RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MBIPQ9NS73 344 aa15.01□□□□□ -0.01
SNX1-204ENST00000559061 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
SNX1-204ENST00000559061 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
SNX1-204ENST00000559061 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
SNX1-204ENST00000559061 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
SNX1-204ENST00000559061 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
SNX1-204ENST00000559061 AK7Q96M32 723 aa15□□□□□ -0.01
SNX1-204ENST00000559061 CFAP44Q96MT7 982 aa15□□□□□ -0.01
SNX1-204ENST00000559061 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
SNX1-204ENST00000559061 BABAM1Q9NWV8 329 aa15□□□□□ -0.01
SNX1-204ENST00000559061 TFCP2L1Q9NZI6 479 aa15□□□□□ -0.01
SNX1-204ENST00000559061 TSPYL4Q9UJ04 414 aa15□□□□□ -0.01
SNX1-204ENST00000559061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
SNX1-204ENST00000559061 CCDC87Q9NVE4 849 aa14.99□□□□□ -0.01
SNX1-204ENST00000559061 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
SNX1-204ENST00000559061 NBPF26B4DH59 902 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 RPS6KA4O75676 772 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 PHF14O94880 888 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 ZBTB7AO95365 584 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 A1BGP04217 495 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 SSFA2P28290 1259 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 PTGER2P43116 358 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 PIP4K2AP48426 406 aaPredicted RBP14.98□□□□□ -0.01
SNX1-204ENST00000559061 NBPF10Q6P3W6 841 aaKnown RBP14.98□□□□□ -0.01
SNX1-204ENST00000559061 NBPF15Q8N660 670 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 IFT57Q9NWB7 429 aa14.98□□□□□ -0.01
SNX1-204ENST00000559061 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
SNX1-204ENST00000559061 EIF5P55010 431 aaKnown RBP14.96□□□□□ -0.01
SNX1-204ENST00000559061 LRP10Q7Z4F1 713 aa14.96□□□□□ -0.01
SNX1-204ENST00000559061 ARHGEF1Q92888 912 aaKnown RBP14.96□□□□□ -0.01
SNX1-204ENST00000559061 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.01
SNX1-204ENST00000559061 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
SNX1-204ENST00000559061 COL15A1P39059 1388 aa14.96□□□□□ -0.02
SNX1-204ENST00000559061 IL16Q14005 1332 aa14.95□□□□□ -0.02
SNX1-204ENST00000559061 SRP68Q9UHB9 627 aaKnown RBP14.95□□□□□ -0.02
SNX1-204ENST00000559061 PDIA6Q15084 440 aa14.94□□□□□ -0.02
SNX1-204ENST00000559061 TSPYL6Q8N831 410 aa14.94□□□□□ -0.02
SNX1-204ENST00000559061 C8orf58Q8NAV2 365 aa14.94□□□□□ -0.02
SNX1-204ENST00000559061 BCL2L12Q9HB09 334 aa14.94□□□□□ -0.02
SNX1-204ENST00000559061 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
SNX1-204ENST00000559061 RTCBQ9Y3I0 505 aaKnown RBP14.94□□□□□ -0.02
SNX1-204ENST00000559061 USP42Q9H9J4 1324 aaKnown RBP14.93□□□□□ -0.02
SNX1-204ENST00000559061 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 STARD3NLO95772 234 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 CANXP27824 592 aaKnown RBP14.93□□□□□ -0.02
SNX1-204ENST00000559061 GNAI1P63096 354 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 PROSER3Q2NL68 480 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 MSL1Q68DK7 614 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 TEX13AQ9BXU3 409 aaPredicted RBP14.93□□□□□ -0.02
SNX1-204ENST00000559061 MTFR1LQ9H019 292 aa14.93□□□□□ -0.02
SNX1-204ENST00000559061 GYS1P13807 737 aa14.92□□□□□ -0.02
SNX1-204ENST00000559061 KIAA1551Q9HCM1 1747 aa14.92□□□□□ -0.02
SNX1-204ENST00000559061 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
SNX1-204ENST00000559061 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
SNX1-204ENST00000559061 TRAPPC3LQ5T215 181 aa14.91□□□□□ -0.02
SNX1-204ENST00000559061 FLAD1Q8NFF5 587 aa14.91□□□□□ -0.02
SNX1-204ENST00000559061 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
SNX1-204ENST00000559061 AFDNP55196 1824 aaKnown RBP14.91□□□□□ -0.02
SNX1-204ENST00000559061 KIF13BQ9NQT8 1826 aa14.9□□□□□ -0.02
SNX1-204ENST00000559061 ANXA1P04083 346 aa14.9□□□□□ -0.02
SNX1-204ENST00000559061 CALD1Q05682 793 aaKnown RBP14.9□□□□□ -0.02
SNX1-204ENST00000559061 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
SNX1-204ENST00000559061 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
SNX1-204ENST00000559061 NUP98P52948 1817 aa14.89□□□□□ -0.03
SNX1-204ENST00000559061 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
SNX1-204ENST00000559061 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
SNX1-204ENST00000559061 FKBP8Q14318 412 aa14.89□□□□□ -0.03
SNX1-204ENST00000559061 CDCA7LQ96GN5 454 aa14.89□□□□□ -0.03
SNX1-204ENST00000559061 SPON1Q9HCB6 807 aa14.89□□□□□ -0.03
SNX1-204ENST00000559061 HOXB7P09629 217 aa14.88□□□□□ -0.03
SNX1-204ENST00000559061 USPL1Q5W0Q7 1092 aa14.88□□□□□ -0.03
SNX1-204ENST00000559061 NECTIN2Q92692 538 aa14.88□□□□□ -0.03
SNX1-204ENST00000559061 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
SNX1-204ENST00000559061 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
SNX1-204ENST00000559061 ELL2O00472 640 aaPredicted RBP14.87□□□□□ -0.03
SNX1-204ENST00000559061 EIF2S2P20042 333 aaKnown RBP14.87□□□□□ -0.03
SNX1-204ENST00000559061 DDR1Q08345 913 aa14.87□□□□□ -0.03
SNX1-204ENST00000559061 TTLL7Q6ZT98 887 aa14.87□□□□□ -0.03
SNX1-204ENST00000559061 TRMT2AQ8IZ69 625 aaKnown RBP14.87□□□□□ -0.03
SNX1-204ENST00000559061 CHPF2Q9P2E5 772 aa14.87□□□□□ -0.03
SNX1-204ENST00000559061 TBC1D2BQ9UPU7 963 aa14.87□□□□□ -0.03
SNX1-204ENST00000559061 ANKRD36CQ5JPF3 1778 aa14.86□□□□□ -0.03
SNX1-204ENST00000559061 ARFGEF2Q9Y6D5 1785 aa14.86□□□□□ -0.03
SNX1-204ENST00000559061 RFC4P35249 363 aa14.86□□□□□ -0.03
SNX1-204ENST00000559061 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
SNX1-204ENST00000559061 ANKRD31Q8N7Z5 1873 aa14.85□□□□□ -0.03
SNX1-204ENST00000559061 MYL6BP14649 208 aa14.85□□□□□ -0.03
SNX1-204ENST00000559061 TM4SF1P30408 202 aa14.85□□□□□ -0.03
SNX1-204ENST00000559061 EXOSC9Q06265 439 aaKnown RBP14.85□□□□□ -0.03
SNX1-204ENST00000559061 HDGFL1Q5TGJ6 251 aa14.85□□□□□ -0.03
SNX1-204ENST00000559061 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
SNX1-204ENST00000559061 VAMP4O75379 141 aa14.84□□□□□ -0.03
SNX1-204ENST00000559061 HLFQ16534 295 aa14.84□□□□□ -0.03
SNX1-204ENST00000559061 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
SNX1-204ENST00000559061 DDX21Q9NR30 783 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNX1-204ENST00000559061 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
SNX1-204ENST00000559061 MMP10P09238 476 aa14.83□□□□□ -0.04
SNX1-204ENST00000559061 GOLGA2Q08379 1002 aa14.83□□□□□ -0.04
SNX1-204ENST00000559061 NFIXQ14938 502 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms