RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GNAI3P08754 354 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ALDH3A1P30838 453 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ZNF445P59923 1031 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 CFAP58Q5T655 872 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 FSIP1Q8NA03 581 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 EID1Q9Y6B2 187 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ERICH2A1L162 156 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 VGFO15240 615 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SMIM24O75264 130 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 CSB-PGBD3P0DP91 1061 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 LIG3P49916 1009 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SART3Q15020 963 aaKnown RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 NBPF11Q86T75 865 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SSBP05455 408 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 FKBP5Q13451 457 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 TTC19Q6DKK2 380 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 AACSQ86V21 672 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 PARD6BQ9BYG5 372 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 JADE2Q9NQC1 790 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ATF7IPQ6VMQ6 1270 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 PIBF1Q8WXW3 757 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 CHMP7Q8WUX9 453 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 FSD1Q9BTV5 496 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 VIMP08670 466 aaKnown RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SRCIN1Q9C0H9 1055 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 GOPCQ9HD26 462 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 BRD2P25440 801 aaKnown RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 AEBP2Q6ZN18 517 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC77Q9BR77 488 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 MXRA7P84157 204 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 RIC3Q7Z5B4 369 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 HLTFQ14527 1009 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 KIAA0753Q2KHM9 967 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ZSCAN22P10073 491 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 ICE2Q659A1 982 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SEPT14Q6ZU15 432 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SPG7Q9UQ90 795 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 KIF7Q2M1P5 1343 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 BLOC1S2Q6QNY1 142 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 CTCFLQ8NI51 663 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 NUP88Q99567 741 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SUDS3Q9H7L9 328 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 USH1CQ9Y6N9 552 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 SDSP20132 328 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 LARP1Q6PKG0 1096 aaKnown RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 GDAP1L1Q96MZ0 367 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 RBBP5Q15291 538 aaKnown RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 TMCO4Q5TGY1 634 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 PFDN1O60925 122 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 GUCY1B3Q02153 619 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 TMX4Q9H1E5 349 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 DACH1Q9UI36 760 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 TAF7Q15545 349 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-248ENST00000558190 PPP1R12CQ9BZL4 782 aa4.26□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC160A6NGH7 325 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CASTP20810 708 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 DNM1Q05193 864 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CEP112Q8N8E3 955 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 SIL1Q9H173 461 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 RAD21O60216 631 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 KRT18P05783 430 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 BIRC2Q13490 618 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 MSL1Q68DK7 614 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 DDX27Q96GQ7 796 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 RRAGBQ5VZM2 374 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 TEX11Q8IYF3 940 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 HIP1O00291 1037 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 GOLGA6L9A6NEM1 432 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 EHBP1Q8NDI1 1231 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 LUC7LQ9NQ29 371 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 NUTM2FA1L443 756 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 ARMC2Q8NEN0 867 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 HYPKQ9NX55 129 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC38Q502W7 563 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 SPECC1LQ69YQ0 1117 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 DACT1Q9NYF0 836 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC30Q5VVM6 783 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 RAB3IL1Q8TBN0 382 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 GYS2P54840 703 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CAPZA3Q96KX2 299 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 ATP8B2P98198 1209 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.25□□□□□ -1.734e-8■■□□□ 11.9
ATXN3-248ENST00000558190 ARMC9Q7Z3E5 817 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 TYRO3Q06418 890 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 ALS2CR12Q96Q35 445 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 ZFYP08048 801 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 ZGPATQ8N5A5 531 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 G3V3G9 751 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 ANO6Q4KMQ2 910 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 DCAF8Q5TAQ9 597 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 GGT6Q6P531 493 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 IRAK4Q9NWZ3 460 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 PDE11AQ9HCR9 933 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 SEPT11Q9NVA2 429 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 SYCP1Q15431 976 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 RNF10Q8N5U6 811 aaKnown RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 MRVI1Q9Y6F6 885 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC178Q5BJE1 867 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 MTX1Q13505 466 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms