RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
APEX1-220ENST00000557592 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
APEX1-220ENST00000557592 FANCIQ9NVI1 1328 aa14.72□□□□□ -0.05
APEX1-220ENST00000557592 UBR3Q6ZT12 1888 aa14.72□□□□□ -0.05
APEX1-220ENST00000557592 PSDA5PKW4 1024 aaPredicted RBP14.72□□□□□ -0.05
APEX1-220ENST00000557592 GNPATO15228 680 aa14.72□□□□□ -0.05
APEX1-220ENST00000557592 RC3H1Q5TC82 1133 aaKnown RBP14.72□□□□□ -0.05
APEX1-220ENST00000557592 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
APEX1-220ENST00000557592 USP16Q9Y5T5 823 aa14.72□□□□□ -0.05
APEX1-220ENST00000557592 INTS5Q6P9B9 1019 aaKnown RBP14.71□□□□□ -0.05
APEX1-220ENST00000557592 QSER1Q2KHR3 1735 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 E9PSI1 815 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 ELL2O00472 640 aaPredicted RBP14.7□□□□□ -0.06
APEX1-220ENST00000557592 PHF14O94880 888 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 DUSP27Q5VZP5 1158 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 SMIM5Q71RC9 77 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 CDCA7LQ96GN5 454 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
APEX1-220ENST00000557592 RTCBQ9Y3I0 505 aaKnown RBP14.7□□□□□ -0.06
APEX1-220ENST00000557592 A1BGP04217 495 aa14.69□□□□□ -0.06
APEX1-220ENST00000557592 EIF2S2P20042 333 aaKnown RBP14.69□□□□□ -0.06
APEX1-220ENST00000557592 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
APEX1-220ENST00000557592 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
APEX1-220ENST00000557592 C8orf58Q8NAV2 365 aa14.69□□□□□ -0.06
APEX1-220ENST00000557592 ZBED9Q6R2W3 1325 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 PNPLA7Q6ZV29 1317 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 MSH5O43196 834 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 SSFA2P28290 1259 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 PIP4K2AP48426 406 aaPredicted RBP14.68□□□□□ -0.06
APEX1-220ENST00000557592 SLFN5Q08AF3 891 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 NECTIN2Q92692 538 aa14.68□□□□□ -0.06
APEX1-220ENST00000557592 ZNF330Q9Y3S2 320 aaPredicted RBP14.68□□□□□ -0.06
APEX1-220ENST00000557592 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.67□□□□□ -0.06
APEX1-220ENST00000557592 HOXB7P09629 217 aa14.67□□□□□ -0.06
APEX1-220ENST00000557592 EXOSC9Q06265 439 aaKnown RBP14.67□□□□□ -0.06
APEX1-220ENST00000557592 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
APEX1-220ENST00000557592 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
APEX1-220ENST00000557592 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
APEX1-220ENST00000557592 YTHDC1Q96MU7 727 aaKnown RBP14.67□□□□□ -0.06
APEX1-220ENST00000557592 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
APEX1-220ENST00000557592 TWISTNBQ3B726 338 aaPredicted RBP14.66□□□□□ -0.06
APEX1-220ENST00000557592 TRAPPC3LQ5T215 181 aa14.66□□□□□ -0.06
APEX1-220ENST00000557592 COL23A1Q86Y22 540 aaPredicted RBP14.66□□□□□ -0.06
APEX1-220ENST00000557592 PDGFDQ9GZP0 370 aaPredicted RBP14.66□□□□□ -0.06
APEX1-220ENST00000557592 CASZ1Q86V15 1759 aa14.65□□□□□ -0.06
APEX1-220ENST00000557592 COL15A1P39059 1388 aa14.65□□□□□ -0.06
APEX1-220ENST00000557592 NBPF26B4DH59 902 aa14.65□□□□□ -0.06
APEX1-220ENST00000557592 ADRA2BP18089 450 aa14.65□□□□□ -0.06
APEX1-220ENST00000557592 NBPF10Q6P3W6 841 aaKnown RBP14.65□□□□□ -0.06
APEX1-220ENST00000557592 NPM2Q86SE8 214 aaKnown RBP14.65□□□□□ -0.06
APEX1-220ENST00000557592 NBPF15Q8N660 670 aa14.65□□□□□ -0.06
APEX1-220ENST00000557592 ARHGEF1Q92888 912 aaKnown RBP14.65□□□□□ -0.06
APEX1-220ENST00000557592 C4AP0C0L4 1744 aa14.64□□□□□ -0.07
APEX1-220ENST00000557592 MYL6BP14649 208 aa14.64□□□□□ -0.07
APEX1-220ENST00000557592 IL6STP40189 918 aaPredicted RBP14.64□□□□□ -0.07
APEX1-220ENST00000557592 EIF5P55010 431 aaKnown RBP14.64□□□□□ -0.07
APEX1-220ENST00000557592 ARXQ96QS3 562 aa14.64□□□□□ -0.07
APEX1-220ENST00000557592 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
APEX1-220ENST00000557592 RFC4P35249 363 aa14.63□□□□□ -0.07
APEX1-220ENST00000557592 TRMT2AQ8IZ69 625 aaKnown RBP14.63□□□□□ -0.07
APEX1-220ENST00000557592 CHMP4AQ9BY43 222 aa14.63□□□□□ -0.07
APEX1-220ENST00000557592 CHPF2Q9P2E5 772 aa14.63□□□□□ -0.07
APEX1-220ENST00000557592 A0A087WZG4 1122 aa14.62□□□□□ -0.07
APEX1-220ENST00000557592 ANXA1P04083 346 aa14.62□□□□□ -0.07
APEX1-220ENST00000557592 PDIA6Q15084 440 aa14.62□□□□□ -0.07
APEX1-220ENST00000557592 PROSER3Q2NL68 480 aa14.62□□□□□ -0.07
APEX1-220ENST00000557592 CCDC30Q5VVM6 783 aa14.62□□□□□ -0.07
APEX1-220ENST00000557592 DBF4Q9UBU7 674 aaPredicted RBP14.62□□□□□ -0.07
APEX1-220ENST00000557592 TCERG1O14776 1098 aaKnown RBP14.61□□□□□ -0.07
APEX1-220ENST00000557592 ZPR1O75312 459 aa14.61□□□□□ -0.07
APEX1-220ENST00000557592 VAMP4O75379 141 aa14.61□□□□□ -0.07
APEX1-220ENST00000557592 ZBTB7AO95365 584 aa14.61□□□□□ -0.07
APEX1-220ENST00000557592 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
APEX1-220ENST00000557592 SRP68Q9UHB9 627 aaKnown RBP14.61□□□□□ -0.07
APEX1-220ENST00000557592 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
APEX1-220ENST00000557592 DZIP3Q86Y13 1208 aaKnown RBP14.6□□□□□ -0.07
APEX1-220ENST00000557592 SLC16A10Q8TF71 515 aa14.6□□□□□ -0.07
APEX1-220ENST00000557592 STK31Q9BXU1 1019 aa14.6□□□□□ -0.07
APEX1-220ENST00000557592 USP42Q9H9J4 1324 aaKnown RBP14.6□□□□□ -0.07
APEX1-220ENST00000557592 USPL1Q5W0Q7 1092 aa14.59□□□□□ -0.07
APEX1-220ENST00000557592 MSL1Q68DK7 614 aa14.59□□□□□ -0.07
APEX1-220ENST00000557592 HYPKQ9NX55 129 aa14.59□□□□□ -0.07
APEX1-220ENST00000557592 NARFQ9UHQ1 456 aa14.59□□□□□ -0.07
APEX1-220ENST00000557592 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
APEX1-220ENST00000557592 SCN7AQ01118 1682 aa14.58□□□□□ -0.07
APEX1-220ENST00000557592 GYS1P13807 737 aa14.58□□□□□ -0.08
APEX1-220ENST00000557592 AIMP1Q12904 312 aaKnown RBP14.58□□□□□ -0.08
APEX1-220ENST00000557592 KIF6Q6ZMV9 814 aa14.58□□□□□ -0.08
APEX1-220ENST00000557592 TTLL7Q6ZT98 887 aa14.58□□□□□ -0.08
APEX1-220ENST00000557592 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.08
APEX1-220ENST00000557592 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.08
APEX1-220ENST00000557592 MTFR1LQ9H019 292 aa14.58□□□□□ -0.08
APEX1-220ENST00000557592 BCORQ6W2J9 1755 aa14.57□□□□□ -0.08
APEX1-220ENST00000557592 CACNA1FO60840 1977 aa14.57□□□□□ -0.08
APEX1-220ENST00000557592 CAMTA2O94983 1202 aa14.57□□□□□ -0.08
APEX1-220ENST00000557592 COPS6Q7L5N1 327 aa14.57□□□□□ -0.08
APEX1-220ENST00000557592 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
APEX1-220ENST00000557592 ZBTB3Q9H5J0 574 aa14.56□□□□□ -0.08
APEX1-220ENST00000557592 PHAXQ9H814 394 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms