RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
SCG3-203ENST00000558709 GJD4Q96KN9 370 aaPredicted RBP11.87□□□□□ -0.51
SCG3-203ENST00000558709 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
SCG3-203ENST00000558709 ROBO2Q9HCK4 1378 aa11.87□□□□□ -0.51
SCG3-203ENST00000558709 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
SCG3-203ENST00000558709 HRCP23327 699 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 CLK2P49760 499 aaKnown RBP11.86□□□□□ -0.51
SCG3-203ENST00000558709 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 NUP155O75694 1391 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 SLIT2O94813 1529 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
SCG3-203ENST00000558709 LILRB3O75022 631 aa11.85□□□□□ -0.51
SCG3-203ENST00000558709 RPIAP49247 311 aa11.85□□□□□ -0.51
SCG3-203ENST00000558709 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
SCG3-203ENST00000558709 DESI1Q6ICB0 168 aa11.85□□□□□ -0.51
SCG3-203ENST00000558709 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
SCG3-203ENST00000558709 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
SCG3-203ENST00000558709 TNS1Q9HBL0 1735 aaKnown RBP11.85□□□□□ -0.51
SCG3-203ENST00000558709 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
SCG3-203ENST00000558709 KNDC1Q76NI1 1749 aa11.84□□□□□ -0.51
SCG3-203ENST00000558709 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
SCG3-203ENST00000558709 QPCTQ16769 361 aa11.84□□□□□ -0.51
SCG3-203ENST00000558709 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
SCG3-203ENST00000558709 CFAP99D6REC4 459 aa11.83□□□□□ -0.52
SCG3-203ENST00000558709 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
SCG3-203ENST00000558709 XPCQ01831 940 aaPredicted RBP11.82□□□□□ -0.52
SCG3-203ENST00000558709 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
SCG3-203ENST00000558709 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
SCG3-203ENST00000558709 ZNF598Q86UK7 904 aaKnown RBP11.82□□□□□ -0.52
SCG3-203ENST00000558709 HFM1A2PYH4 1435 aa11.82□□□□□ -0.52
SCG3-203ENST00000558709 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
SCG3-203ENST00000558709 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
SCG3-203ENST00000558709 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
SCG3-203ENST00000558709 PTPRNQ16849 979 aa11.8□□□□□ -0.52
SCG3-203ENST00000558709 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
SCG3-203ENST00000558709 UNC5CLQ8IV45 518 aa11.8□□□□□ -0.52
SCG3-203ENST00000558709 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCG3-203ENST00000558709 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
SCG3-203ENST00000558709 FOXO3O43524 673 aa11.78□□□□□ -0.52
SCG3-203ENST00000558709 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
SCG3-203ENST00000558709 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
SCG3-203ENST00000558709 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
SCG3-203ENST00000558709 NAIPQ13075 1403 aa11.77□□□□□ -0.52
SCG3-203ENST00000558709 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
SCG3-203ENST00000558709 LYPD8Q6UX82 237 aa11.77□□□□□ -0.53
SCG3-203ENST00000558709 PROCA1Q8NCQ7 364 aaPredicted RBP11.77□□□□□ -0.53
SCG3-203ENST00000558709 GOPCQ9HD26 462 aa11.77□□□□□ -0.53
SCG3-203ENST00000558709 RREB1Q92766 1687 aa11.76□□□□□ -0.53
SCG3-203ENST00000558709 CCNYL3P0C7X3 344 aa11.76□□□□□ -0.53
SCG3-203ENST00000558709 LRPPRCP42704 1394 aaKnown RBP11.76□□□□□ -0.53
SCG3-203ENST00000558709 NUP188Q5SRE5 1749 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 CRYBG1Q9Y4K1 1723 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 GDF9O60383 454 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 PRR20EP86478 221 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 PRR20CP86479 221 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 PRR20DP86480 221 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 PRR20BP86481 221 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 PRR20AP86496 221 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 TRIM32Q13049 653 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 PTCRAQ6ISU1 281 aaPredicted RBP11.75□□□□□ -0.53
SCG3-203ENST00000558709 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 THSD7AQ9UPZ6 1657 aa11.75□□□□□ -0.53
SCG3-203ENST00000558709 BAG6P46379 1132 aa11.74□□□□□ -0.53
SCG3-203ENST00000558709 VPS72Q15906 364 aa11.74□□□□□ -0.53
SCG3-203ENST00000558709 PPP2R2DQ66LE6 453 aa11.74□□□□□ -0.53
SCG3-203ENST00000558709 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
SCG3-203ENST00000558709 PKD2L1Q9P0L9 805 aa11.74□□□□□ -0.53
SCG3-203ENST00000558709 SPATA31A3Q5VYP0 1347 aa11.74□□□□□ -0.53
SCG3-203ENST00000558709 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
SCG3-203ENST00000558709 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
SCG3-203ENST00000558709 ADGRB2O60241 1585 aa11.73□□□□□ -0.53
SCG3-203ENST00000558709 ITGAEP38570 1179 aa11.73□□□□□ -0.53
SCG3-203ENST00000558709 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
SCG3-203ENST00000558709 CCDC24Q8N4L8 307 aa11.73□□□□□ -0.53
SCG3-203ENST00000558709 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
SCG3-203ENST00000558709 ALS2Q96Q42 1657 aa11.73□□□□□ -0.53
SCG3-203ENST00000558709 TECPR2O15040 1411 aa11.72□□□□□ -0.53
SCG3-203ENST00000558709 CD2BP2O95400 341 aaKnown RBP11.72□□□□□ -0.53
SCG3-203ENST00000558709 F12P00748 615 aaPredicted RBP11.72□□□□□ -0.53
SCG3-203ENST00000558709 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
SCG3-203ENST00000558709 CCDC9Q9Y3X0 531 aaKnown RBP11.72□□□□□ -0.53
SCG3-203ENST00000558709 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.53
SCG3-203ENST00000558709 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
SCG3-203ENST00000558709 ZBTB24O43167 697 aaPredicted RBP11.71□□□□□ -0.53
SCG3-203ENST00000558709 GFRA3O60609 400 aa11.71□□□□□ -0.53
SCG3-203ENST00000558709 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
SCG3-203ENST00000558709 CAMTA1Q9Y6Y1 1673 aa11.71□□□□□ -0.54
SCG3-203ENST00000558709 MYT1Q01538 1121 aa11.7□□□□□ -0.54
SCG3-203ENST00000558709 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
SCG3-203ENST00000558709 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
SCG3-203ENST00000558709 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
SCG3-203ENST00000558709 PLEKHH1Q9ULM0 1364 aa11.69□□□□□ -0.54
SCG3-203ENST00000558709 CHD4Q14839 1912 aa11.69□□□□□ -0.54
SCG3-203ENST00000558709 SKOR1P84550 965 aa11.68□□□□□ -0.54
SCG3-203ENST00000558709 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms