RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CCDC146Q8IYE0 955 aa20.92■□□□□ 0.94
TUBB3-214ENST00000557490 TNS4Q8IZW8 715 aa20.92■□□□□ 0.94
TUBB3-214ENST00000557490 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
TUBB3-214ENST00000557490 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
TUBB3-214ENST00000557490 RPS6KA4O75676 772 aa20.91■□□□□ 0.94
TUBB3-214ENST00000557490 TOMM70O94826 608 aa20.91■□□□□ 0.94
TUBB3-214ENST00000557490 RIPK4P57078 832 aa20.91■□□□□ 0.94
TUBB3-214ENST00000557490 TRAPPC3LQ5T215 181 aa20.91■□□□□ 0.94
TUBB3-214ENST00000557490 ZNF496Q96IT1 587 aaPredicted RBP20.91■□□□□ 0.94
TUBB3-214ENST00000557490 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
TUBB3-214ENST00000557490 ADRA2BP18089 450 aa20.9■□□□□ 0.94
TUBB3-214ENST00000557490 TAF7Q15545 349 aaPredicted RBP20.9■□□□□ 0.94
TUBB3-214ENST00000557490 WWC3Q9ULE0 1092 aa20.9■□□□□ 0.94
TUBB3-214ENST00000557490 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.93
TUBB3-214ENST00000557490 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
TUBB3-214ENST00000557490 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.93
TUBB3-214ENST00000557490 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.93
TUBB3-214ENST00000557490 HEG1Q9ULI3 1381 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 KCNQ3O43525 872 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 STARD3NLO95772 234 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 CYP19A1P11511 503 aaPredicted RBP20.88■□□□□ 0.93
TUBB3-214ENST00000557490 JMYQ8N9B5 988 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
TUBB3-214ENST00000557490 KLRG1Q96E93 195 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 CCDC87Q9NVE4 849 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 UBR3Q6ZT12 1888 aa20.88■□□□□ 0.93
TUBB3-214ENST00000557490 SIPA1L3O60292 1781 aaPredicted RBP20.87■□□□□ 0.93
TUBB3-214ENST00000557490 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
TUBB3-214ENST00000557490 THUMPD2Q9BTF0 503 aaKnown RBP20.87■□□□□ 0.93
TUBB3-214ENST00000557490 COL5A3P25940 1745 aaPredicted RBP20.87■□□□□ 0.93
TUBB3-214ENST00000557490 TJP1Q07157 1748 aa20.87■□□□□ 0.93
TUBB3-214ENST00000557490 RFC4P35249 363 aa20.86■□□□□ 0.93
TUBB3-214ENST00000557490 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
TUBB3-214ENST00000557490 ARHGEF1Q92888 912 aaKnown RBP20.86■□□□□ 0.93
TUBB3-214ENST00000557490 RRP7AQ9Y3A4 280 aaKnown RBP20.86■□□□□ 0.93
TUBB3-214ENST00000557490 HTRA3P83110 453 aa20.85■□□□□ 0.93
TUBB3-214ENST00000557490 CCDC184Q52MB2 194 aa20.85■□□□□ 0.93
TUBB3-214ENST00000557490 MRS2Q9HD23 443 aa20.85■□□□□ 0.93
TUBB3-214ENST00000557490 UBR2Q8IWV8 1755 aa20.85■□□□□ 0.93
TUBB3-214ENST00000557490 MIS18AQ9NYP9 233 aa20.84■□□□□ 0.93
TUBB3-214ENST00000557490 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.93
TUBB3-214ENST00000557490 DLG5Q8TDM6 1919 aa20.82■□□□□ 0.92
TUBB3-214ENST00000557490 ZBTB1Q9Y2K1 713 aa20.82■□□□□ 0.92
TUBB3-214ENST00000557490 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
TUBB3-214ENST00000557490 CANXP27824 592 aaKnown RBP20.81■□□□□ 0.92
TUBB3-214ENST00000557490 NMRK2Q9NPI5 230 aa20.81■□□□□ 0.92
TUBB3-214ENST00000557490 MYH14Q7Z406 1995 aaKnown RBP20.81■□□□□ 0.92
TUBB3-214ENST00000557490 NLGN1Q8N2Q7 840 aa20.8■□□□□ 0.92
TUBB3-214ENST00000557490 APAF1O14727 1248 aa20.79■□□□□ 0.92
TUBB3-214ENST00000557490 SLC34A2O95436 690 aa20.79■□□□□ 0.92
TUBB3-214ENST00000557490 TSPYL4Q9UJ04 414 aa20.79■□□□□ 0.92
TUBB3-214ENST00000557490 ZPR1O75312 459 aa20.78■□□□□ 0.92
TUBB3-214ENST00000557490 GYS1P13807 737 aa20.78■□□□□ 0.92
TUBB3-214ENST00000557490 RBM46Q8TBY0 533 aaKnown RBP20.78■□□□□ 0.92
TUBB3-214ENST00000557490 BABAM1Q9NWV8 329 aa20.78■□□□□ 0.92
TUBB3-214ENST00000557490 TRIM35Q9UPQ4 493 aa20.78■□□□□ 0.92
TUBB3-214ENST00000557490 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
TUBB3-214ENST00000557490 COL15A1P39059 1388 aa20.77■□□□□ 0.92
TUBB3-214ENST00000557490 A0A087WZG4 1122 aa20.77■□□□□ 0.92
TUBB3-214ENST00000557490 A1BGP04217 495 aa20.77■□□□□ 0.92
TUBB3-214ENST00000557490 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
TUBB3-214ENST00000557490 SRP68Q9UHB9 627 aaKnown RBP20.77■□□□□ 0.92
TUBB3-214ENST00000557490 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
TUBB3-214ENST00000557490 PRAMEF22A3QJZ6 481 aa20.76■□□□□ 0.91
TUBB3-214ENST00000557490 MMP10P09238 476 aa20.76■□□□□ 0.91
TUBB3-214ENST00000557490 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
TUBB3-214ENST00000557490 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
TUBB3-214ENST00000557490 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
TUBB3-214ENST00000557490 NARFQ9UHQ1 456 aa20.75■□□□□ 0.91
TUBB3-214ENST00000557490 ZNF330Q9Y3S2 320 aaPredicted RBP20.75■□□□□ 0.91
TUBB3-214ENST00000557490 USPL1Q5W0Q7 1092 aa20.74■□□□□ 0.91
TUBB3-214ENST00000557490 LAS1LQ9Y4W2 734 aaKnown RBP20.74■□□□□ 0.91
TUBB3-214ENST00000557490 FKBP8Q14318 412 aa20.73■□□□□ 0.91
TUBB3-214ENST00000557490 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
TUBB3-214ENST00000557490 PARP3Q9Y6F1 533 aa20.72■□□□□ 0.91
TUBB3-214ENST00000557490 KIAA1551Q9HCM1 1747 aa20.72■□□□□ 0.91
TUBB3-214ENST00000557490 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
TUBB3-214ENST00000557490 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
TUBB3-214ENST00000557490 FSTL1Q12841 308 aa20.71■□□□□ 0.91
TUBB3-214ENST00000557490 PXDNLA1KZ92 1463 aa20.7■□□□□ 0.9
TUBB3-214ENST00000557490 CHL1O00533 1208 aa20.7■□□□□ 0.9
TUBB3-214ENST00000557490 C16orf71Q8IYS4 520 aaPredicted RBP20.7■□□□□ 0.9
TUBB3-214ENST00000557490 KIF13BQ9NQT8 1826 aa20.69■□□□□ 0.9
TUBB3-214ENST00000557490 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
TUBB3-214ENST00000557490 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
TUBB3-214ENST00000557490 N4BP2Q86UW6 1770 aaPredicted RBP20.69■□□□□ 0.9
TUBB3-214ENST00000557490 FAM9BQ8IZU0 186 aa20.68■□□□□ 0.9
TUBB3-214ENST00000557490 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
TUBB3-214ENST00000557490 NBPF26B4DH59 902 aa20.67■□□□□ 0.9
TUBB3-214ENST00000557490 NBPF10Q6P3W6 841 aaKnown RBP20.67■□□□□ 0.9
TUBB3-214ENST00000557490 DZIP3Q86Y13 1208 aaKnown RBP20.67■□□□□ 0.9
TUBB3-214ENST00000557490 NBPF15Q8N660 670 aa20.67■□□□□ 0.9
TUBB3-214ENST00000557490 HSPA1AP0DMV8 641 aaKnown RBP20.66■□□□□ 0.9
TUBB3-214ENST00000557490 HSPA1BP0DMV9 641 aaKnown RBP20.66■□□□□ 0.9
TUBB3-214ENST00000557490 TM4SF1P30408 202 aa20.66■□□□□ 0.9
TUBB3-214ENST00000557490 DDR1Q08345 913 aa20.66■□□□□ 0.9
TUBB3-214ENST00000557490 BCL2L12Q9HB09 334 aa20.66■□□□□ 0.9
TUBB3-214ENST00000557490 IFT57Q9NWB7 429 aa20.66■□□□□ 0.9
TUBB3-214ENST00000557490 GNAI1P63096 354 aa20.65■□□□□ 0.9
TUBB3-214ENST00000557490 NFIXQ14938 502 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms