RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 RNMTO43148 476 aaKnown RBP7.9□□□□□ -1.14
USP3-212ENST00000559276 HMOX1P09601 288 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 CYP19A1P11511 503 aaPredicted RBP7.9□□□□□ -1.14
USP3-212ENST00000559276 HSPA6P17066 643 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 SLC39A6Q13433 755 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 MTHFSDQ2M296 383 aaKnown RBP7.9□□□□□ -1.14
USP3-212ENST00000559276 BCL2L12Q9HB09 334 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 CCDC87Q9NVE4 849 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 BCS1LQ9Y276 419 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 CHRNA5P30532 468 aa7.89□□□□□ -1.15
USP3-212ENST00000559276 PARP3Q9Y6F1 533 aa7.89□□□□□ -1.15
USP3-212ENST00000559276 ANKRD31Q8N7Z5 1873 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 FCHSD2O94868 740 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 PRELPP51888 382 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 USPL1Q5W0Q7 1092 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 ARHGAP27Q6ZUM4 889 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 NMRK2Q9NPI5 230 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 ZBTB1Q9Y2K1 713 aa7.88□□□□□ -1.15
USP3-212ENST00000559276 COL15A1P39059 1388 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 CARMIL3Q8ND23 1372 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 NPC1L1Q9UHC9 1359 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 DIAPH1O60610 1272 aaKnown RBP7.87□□□□□ -1.15
USP3-212ENST00000559276 NFIXQ14938 502 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 CC2D1BQ5T0F9 858 aaKnown RBP7.87□□□□□ -1.15
USP3-212ENST00000559276 DNAJC5GQ8N7S2 189 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 IL17REQ8NFR9 667 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 PIM2Q9P1W9 311 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 NARFQ9UHQ1 456 aa7.87□□□□□ -1.15
USP3-212ENST00000559276 SCN7AQ01118 1682 aa7.86□□□□□ -1.15
USP3-212ENST00000559276 TOMM70O94826 608 aa7.86□□□□□ -1.15
USP3-212ENST00000559276 C9orf131Q5VYM1 1079 aa7.86□□□□□ -1.15
USP3-212ENST00000559276 VSIG10Q8N0Z9 540 aa7.86□□□□□ -1.15
USP3-212ENST00000559276 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
USP3-212ENST00000559276 WDR90Q96KV7 1748 aa7.86□□□□□ -1.15
USP3-212ENST00000559276 NEFLP07196 543 aa7.85□□□□□ -1.15
USP3-212ENST00000559276 EIF5P55010 431 aaKnown RBP7.85□□□□□ -1.15
USP3-212ENST00000559276 DALRD3Q5D0E6 543 aaKnown RBP7.85□□□□□ -1.15
USP3-212ENST00000559276 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
USP3-212ENST00000559276 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
USP3-212ENST00000559276 PHACTR3Q96KR7 559 aa7.85□□□□□ -1.15
USP3-212ENST00000559276 TNRC6CQ9HCJ0 1690 aaKnown RBP7.85□□□□□ -1.15
USP3-212ENST00000559276 CCDC88AQ3V6T2 1871 aa7.85□□□□□ -1.15
USP3-212ENST00000559276 CEMIPQ8WUJ3 1361 aa7.84□□□□□ -1.15
USP3-212ENST00000559276 BCORQ6W2J9 1755 aa7.84□□□□□ -1.15
USP3-212ENST00000559276 TIAM2Q8IVF5 1701 aa7.84□□□□□ -1.15
USP3-212ENST00000559276 KCNQ3O43525 872 aa7.84□□□□□ -1.15
USP3-212ENST00000559276 ZPR1O75312 459 aa7.84□□□□□ -1.15
USP3-212ENST00000559276 CANXP27824 592 aaKnown RBP7.84□□□□□ -1.15
USP3-212ENST00000559276 RASSF7Q02833 373 aa7.84□□□□□ -1.15
USP3-212ENST00000559276 HEG1Q9ULI3 1381 aa7.84□□□□□ -1.16
USP3-212ENST00000559276 SERPINB2P05120 415 aa7.83□□□□□ -1.16
USP3-212ENST00000559276 HTRA3P83110 453 aa7.83□□□□□ -1.16
USP3-212ENST00000559276 TBC1D9BQ66K14 1250 aa7.83□□□□□ -1.16
USP3-212ENST00000559276 ZNF790Q6PG37 636 aa7.83□□□□□ -1.16
USP3-212ENST00000559276 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
USP3-212ENST00000559276 RNF181Q9P0P0 153 aa7.83□□□□□ -1.16
USP3-212ENST00000559276 FER1L6Q2WGJ9 1857 aa7.83□□□□□ -1.16
USP3-212ENST00000559276 PCNTO95613 3336 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 GNAT3A8MTJ3 354 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 NFKBIEO00221 500 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 APLP1P51693 650 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 RSPH6AQ9H0K4 717 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 RRAGCQ9HB90 399 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 ARFGEF2Q9Y6D5 1785 aa7.82□□□□□ -1.16
USP3-212ENST00000559276 SLX4Q8IY92 1834 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 PRAMEF22A3QJZ6 481 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 POTECB2RU33 542 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 U2SURPO15042 1029 aaKnown RBP7.81□□□□□ -1.16
USP3-212ENST00000559276 CAMTA2O94983 1202 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 A1BGP04217 495 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 CNGB1Q14028 1251 aaPredicted RBP7.81□□□□□ -1.16
USP3-212ENST00000559276 PRR5LQ6MZQ0 368 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 BICDL1Q6ZP65 573 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 C2CD5Q86YS7 1000 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 CCDC24Q8N4L8 307 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 TBC1D2BQ9UPU7 963 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 DICER1Q9UPY3 1922 aaKnown RBP7.81□□□□□ -1.16
USP3-212ENST00000559276 CACNA1SQ13698 1873 aa7.81□□□□□ -1.16
USP3-212ENST00000559276 STARD3NLO95772 234 aa7.8□□□□□ -1.16
USP3-212ENST00000559276 PRKAR2BP31323 418 aa7.8□□□□□ -1.16
USP3-212ENST00000559276 IL6STP40189 918 aaPredicted RBP7.8□□□□□ -1.16
USP3-212ENST00000559276 TTC5Q8N0Z6 440 aa7.8□□□□□ -1.16
USP3-212ENST00000559276 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
USP3-212ENST00000559276 GAS2L2Q8NHY3 880 aa7.8□□□□□ -1.16
USP3-212ENST00000559276 USP16Q9Y5T5 823 aa7.8□□□□□ -1.16
USP3-212ENST00000559276 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
USP3-212ENST00000559276 GLTPD2A6NH11 291 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 NBPF26B4DH59 902 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 H0YIN7 160 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 ANP32CO43423 234 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 LMNB1P20700 586 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 PPP2R1AP30153 589 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 PIP4K2AP48426 406 aaPredicted RBP7.79□□□□□ -1.16
USP3-212ENST00000559276 TEFQ10587 303 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 FSTL1Q12841 308 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms