA-209ENST00000559551 CYP19A1P11511 503 aaPredicted RBP18.05■□□□□ 0.48
RABGGTA-209ENST00000559551 ITPK1Q13572 414 aa18.04■□□□□ 0.48
RABGGTA-209ENST00000559551 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-209ENST00000559551 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-209ENST00000559551 TTLL7Q6ZT98 887 aa18.03■□□□□ 0.48
RABGGTA-209ENST00000559551 USP44Q9H0E7 712 aa18.03■□□□□ 0.48
RABGGTA-209ENST00000559551 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
RABGGTA-209ENST00000559551 SIK1P57059 783 aa18.03■□□□□ 0.48
RABGGTA-209ENST00000559551 TAF1LQ8IZX4 1826 aa18.03■□□□□ 0.48
RABGGTA-209ENST00000559551 RBM6P78332 1123 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-209ENST00000559551 TEX13AQ9BXU3 409 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-209ENST00000559551 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
RABGGTA-209ENST00000559551 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-209ENST00000559551 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
RABGGTA-209ENST00000559551 SRCIN1Q9C0H9 1055 aa18.01■□□□□ 0.47
RABGGTA-209ENST00000559551 ZBTB1Q9Y2K1 713 aa18.01■□□□□ 0.47
RABGGTA-209ENST00000559551 RBM19Q9Y4C8 960 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms