RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 TMEM229AB2RXF0 380 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 MAP2K3P46734 347 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
CASC4-206ENST00000558847 TRIM50Q86XT4 487 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 XAGE2Q96GT9 111 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 KRTAP4-6Q9BYQ5 205 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.14
CASC4-206ENST00000558847 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.14
CASC4-206ENST00000558847 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.14
CASC4-206ENST00000558847 DKK1O94907 266 aa7.95□□□□□ -1.14
CASC4-206ENST00000558847 LMOD1P29536 600 aaPredicted RBP7.95□□□□□ -1.14
CASC4-206ENST00000558847 GDF10P55107 478 aa7.95□□□□□ -1.14
CASC4-206ENST00000558847 CFHR5Q9BXR6 569 aa7.95□□□□□ -1.14
CASC4-206ENST00000558847 OXCT2Q9BYC2 517 aaPredicted RBP7.95□□□□□ -1.14
CASC4-206ENST00000558847 RUBCNLQ9H714 662 aa7.95□□□□□ -1.14
CASC4-206ENST00000558847 PATL2C9JE40 543 aaKnown RBP7.94□□□□□ -1.14
CASC4-206ENST00000558847 INHAP05111 366 aa7.94□□□□□ -1.14
CASC4-206ENST00000558847 SIX5Q8N196 739 aa7.94□□□□□ -1.14
CASC4-206ENST00000558847 OGFOD1Q8N543 542 aa7.94□□□□□ -1.14
CASC4-206ENST00000558847 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
CASC4-206ENST00000558847 OIP5O43482 229 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 ATP1A2P50993 1020 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 SRPK2P78362 688 aaKnown RBP7.93□□□□□ -1.14
CASC4-206ENST00000558847 CRTC2Q53ET0 693 aaPredicted RBP7.93□□□□□ -1.14
CASC4-206ENST00000558847 C4orf17Q53FE4 359 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 RETREG2Q8NC44 543 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 DCAF5Q96JK2 942 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 RRAGCQ9HB90 399 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 DNAAF2Q9NVR5 837 aaKnown RBP7.93□□□□□ -1.14
CASC4-206ENST00000558847 USTQ9Y2C2 406 aa7.93□□□□□ -1.14
CASC4-206ENST00000558847 MSTNO14793 375 aa7.92□□□□□ -1.14
CASC4-206ENST00000558847 MSX1P28360 303 aa7.92□□□□□ -1.14
CASC4-206ENST00000558847 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
CASC4-206ENST00000558847 TLR1Q15399 786 aa7.92□□□□□ -1.14
CASC4-206ENST00000558847 GALNT6Q8NCL4 622 aa7.92□□□□□ -1.14
CASC4-206ENST00000558847 TPCN2Q8NHX9 752 aa7.92□□□□□ -1.14
CASC4-206ENST00000558847 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
CASC4-206ENST00000558847 ZNF358Q9NW07 568 aa7.92□□□□□ -1.14
CASC4-206ENST00000558847 FAM196BA6NMK8 535 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L15C9J2P7 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L10C9JJH3 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L13C9JLJ4 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L12C9JPN9 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L11C9JVI0 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L21D6R901 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L18D6R9N7 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L22D6RA61 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L17D6RBQ6 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L19D6RCP7 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L20D6RJB6 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 PSME1Q06323 249 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 USP17L24Q0WX57 530 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 PTK7Q13308 1070 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 PLA2G4EQ3MJ16 856 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 RHBDD1Q8TEB9 315 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 KLRG1Q96E93 195 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 SLC4A9Q96Q91 983 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 LRRC4BQ9NT99 713 aa7.91□□□□□ -1.14
CASC4-206ENST00000558847 THBS1P07996 1170 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 BMP4P12644 408 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 RASA1P20936 1047 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 RFX1P22670 979 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 AMPD1P23109 780 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 EPHA4P54764 986 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 LBRQ14739 615 aaKnown RBP7.9□□□□□ -1.14
CASC4-206ENST00000558847 CCDC102BQ68D86 513 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 ZNF295-AS1Q8N0V1 137 aa7.9□□□□□ -1.14
CASC4-206ENST00000558847 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.9□□□□□ -1.14
CASC4-206ENST00000558847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.89□□□□□ -1.15
CASC4-206ENST00000558847 PLA2G4AP47712 749 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 MTFR1Q15390 333 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 AIDAQ96BJ3 306 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 ABHD17AQ96GS6 310 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 VRTNQ9H8Y1 702 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 SERTAD1Q9UHV2 236 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 GDF2Q9UK05 429 aaPredicted RBP7.89□□□□□ -1.15
CASC4-206ENST00000558847 IQSEC3Q9UPP2 1182 aaPredicted RBP7.89□□□□□ -1.15
CASC4-206ENST00000558847 USP3Q9Y6I4 520 aa7.89□□□□□ -1.15
CASC4-206ENST00000558847 SHISA8B8ZZ34 492 aa7.88□□□□□ -1.15
CASC4-206ENST00000558847 SMTNP53814 917 aa7.88□□□□□ -1.15
CASC4-206ENST00000558847 SNRPNP63162 240 aaKnown RBP7.88□□□□□ -1.15
CASC4-206ENST00000558847 PPARGC1BQ86YN6 1023 aaKnown RBP7.88□□□□□ -1.15
CASC4-206ENST00000558847 EDARADDQ8WWZ3 215 aa7.88□□□□□ -1.15
CASC4-206ENST00000558847 MKL2Q9ULH7 1088 aa7.88□□□□□ -1.15
CASC4-206ENST00000558847 ATXN7L1Q9ULK2 861 aaPredicted RBP7.88□□□□□ -1.15
CASC4-206ENST00000558847 M0R2N6 131 aa7.87□□□□□ -1.15
CASC4-206ENST00000558847 ATG7O95352 703 aa7.87□□□□□ -1.15
CASC4-206ENST00000558847 FGFR3P22607 806 aa7.87□□□□□ -1.15
CASC4-206ENST00000558847 GOLGA6L1Q8N7Z2 621 aa7.87□□□□□ -1.15
CASC4-206ENST00000558847 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
CASC4-206ENST00000558847 ZMIZ1Q9ULJ6 1067 aa7.87□□□□□ -1.15
CASC4-206ENST00000558847 A6NJY4 79 aa7.86□□□□□ -1.15
CASC4-206ENST00000558847 SFI1A8K8P3 1242 aa7.86□□□□□ -1.15
CASC4-206ENST00000558847 DPYDQ12882 1025 aa7.86□□□□□ -1.15
CASC4-206ENST00000558847 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
CASC4-206ENST00000558847 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
CASC4-206ENST00000558847 ANKMY2Q8IV38 441 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms