RNA–Protein interactions for RNA: ENST00000557435.1

SRSF5-218, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-218ENST00000557435 SSFA2P28290 1259 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 INTS5Q6P9B9 1019 aaKnown RBP12.3□□□□□ -0.44
SRSF5-218ENST00000557435 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
SRSF5-218ENST00000557435 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 AK7Q96M32 723 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 TJP1Q07157 1748 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
SRSF5-218ENST00000557435 KDM3BQ7LBC6 1761 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 STARD3NLO95772 234 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 SNRPA1P09661 255 aaKnown RBP12.29□□□□□ -0.44
SRSF5-218ENST00000557435 ZNF853P0CG23 659 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
SRSF5-218ENST00000557435 EIF4A1P60842 406 aaKnown RBP12.29□□□□□ -0.44
SRSF5-218ENST00000557435 AMIGO3Q86WK7 504 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 MIER1Q8N108 512 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
SRSF5-218ENST00000557435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
SRSF5-218ENST00000557435 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
SRSF5-218ENST00000557435 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
SRSF5-218ENST00000557435 RTCBQ9Y3I0 505 aaKnown RBP12.28□□□□□ -0.44
SRSF5-218ENST00000557435 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
SRSF5-218ENST00000557435 GNPATO15228 680 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.45
SRSF5-218ENST00000557435 TRAPPC3LQ5T215 181 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 WWC1Q8IX03 1113 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
SRSF5-218ENST00000557435 ARHGEF1Q92888 912 aaKnown RBP12.26□□□□□ -0.45
SRSF5-218ENST00000557435 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
SRSF5-218ENST00000557435 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
SRSF5-218ENST00000557435 PTGER2P43116 358 aa12.25□□□□□ -0.45
SRSF5-218ENST00000557435 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
SRSF5-218ENST00000557435 GNAI1P63096 354 aa12.25□□□□□ -0.45
SRSF5-218ENST00000557435 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
SRSF5-218ENST00000557435 LRP5O75197 1615 aa12.25□□□□□ -0.45
SRSF5-218ENST00000557435 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
SRSF5-218ENST00000557435 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
SRSF5-218ENST00000557435 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
SRSF5-218ENST00000557435 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
SRSF5-218ENST00000557435 IL16Q14005 1332 aa12.24□□□□□ -0.45
SRSF5-218ENST00000557435 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
SRSF5-218ENST00000557435 ZBTB1Q9Y2K1 713 aa12.24□□□□□ -0.45
SRSF5-218ENST00000557435 A1BGP04217 495 aa12.23□□□□□ -0.45
SRSF5-218ENST00000557435 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
SRSF5-218ENST00000557435 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
SRSF5-218ENST00000557435 PHF14O94880 888 aa12.22□□□□□ -0.45
SRSF5-218ENST00000557435 HOXB7P09629 217 aa12.22□□□□□ -0.45
SRSF5-218ENST00000557435 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
SRSF5-218ENST00000557435 RFC4P35249 363 aa12.22□□□□□ -0.45
SRSF5-218ENST00000557435 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
SRSF5-218ENST00000557435 ERBB4Q15303 1308 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 ZNF521Q96K83 1311 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 A0A087WZG4 1122 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 GYS1P13807 737 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.45
SRSF5-218ENST00000557435 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
SRSF5-218ENST00000557435 NBPF15Q8N660 670 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
SRSF5-218ENST00000557435 LAS1LQ9Y4W2 734 aaKnown RBP12.21□□□□□ -0.45
SRSF5-218ENST00000557435 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
SRSF5-218ENST00000557435 DSG3P32926 999 aa12.2□□□□□ -0.46
SRSF5-218ENST00000557435 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
SRSF5-218ENST00000557435 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
SRSF5-218ENST00000557435 COL15A1P39059 1388 aa12.19□□□□□ -0.46
SRSF5-218ENST00000557435 RGL2O15211 777 aa12.19□□□□□ -0.46
SRSF5-218ENST00000557435 POLD1P28340 1107 aa12.19□□□□□ -0.46
SRSF5-218ENST00000557435 PDIA6Q15084 440 aa12.19□□□□□ -0.46
SRSF5-218ENST00000557435 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 ZPR1O75312 459 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 TM4SF1P30408 202 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 DUSP27Q5VZP5 1158 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 LRP10Q7Z4F1 713 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 ARXQ96QS3 562 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
SRSF5-218ENST00000557435 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
SRSF5-218ENST00000557435 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
SRSF5-218ENST00000557435 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
SRSF5-218ENST00000557435 CHMP4AQ9BY43 222 aa12.17□□□□□ -0.46
SRSF5-218ENST00000557435 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
SRSF5-218ENST00000557435 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
SRSF5-218ENST00000557435 EIF2S2P20042 333 aaKnown RBP12.16□□□□□ -0.46
SRSF5-218ENST00000557435 FKBP8Q14318 412 aa12.16□□□□□ -0.46
SRSF5-218ENST00000557435 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
SRSF5-218ENST00000557435 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
SRSF5-218ENST00000557435 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
SRSF5-218ENST00000557435 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
SRSF5-218ENST00000557435 TBC1D2BQ9UPU7 963 aa12.16□□□□□ -0.46
SRSF5-218ENST00000557435 ERVV-1B6SEH8 477 aa12.15□□□□□ -0.46
SRSF5-218ENST00000557435 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
SRSF5-218ENST00000557435 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
SRSF5-218ENST00000557435 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
SRSF5-218ENST00000557435 PPP1R1BQ9UD71 204 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms