RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
ABCD4-227ENST00000557554 TNRC18O15417 2968 aaPredicted RBP14.13□□□□□ -0.15
ABCD4-227ENST00000557554 EMILIN1Q9Y6C2 1016 aa14.13□□□□□ -0.15
ABCD4-227ENST00000557554 DLEC1Q9Y238 1755 aa14.13□□□□□ -0.15
ABCD4-227ENST00000557554 AFDNP55196 1824 aaKnown RBP14.13□□□□□ -0.15
ABCD4-227ENST00000557554 CCDC85CA6NKD9 419 aa14.12□□□□□ -0.15
ABCD4-227ENST00000557554 TMEM88BA6NKF7 163 aa14.12□□□□□ -0.15
ABCD4-227ENST00000557554 INTS5Q6P9B9 1019 aaKnown RBP14.12□□□□□ -0.15
ABCD4-227ENST00000557554 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
ABCD4-227ENST00000557554 DDNO94850 711 aaPredicted RBP14.11□□□□□ -0.15
ABCD4-227ENST00000557554 RASSF10A6NK89 507 aa14.1□□□□□ -0.15
ABCD4-227ENST00000557554 NFIXQ14938 502 aa14.1□□□□□ -0.15
ABCD4-227ENST00000557554 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
ABCD4-227ENST00000557554 WASHC2AQ641Q2 1341 aa14.1□□□□□ -0.15
ABCD4-227ENST00000557554 FER1L6Q2WGJ9 1857 aa14.1□□□□□ -0.15
ABCD4-227ENST00000557554 MAP2K1Q02750 393 aaPredicted RBP14.09□□□□□ -0.15
ABCD4-227ENST00000557554 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
ABCD4-227ENST00000557554 LDHDQ86WU2 507 aa14.09□□□□□ -0.15
ABCD4-227ENST00000557554 PTCD1O75127 700 aaKnown RBP14.08□□□□□ -0.16
ABCD4-227ENST00000557554 DEFB115Q30KQ5 88 aa14.08□□□□□ -0.16
ABCD4-227ENST00000557554 SERPINB2P05120 415 aa14.07□□□□□ -0.16
ABCD4-227ENST00000557554 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
ABCD4-227ENST00000557554 L3MBTL3Q96JM7 780 aaPredicted RBP14.07□□□□□ -0.16
ABCD4-227ENST00000557554 TAF1DQ9H5J8 278 aaPredicted RBP14.07□□□□□ -0.16
ABCD4-227ENST00000557554 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
ABCD4-227ENST00000557554 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
ABCD4-227ENST00000557554 LTBP3Q9NS15 1303 aa14.07□□□□□ -0.16
ABCD4-227ENST00000557554 PDE4DIPQ5VU43 2346 aa14.07□□□□□ -0.16
ABCD4-227ENST00000557554 H0YIN7 160 aa14.06□□□□□ -0.16
ABCD4-227ENST00000557554 ZPR1O75312 459 aa14.06□□□□□ -0.16
ABCD4-227ENST00000557554 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
ABCD4-227ENST00000557554 SCN4AP35499 1836 aa14.06□□□□□ -0.16
ABCD4-227ENST00000557554 TJP1Q07157 1748 aa14.05□□□□□ -0.16
ABCD4-227ENST00000557554 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
ABCD4-227ENST00000557554 C21orf2O43822 256 aa14.05□□□□□ -0.16
ABCD4-227ENST00000557554 CABP4P57796 275 aa14.05□□□□□ -0.16
ABCD4-227ENST00000557554 NARFQ9UHQ1 456 aa14.05□□□□□ -0.16
ABCD4-227ENST00000557554 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
ABCD4-227ENST00000557554 IQCA1LA6NCM1 817 aa14.04□□□□□ -0.16
ABCD4-227ENST00000557554 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
ABCD4-227ENST00000557554 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
ABCD4-227ENST00000557554 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
ABCD4-227ENST00000557554 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
ABCD4-227ENST00000557554 SOS1Q07889 1333 aaPredicted RBP14.04□□□□□ -0.16
ABCD4-227ENST00000557554 CARMIL3Q8ND23 1372 aa14.04□□□□□ -0.16
ABCD4-227ENST00000557554 ADAMTSL1Q8N6G6 1762 aa14.04□□□□□ -0.16
ABCD4-227ENST00000557554 KIF20BQ96Q89 1820 aa14.03□□□□□ -0.16
ABCD4-227ENST00000557554 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
ABCD4-227ENST00000557554 ANKRD31Q8N7Z5 1873 aa14.01□□□□□ -0.17
ABCD4-227ENST00000557554 CYP19A1P11511 503 aaPredicted RBP14.01□□□□□ -0.17
ABCD4-227ENST00000557554 CNTROBQ8N137 903 aa14.01□□□□□ -0.17
ABCD4-227ENST00000557554 TAOK3Q9H2K8 898 aa14.01□□□□□ -0.17
ABCD4-227ENST00000557554 POLKQ9UBT6 870 aa14.01□□□□□ -0.17
ABCD4-227ENST00000557554 EIF4A2Q14240 407 aaKnown RBP14□□□□□ -0.17
ABCD4-227ENST00000557554 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
ABCD4-227ENST00000557554 ZNF622Q969S3 477 aaKnown RBP eCLIP14□□□□□ -0.17
ABCD4-227ENST00000557554 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
ABCD4-227ENST00000557554 THSD7BQ9C0I4 1608 aa14□□□□□ -0.17
ABCD4-227ENST00000557554 SLX4Q8IY92 1834 aa13.99□□□□□ -0.17
ABCD4-227ENST00000557554 MTHFSP49914 203 aa13.99□□□□□ -0.17
ABCD4-227ENST00000557554 BRIP1Q9BX63 1249 aa13.99□□□□□ -0.17
ABCD4-227ENST00000557554 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
ABCD4-227ENST00000557554 PDE6BP35913 854 aa13.98□□□□□ -0.17
ABCD4-227ENST00000557554 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
ABCD4-227ENST00000557554 EAPPQ56P03 285 aaPredicted RBP13.98□□□□□ -0.17
ABCD4-227ENST00000557554 MAP1SQ66K74 1059 aaPredicted RBP13.98□□□□□ -0.17
ABCD4-227ENST00000557554 C7orf43Q8WVR3 580 aa13.98□□□□□ -0.17
ABCD4-227ENST00000557554 GPR101Q96P66 508 aaPredicted RBP13.98□□□□□ -0.17
ABCD4-227ENST00000557554 HACL1Q9UJ83 578 aa13.98□□□□□ -0.17
ABCD4-227ENST00000557554 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
ABCD4-227ENST00000557554 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
ABCD4-227ENST00000557554 EPHX2P34913 555 aa13.97□□□□□ -0.17
ABCD4-227ENST00000557554 CAPNS2Q96L46 248 aa13.97□□□□□ -0.17
ABCD4-227ENST00000557554 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
ABCD4-227ENST00000557554 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
ABCD4-227ENST00000557554 COL15A1P39059 1388 aa13.96□□□□□ -0.17
ABCD4-227ENST00000557554 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
ABCD4-227ENST00000557554 ZNF530Q6P9A1 599 aaPredicted RBP13.96□□□□□ -0.17
ABCD4-227ENST00000557554 PNMA8AQ86V59 439 aaPredicted RBP13.96□□□□□ -0.17
ABCD4-227ENST00000557554 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
ABCD4-227ENST00000557554 ABT1Q9ULW3 272 aaKnown RBP13.96□□□□□ -0.17
ABCD4-227ENST00000557554 ZBTB1Q9Y2K1 713 aa13.96□□□□□ -0.17
ABCD4-227ENST00000557554 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
ABCD4-227ENST00000557554 ZNF541Q9H0D2 1346 aa13.95□□□□□ -0.18
ABCD4-227ENST00000557554 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
ABCD4-227ENST00000557554 CST9Q5W186 159 aa13.95□□□□□ -0.18
ABCD4-227ENST00000557554 PRR5LQ6MZQ0 368 aa13.95□□□□□ -0.18
ABCD4-227ENST00000557554 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
ABCD4-227ENST00000557554 SRGNP10124 158 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 MAP2K2P36507 400 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 TBC1D9BQ66K14 1250 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 CYP4F22Q6NT55 531 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
ABCD4-227ENST00000557554 BICDL1Q6ZP65 573 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 CNKSR1Q969H4 720 aa13.94□□□□□ -0.18
ABCD4-227ENST00000557554 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
ABCD4-227ENST00000557554 ECE1P42892 770 aa13.93□□□□□ -0.18
ABCD4-227ENST00000557554 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms