RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 IFT57Q9NWB7 429 aa24.38■■□□□ 1.49
AC055874.1-202ENST00000559457 USP16Q9Y5T5 823 aa24.38■■□□□ 1.49
AC055874.1-202ENST00000559457 LAMB4A4D0S4 1761 aa24.38■■□□□ 1.49
AC055874.1-202ENST00000559457 MSH5O43196 834 aa24.37■■□□□ 1.49
AC055874.1-202ENST00000559457 STARD3NLO95772 234 aa24.37■■□□□ 1.49
AC055874.1-202ENST00000559457 GNAI1P63096 354 aa24.37■■□□□ 1.49
AC055874.1-202ENST00000559457 MBIPQ9NS73 344 aa24.37■■□□□ 1.49
AC055874.1-202ENST00000559457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.36■■□□□ 1.49
AC055874.1-202ENST00000559457 GIGYF1O75420 1035 aaPredicted RBP24.36■■□□□ 1.49
AC055874.1-202ENST00000559457 RTCBQ9Y3I0 505 aaKnown RBP24.36■■□□□ 1.49
AC055874.1-202ENST00000559457 RPS6KA4O75676 772 aa24.35■■□□□ 1.49
AC055874.1-202ENST00000559457 KRT24Q2M2I5 525 aa24.35■■□□□ 1.49
AC055874.1-202ENST00000559457 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
AC055874.1-202ENST00000559457 ZBTB1Q9Y2K1 713 aa24.35■■□□□ 1.49
AC055874.1-202ENST00000559457 ZBTB7AO95365 584 aa24.34■■□□□ 1.49
AC055874.1-202ENST00000559457 A1BGP04217 495 aa24.34■■□□□ 1.49
AC055874.1-202ENST00000559457 CANXP27824 592 aaKnown RBP24.34■■□□□ 1.49
AC055874.1-202ENST00000559457 SSFA2P28290 1259 aa24.34■■□□□ 1.49
AC055874.1-202ENST00000559457 C4AP0C0L4 1744 aa24.33■■□□□ 1.49
AC055874.1-202ENST00000559457 WDR63Q8IWG1 891 aa24.33■■□□□ 1.49
AC055874.1-202ENST00000559457 FLAD1Q8NFF5 587 aa24.33■■□□□ 1.49
AC055874.1-202ENST00000559457 TSR2Q969E8 191 aaKnown RBP24.32■■□□□ 1.48
AC055874.1-202ENST00000559457 SOS1Q07889 1333 aaPredicted RBP24.32■■□□□ 1.48
AC055874.1-202ENST00000559457 IL16Q14005 1332 aa24.32■■□□□ 1.48
AC055874.1-202ENST00000559457 PIP4K2AP48426 406 aaPredicted RBP24.31■■□□□ 1.48
AC055874.1-202ENST00000559457 TRAPPC3LQ5T215 181 aa24.31■■□□□ 1.48
AC055874.1-202ENST00000559457 ARHGEF1Q92888 912 aaKnown RBP24.3■■□□□ 1.48
AC055874.1-202ENST00000559457 ATF5Q9Y2D1 282 aaPredicted RBP24.3■■□□□ 1.48
AC055874.1-202ENST00000559457 ZNF521Q96K83 1311 aa24.3■■□□□ 1.48
AC055874.1-202ENST00000559457 ADRA2BP18089 450 aa24.28■■□□□ 1.48
AC055874.1-202ENST00000559457 SPINK5Q9NQ38 1064 aaPredicted RBP24.28■■□□□ 1.48
AC055874.1-202ENST00000559457 ZNF330Q9Y3S2 320 aaPredicted RBP24.28■■□□□ 1.48
AC055874.1-202ENST00000559457 EIF2S2P20042 333 aaKnown RBP24.27■■□□□ 1.48
AC055874.1-202ENST00000559457 SLC16A10Q8TF71 515 aa24.27■■□□□ 1.48
AC055874.1-202ENST00000559457 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
AC055874.1-202ENST00000559457 COL15A1P39059 1388 aa24.27■■□□□ 1.48
AC055874.1-202ENST00000559457 NBPF26B4DH59 902 aa24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 RFC4P35249 363 aa24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 EIF5P55010 431 aaKnown RBP24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 DUSP27Q5VZP5 1158 aa24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 MSL1Q68DK7 614 aa24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 NBPF10Q6P3W6 841 aaKnown RBP24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 NBPF15Q8N660 670 aa24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 NECTIN2Q92692 538 aa24.26■■□□□ 1.47
AC055874.1-202ENST00000559457 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
AC055874.1-202ENST00000559457 C8orf58Q8NAV2 365 aa24.25■■□□□ 1.47
AC055874.1-202ENST00000559457 SPON1Q9HCB6 807 aa24.25■■□□□ 1.47
AC055874.1-202ENST00000559457 SRP68Q9UHB9 627 aaKnown RBP24.25■■□□□ 1.47
AC055874.1-202ENST00000559457 FANCIQ9NVI1 1328 aa24.25■■□□□ 1.47
AC055874.1-202ENST00000559457 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
AC055874.1-202ENST00000559457 IL6STP40189 918 aaPredicted RBP24.24■■□□□ 1.47
AC055874.1-202ENST00000559457 LRP5O75197 1615 aa24.24■■□□□ 1.47
AC055874.1-202ENST00000559457 HNRNPUQ00839 825 aaKnown RBP eCLIP24.22■■□□□ 1.47
AC055874.1-202ENST00000559457 TSPYL6Q8N831 410 aa24.22■■□□□ 1.47
AC055874.1-202ENST00000559457 USP42Q9H9J4 1324 aaKnown RBP24.21■■□□□ 1.47
AC055874.1-202ENST00000559457 HOXB7P09629 217 aa24.21■■□□□ 1.47
AC055874.1-202ENST00000559457 GOLGA2Q08379 1002 aa24.21■■□□□ 1.47
AC055874.1-202ENST00000559457 ARXQ96QS3 562 aa24.21■■□□□ 1.47
AC055874.1-202ENST00000559457 A0A087WZG4 1122 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 ZPR1O75312 459 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 MYL6BP14649 208 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 PTGER2P43116 358 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 HDGFL1Q5TGJ6 251 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 NPM2Q86SE8 214 aaKnown RBP24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 MYH16Q9H6N6 1097 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 TBC1D2BQ9UPU7 963 aa24.2■■□□□ 1.46
AC055874.1-202ENST00000559457 ANXA1P04083 346 aa24.19■■□□□ 1.46
AC055874.1-202ENST00000559457 GYS1P13807 737 aa24.19■■□□□ 1.46
AC055874.1-202ENST00000559457 PROSER3Q2NL68 480 aa24.19■■□□□ 1.46
AC055874.1-202ENST00000559457 USPL1Q5W0Q7 1092 aa24.19■■□□□ 1.46
AC055874.1-202ENST00000559457 NARFQ9UHQ1 456 aa24.19■■□□□ 1.46
AC055874.1-202ENST00000559457 ERBB4Q15303 1308 aa24.18■■□□□ 1.46
AC055874.1-202ENST00000559457 EXOSC9Q06265 439 aaKnown RBP24.18■■□□□ 1.46
AC055874.1-202ENST00000559457 PDIA6Q15084 440 aa24.18■■□□□ 1.46
AC055874.1-202ENST00000559457 CDCA7LQ96GN5 454 aa24.18■■□□□ 1.46
AC055874.1-202ENST00000559457 SGIP1Q9BQI5 828 aa24.18■■□□□ 1.46
AC055874.1-202ENST00000559457 SCN7AQ01118 1682 aa24.18■■□□□ 1.46
AC055874.1-202ENST00000559457 BCORQ6W2J9 1755 aa24.17■■□□□ 1.46
AC055874.1-202ENST00000559457 SLFN5Q08AF3 891 aa24.16■■□□□ 1.46
AC055874.1-202ENST00000559457 TWISTNBQ3B726 338 aaPredicted RBP24.16■■□□□ 1.46
AC055874.1-202ENST00000559457 DZIP3Q86Y13 1208 aaKnown RBP24.16■■□□□ 1.46
AC055874.1-202ENST00000559457 CHPF2Q9P2E5 772 aa24.16■■□□□ 1.46
AC055874.1-202ENST00000559457 E9PSI1 815 aa24.15■■□□□ 1.46
AC055874.1-202ENST00000559457 POLD1P28340 1107 aa24.15■■□□□ 1.46
AC055874.1-202ENST00000559457 FKBP8Q14318 412 aa24.15■■□□□ 1.46
AC055874.1-202ENST00000559457 BCL2L12Q9HB09 334 aa24.15■■□□□ 1.46
AC055874.1-202ENST00000559457 CAMTA2O94983 1202 aa24.14■■□□□ 1.45
AC055874.1-202ENST00000559457 LRP10Q7Z4F1 713 aa24.14■■□□□ 1.45
AC055874.1-202ENST00000559457 NLGN1Q8N2Q7 840 aa24.14■■□□□ 1.45
AC055874.1-202ENST00000559457 DDX21Q9NR30 783 aaKnown RBP eCLIP24.14■■□□□ 1.45
AC055874.1-202ENST00000559457 TTLL7Q6ZT98 887 aa24.13■■□□□ 1.45
AC055874.1-202ENST00000559457 PPP1R1BQ9UD71 204 aaPredicted RBP24.13■■□□□ 1.45
AC055874.1-202ENST00000559457 TCERG1O14776 1098 aaKnown RBP24.12■■□□□ 1.45
AC055874.1-202ENST00000559457 MMP10P09238 476 aa24.12■■□□□ 1.45
AC055874.1-202ENST00000559457 DBF4Q9UBU7 674 aaPredicted RBP24.12■■□□□ 1.45
AC055874.1-202ENST00000559457 NUP98P52948 1817 aa24.12■■□□□ 1.45
AC055874.1-202ENST00000559457 VAMP4O75379 141 aa24.1■■□□□ 1.45
AC055874.1-202ENST00000559457 CCDC30Q5VVM6 783 aa24.1■■□□□ 1.45
AC055874.1-202ENST00000559457 XAGE3Q8WTP9 111 aa24.1■■□□□ 1.45
AC055874.1-202ENST00000559457 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms