RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
SNRPA1-205ENST00000558036 ASAP1Q9ULH1 1129 aa25.77■■□□□ 1.72
SNRPA1-205ENST00000558036 GLI3P10071 1580 aa25.77■■□□□ 1.72
SNRPA1-205ENST00000558036 MYL6BP14649 208 aa25.76■■□□□ 1.71
SNRPA1-205ENST00000558036 MARCH10Q8NA82 808 aaPredicted RBP25.76■■□□□ 1.71
SNRPA1-205ENST00000558036 MEIS3Q99687 375 aa25.76■■□□□ 1.71
SNRPA1-205ENST00000558036 RWDD1Q9H446 243 aaPredicted RBP25.76■■□□□ 1.71
SNRPA1-205ENST00000558036 PI4KAP2A4QPH2 592 aa25.75■■□□□ 1.71
SNRPA1-205ENST00000558036 CCT4P50991 539 aaKnown RBP25.75■■□□□ 1.71
SNRPA1-205ENST00000558036 PI4KAP1Q8N8J0 262 aa25.75■■□□□ 1.71
SNRPA1-205ENST00000558036 CHMP4BQ9H444 224 aaKnown RBP25.75■■□□□ 1.71
SNRPA1-205ENST00000558036 DDX21Q9NR30 783 aaKnown RBP eCLIP25.75■■□□□ 1.71
SNRPA1-205ENST00000558036 KCPQ6ZWJ8 1503 aa25.75■■□□□ 1.71
SNRPA1-205ENST00000558036 A0A0G2JS52 829 aa25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 PRIM1P49642 420 aaKnown RBP25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 AIMP1Q12904 312 aaKnown RBP25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 HYPKQ9NX55 129 aa25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 PAPPAQ13219 1627 aa25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 MYT1Q01538 1121 aa25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 CACNA1FO60840 1977 aa25.73■■□□□ 1.71
SNRPA1-205ENST00000558036 ACSBG1Q96GR2 724 aa25.72■■□□□ 1.71
SNRPA1-205ENST00000558036 ATG3Q9NT62 314 aa25.72■■□□□ 1.71
SNRPA1-205ENST00000558036 AFF2P51816 1311 aa25.72■■□□□ 1.71
SNRPA1-205ENST00000558036 ADCY9O60503 1353 aa25.72■■□□□ 1.71
SNRPA1-205ENST00000558036 BCL9O00512 1426 aa25.71■■□□□ 1.71
SNRPA1-205ENST00000558036 HDAC1Q13547 482 aaPredicted RBP25.71■■□□□ 1.71
SNRPA1-205ENST00000558036 UBR2Q8IWV8 1755 aa25.71■■□□□ 1.71
SNRPA1-205ENST00000558036 TSHZ2Q9NRE2 1034 aa25.7■■□□□ 1.71
SNRPA1-205ENST00000558036 SIRT2Q8IXJ6 389 aa25.7■■□□□ 1.7
SNRPA1-205ENST00000558036 DNAAF4Q8WXU2 420 aa25.7■■□□□ 1.7
SNRPA1-205ENST00000558036 MAP3K2Q9Y2U5 619 aa25.69■■□□□ 1.7
SNRPA1-205ENST00000558036 ITGB4P16144 1822 aa25.69■■□□□ 1.7
SNRPA1-205ENST00000558036 RBM42Q9BTD8 480 aaKnown RBP25.68■■□□□ 1.7
SNRPA1-205ENST00000558036 LRP10Q7Z4F1 713 aa25.67■■□□□ 1.7
SNRPA1-205ENST00000558036 XAGE3Q8WTP9 111 aa25.67■■□□□ 1.7
SNRPA1-205ENST00000558036 DOT1LQ8TEK3 1739 aa25.67■■□□□ 1.7
SNRPA1-205ENST00000558036 RGS3P49796 1198 aa25.67■■□□□ 1.7
SNRPA1-205ENST00000558036 COPS6Q7L5N1 327 aa25.67■■□□□ 1.7
SNRPA1-205ENST00000558036 PXDNLA1KZ92 1463 aa25.67■■□□□ 1.7
SNRPA1-205ENST00000558036 KAT6BQ8WYB5 2073 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 NBPF26B4DH59 902 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 A1BGP04217 495 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 BEND3Q5T5X7 828 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 NBPF14Q5TI25 921 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 NBPF10Q6P3W6 841 aaKnown RBP25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 KSR2Q6VAB6 950 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 NBPF15Q8N660 670 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 SRCIN1Q9C0H9 1055 aa25.66■■□□□ 1.7
SNRPA1-205ENST00000558036 GJD4Q96KN9 370 aaPredicted RBP25.64■■□□□ 1.7
SNRPA1-205ENST00000558036 ATP10DQ9P241 1426 aa25.64■■□□□ 1.7
SNRPA1-205ENST00000558036 USP44Q9H0E7 712 aa25.64■■□□□ 1.69
SNRPA1-205ENST00000558036 PDZRN3Q9UPQ7 1066 aa25.64■■□□□ 1.69
SNRPA1-205ENST00000558036 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.64■■□□□ 1.69
SNRPA1-205ENST00000558036 DNAJC10Q8IXB1 793 aa25.63■■□□□ 1.69
SNRPA1-205ENST00000558036 LAMB4A4D0S4 1761 aa25.63■■□□□ 1.69
SNRPA1-205ENST00000558036 DDX58O95786 925 aaKnown RBP25.63■■□□□ 1.69
SNRPA1-205ENST00000558036 SLC4A9Q96Q91 983 aa25.63■■□□□ 1.69
SNRPA1-205ENST00000558036 KCNQ2O43526 872 aa25.62■■□□□ 1.69
SNRPA1-205ENST00000558036 CEP85Q6P2H3 762 aa25.62■■□□□ 1.69
SNRPA1-205ENST00000558036 RIC3Q7Z5B4 369 aa25.61■■□□□ 1.69
SNRPA1-205ENST00000558036 CWF19L2Q2TBE0 894 aaKnown RBP25.61■■□□□ 1.69
SNRPA1-205ENST00000558036 FAM182BQ5T319 152 aa25.61■■□□□ 1.69
SNRPA1-205ENST00000558036 SMC5Q8IY18 1101 aa25.61■■□□□ 1.69
SNRPA1-205ENST00000558036 GNAI2P04899 355 aa25.6■■□□□ 1.69
SNRPA1-205ENST00000558036 ANKRD44Q8N8A2 993 aa25.6■■□□□ 1.69
SNRPA1-205ENST00000558036 GNAI3P08754 354 aa25.59■■□□□ 1.69
SNRPA1-205ENST00000558036 NBPF7P0C2Y1 421 aaPredicted RBP25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 ANKRD13DQ6ZTN6 518 aa25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 VSIG10Q8N0Z9 540 aa25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 TRPC5Q9UL62 973 aaPredicted RBP25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 N4BP2Q86UW6 1770 aaPredicted RBP25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 LRRFIP2Q9Y608 721 aaKnown RBP25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 ERBB4Q15303 1308 aa25.58■■□□□ 1.69
SNRPA1-205ENST00000558036 ATRNO75882 1429 aa25.58■■□□□ 1.68
SNRPA1-205ENST00000558036 UBTFL1P0CB47 393 aaPredicted RBP25.57■■□□□ 1.68
SNRPA1-205ENST00000558036 RPAP2Q8IXW5 612 aaPredicted RBP25.57■■□□□ 1.68
SNRPA1-205ENST00000558036 THSD7AQ9UPZ6 1657 aa25.56■■□□□ 1.68
SNRPA1-205ENST00000558036 TTLL7Q6ZT98 887 aa25.56■■□□□ 1.68
SNRPA1-205ENST00000558036 QTRT2Q9H974 415 aaKnown RBP25.56■■□□□ 1.68
SNRPA1-205ENST00000558036 ZNF330Q9Y3S2 320 aaPredicted RBP25.56■■□□□ 1.68
SNRPA1-205ENST00000558036 IGKV5-2P06315 115 aa25.55■■□□□ 1.68
SNRPA1-205ENST00000558036 PTF1AQ7RTS3 328 aa25.55■■□□□ 1.68
SNRPA1-205ENST00000558036 EP400Q96L91 3159 aa25.54■■□□□ 1.68
SNRPA1-205ENST00000558036 STARD3NLO95772 234 aa25.54■■□□□ 1.68
SNRPA1-205ENST00000558036 LINS1Q8NG48 757 aa25.54■■□□□ 1.68
SNRPA1-205ENST00000558036 MYD88Q99836 296 aa25.54■■□□□ 1.68
SNRPA1-205ENST00000558036 TEX13AQ9BXU3 409 aaPredicted RBP25.54■■□□□ 1.68
SNRPA1-205ENST00000558036 METTL22Q9BUU2 404 aaPredicted RBP25.53■■□□□ 1.68
SNRPA1-205ENST00000558036 ALDH1L1O75891 902 aa25.52■■□□□ 1.68
SNRPA1-205ENST00000558036 GCC1Q96CN9 775 aa25.52■■□□□ 1.68
SNRPA1-205ENST00000558036 CYP19A1P11511 503 aaPredicted RBP25.52■■□□□ 1.68
SNRPA1-205ENST00000558036 SEPT12Q8IYM1 358 aa25.52■■□□□ 1.68
SNRPA1-205ENST00000558036 C9orf78Q9NZ63 289 aaPredicted RBP25.52■■□□□ 1.68
SNRPA1-205ENST00000558036 PNMA6EA0A0J9YXQ4 647 aa25.51■■□□□ 1.67
SNRPA1-205ENST00000558036 NUCB1Q02818 461 aa25.51■■□□□ 1.67
SNRPA1-205ENST00000558036 NEXNQ0ZGT2 675 aa25.51■■□□□ 1.67
SNRPA1-205ENST00000558036 ANKRD45Q5TZF3 282 aa25.51■■□□□ 1.67
SNRPA1-205ENST00000558036 LNPKQ9C0E8 428 aa25.51■■□□□ 1.67
SNRPA1-205ENST00000558036 PLBD2Q8NHP8 589 aa25.51■■□□□ 1.67
SNRPA1-205ENST00000558036 ZBTB3Q9H5J0 574 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms