RNA–Protein interactions for RNA: ENST00000558604.1

ACAN-204, Transcript of aggrecan, humanhuman

TSL 2

Gene ACAN, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-204ENST00000558604 BTBD11A6QL63 1104 aa19.73■□□□□ 0.75
ACAN-204ENST00000558604 CANXP27824 592 aaKnown RBP19.73■□□□□ 0.75
ACAN-204ENST00000558604 FKBP8Q14318 412 aa19.73■□□□□ 0.75
ACAN-204ENST00000558604 USPL1Q5W0Q7 1092 aa19.73■□□□□ 0.75
ACAN-204ENST00000558604 ZNF496Q96IT1 587 aaPredicted RBP19.73■□□□□ 0.75
ACAN-204ENST00000558604 MCM10Q7L590 875 aa19.72■□□□□ 0.75
ACAN-204ENST00000558604 FMNL2Q96PY5 1086 aa19.72■□□□□ 0.75
ACAN-204ENST00000558604 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
ACAN-204ENST00000558604 TGFB2P61812 414 aa19.71■□□□□ 0.75
ACAN-204ENST00000558604 NPM2Q86SE8 214 aaKnown RBP19.71■□□□□ 0.75
ACAN-204ENST00000558604 TEX13AQ9BXU3 409 aaPredicted RBP19.71■□□□□ 0.75
ACAN-204ENST00000558604 MAPK8IP3Q9UPT6 1336 aa19.7■□□□□ 0.74
ACAN-204ENST00000558604 SCN7AQ01118 1682 aa19.69■□□□□ 0.74
ACAN-204ENST00000558604 DLG5Q8TDM6 1919 aa19.69■□□□□ 0.74
ACAN-204ENST00000558604 DDR1Q08345 913 aa19.69■□□□□ 0.74
ACAN-204ENST00000558604 DDX10Q13206 875 aaKnown RBP19.69■□□□□ 0.74
ACAN-204ENST00000558604 RALBP1Q15311 655 aa19.69■□□□□ 0.74
ACAN-204ENST00000558604 NARFQ9UHQ1 456 aa19.69■□□□□ 0.74
ACAN-204ENST00000558604 A0A087WZG4 1122 aa19.68■□□□□ 0.74
ACAN-204ENST00000558604 A0A0G2JLW4 131 aa19.68■□□□□ 0.74
ACAN-204ENST00000558604 BCS1LQ9Y276 419 aa19.68■□□□□ 0.74
ACAN-204ENST00000558604 GOLGB1Q14789 3259 aaKnown RBP19.68■□□□□ 0.74
ACAN-204ENST00000558604 HTATSF1O43719 755 aaKnown RBP19.67■□□□□ 0.74
ACAN-204ENST00000558604 DCTN1Q14203 1278 aa19.67■□□□□ 0.74
ACAN-204ENST00000558604 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
ACAN-204ENST00000558604 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
ACAN-204ENST00000558604 POLRMTO00411 1230 aaKnown RBP19.66■□□□□ 0.74
ACAN-204ENST00000558604 KCNQ3O43525 872 aa19.66■□□□□ 0.74
ACAN-204ENST00000558604 DPEP1P16444 411 aa19.66■□□□□ 0.74
ACAN-204ENST00000558604 AFDNP55196 1824 aaKnown RBP19.66■□□□□ 0.74
ACAN-204ENST00000558604 ATP10DQ9P241 1426 aa19.65■□□□□ 0.74
ACAN-204ENST00000558604 NFIXQ14938 502 aa19.64■□□□□ 0.73
ACAN-204ENST00000558604 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
ACAN-204ENST00000558604 GIGYF1O75420 1035 aaPredicted RBP19.63■□□□□ 0.73
ACAN-204ENST00000558604 TM4SF1P30408 202 aa19.63■□□□□ 0.73
ACAN-204ENST00000558604 EIF5P55010 431 aaKnown RBP19.63■□□□□ 0.73
ACAN-204ENST00000558604 BICDL1Q6ZP65 573 aa19.63■□□□□ 0.73
ACAN-204ENST00000558604 BCORQ6W2J9 1755 aa19.62■□□□□ 0.73
ACAN-204ENST00000558604 NRXN2Q9P2S2 1712 aa19.62■□□□□ 0.73
ACAN-204ENST00000558604 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
ACAN-204ENST00000558604 SNRPA1P09661 255 aaKnown RBP19.62■□□□□ 0.73
ACAN-204ENST00000558604 IL6STP40189 918 aaPredicted RBP19.62■□□□□ 0.73
ACAN-204ENST00000558604 ARFGEF1Q9Y6D6 1849 aa19.62■□□□□ 0.73
ACAN-204ENST00000558604 A1BGP04217 495 aa19.61■□□□□ 0.73
ACAN-204ENST00000558604 TAF7Q15545 349 aaPredicted RBP19.61■□□□□ 0.73
ACAN-204ENST00000558604 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
ACAN-204ENST00000558604 BCL2L12Q9HB09 334 aa19.61■□□□□ 0.73
ACAN-204ENST00000558604 PIM2Q9P1W9 311 aa19.61■□□□□ 0.73
ACAN-204ENST00000558604 TBC1D2BQ9UPU7 963 aa19.61■□□□□ 0.73
ACAN-204ENST00000558604 KDM3BQ7LBC6 1761 aa19.61■□□□□ 0.73
ACAN-204ENST00000558604 SERPINB2P05120 415 aa19.6■□□□□ 0.73
ACAN-204ENST00000558604 CHRNA5P30532 468 aa19.6■□□□□ 0.73
ACAN-204ENST00000558604 PLEKHF1Q96S99 279 aa19.6■□□□□ 0.73
ACAN-204ENST00000558604 ADCY9O60503 1353 aa19.59■□□□□ 0.73
ACAN-204ENST00000558604 NPHP1O15259 732 aa19.59■□□□□ 0.73
ACAN-204ENST00000558604 DALRD3Q5D0E6 543 aaKnown RBP19.59■□□□□ 0.73
ACAN-204ENST00000558604 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
ACAN-204ENST00000558604 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
ACAN-204ENST00000558604 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
ACAN-204ENST00000558604 CARMIL3Q8ND23 1372 aa19.58■□□□□ 0.73
ACAN-204ENST00000558604 DLEC1Q9Y238 1755 aa19.58■□□□□ 0.73
ACAN-204ENST00000558604 PRAMEF22A3QJZ6 481 aa19.58■□□□□ 0.72
ACAN-204ENST00000558604 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.72
ACAN-204ENST00000558604 DZIP3Q86Y13 1208 aaKnown RBP19.58■□□□□ 0.72
ACAN-204ENST00000558604 GPBP1L1Q9HC44 474 aaPredicted RBP19.58■□□□□ 0.72
ACAN-204ENST00000558604 MIS18AQ9NYP9 233 aa19.58■□□□□ 0.72
ACAN-204ENST00000558604 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
ACAN-204ENST00000558604 TBC1D9BQ66K14 1250 aa19.57■□□□□ 0.72
ACAN-204ENST00000558604 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
ACAN-204ENST00000558604 KCNA3P22001 575 aa19.56■□□□□ 0.72
ACAN-204ENST00000558604 WDR43Q15061 677 aaKnown RBP eCLIP19.56■□□□□ 0.72
ACAN-204ENST00000558604 C1QTNF8P60827 252 aa19.55■□□□□ 0.72
ACAN-204ENST00000558604 ZNF652Q9Y2D9 606 aa19.55■□□□□ 0.72
ACAN-204ENST00000558604 CAMTA2O94983 1202 aa19.54■□□□□ 0.72
ACAN-204ENST00000558604 LMOD3Q0VAK6 560 aa19.54■□□□□ 0.72
ACAN-204ENST00000558604 SETDB2Q96T68 719 aa19.54■□□□□ 0.72
ACAN-204ENST00000558604 RIPK4P57078 832 aa19.53■□□□□ 0.72
ACAN-204ENST00000558604 C2CD5Q86YS7 1000 aa19.53■□□□□ 0.72
ACAN-204ENST00000558604 CNBD1Q8NA66 436 aa19.53■□□□□ 0.72
ACAN-204ENST00000558604 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.72
ACAN-204ENST00000558604 CCDC146Q8IYE0 955 aa19.52■□□□□ 0.72
ACAN-204ENST00000558604 COL11A2P13942 1736 aaPredicted RBP19.51■□□□□ 0.71
ACAN-204ENST00000558604 H0YIN7 160 aa19.51■□□□□ 0.71
ACAN-204ENST00000558604 ST5P78524 1137 aa19.51■□□□□ 0.71
ACAN-204ENST00000558604 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
ACAN-204ENST00000558604 SENP3-EIF4A1A0A087X0R7 540 aa19.5■□□□□ 0.71
ACAN-204ENST00000558604 PDE6BP35913 854 aa19.5■□□□□ 0.71
ACAN-204ENST00000558604 PRR5LQ6MZQ0 368 aa19.5■□□□□ 0.71
ACAN-204ENST00000558604 NBPF26B4DH59 902 aa19.49■□□□□ 0.71
ACAN-204ENST00000558604 ZEB1P37275 1124 aaPredicted RBP19.49■□□□□ 0.71
ACAN-204ENST00000558604 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
ACAN-204ENST00000558604 NBPF10Q6P3W6 841 aaKnown RBP19.49■□□□□ 0.71
ACAN-204ENST00000558604 CCDC24Q8N4L8 307 aa19.49■□□□□ 0.71
ACAN-204ENST00000558604 NBPF15Q8N660 670 aa19.49■□□□□ 0.71
ACAN-204ENST00000558604 TTLL6Q8N841 843 aa19.49■□□□□ 0.71
ACAN-204ENST00000558604 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
ACAN-204ENST00000558604 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
ACAN-204ENST00000558604 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
ACAN-204ENST00000558604 C9orf131Q5VYM1 1079 aa19.48■□□□□ 0.71
ACAN-204ENST00000558604 CLEC4GQ6UXB4 293 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms