RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 TNS1Q9HBL0 1735 aaKnown RBP15.36■□□□□ 0.05
APEX1-219ENST00000557365 RREB1Q92766 1687 aa15.35■□□□□ 0.05
APEX1-219ENST00000557365 COL5A3P25940 1745 aaPredicted RBP15.35■□□□□ 0.05
APEX1-219ENST00000557365 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
APEX1-219ENST00000557365 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
APEX1-219ENST00000557365 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
APEX1-219ENST00000557365 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
APEX1-219ENST00000557365 PTPRCP08575 1304 aa15.35■□□□□ 0.05
APEX1-219ENST00000557365 TAF1LQ8IZX4 1826 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 CYP19A1P11511 503 aaPredicted RBP15.34■□□□□ 0.05
APEX1-219ENST00000557365 MS4A1P11836 297 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
APEX1-219ENST00000557365 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
APEX1-219ENST00000557365 PDIA6Q15084 440 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 CCDC125Q86Z20 511 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
APEX1-219ENST00000557365 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
APEX1-219ENST00000557365 PDE3AQ14432 1141 aa15.32■□□□□ 0.04
APEX1-219ENST00000557365 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
APEX1-219ENST00000557365 LRP10Q7Z4F1 713 aa15.32■□□□□ 0.04
APEX1-219ENST00000557365 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
APEX1-219ENST00000557365 EP400Q96L91 3159 aa15.31■□□□□ 0.04
APEX1-219ENST00000557365 ITPK1Q13572 414 aa15.31■□□□□ 0.04
APEX1-219ENST00000557365 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
APEX1-219ENST00000557365 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
APEX1-219ENST00000557365 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
APEX1-219ENST00000557365 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
APEX1-219ENST00000557365 NOB1Q9ULX3 412 aaKnown RBP15.31■□□□□ 0.04
APEX1-219ENST00000557365 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
APEX1-219ENST00000557365 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
APEX1-219ENST00000557365 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
APEX1-219ENST00000557365 APBA3O96018 575 aa15.3■□□□□ 0.04
APEX1-219ENST00000557365 IL6STP40189 918 aaPredicted RBP15.3■□□□□ 0.04
APEX1-219ENST00000557365 FLIIQ13045 1269 aa15.3■□□□□ 0.04
APEX1-219ENST00000557365 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
APEX1-219ENST00000557365 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
APEX1-219ENST00000557365 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
APEX1-219ENST00000557365 A1BGP04217 495 aa15.29■□□□□ 0.04
APEX1-219ENST00000557365 INTS5Q6P9B9 1019 aaKnown RBP15.29■□□□□ 0.04
APEX1-219ENST00000557365 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
APEX1-219ENST00000557365 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
APEX1-219ENST00000557365 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
APEX1-219ENST00000557365 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
APEX1-219ENST00000557365 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
APEX1-219ENST00000557365 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
APEX1-219ENST00000557365 RGL2O15211 777 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 TRIM27P14373 513 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
APEX1-219ENST00000557365 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
APEX1-219ENST00000557365 TXNRD1Q16881 649 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 PROSER3Q2NL68 480 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 G2E3Q7L622 706 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 PROM2Q8N271 834 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.04
APEX1-219ENST00000557365 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
APEX1-219ENST00000557365 PHAXQ9H814 394 aaKnown RBP15.27■□□□□ 0.04
APEX1-219ENST00000557365 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
APEX1-219ENST00000557365 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
APEX1-219ENST00000557365 ABCC4O15439 1325 aa15.26■□□□□ 0.03
APEX1-219ENST00000557365 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
APEX1-219ENST00000557365 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
APEX1-219ENST00000557365 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
APEX1-219ENST00000557365 LRRC4BQ9NT99 713 aa15.26■□□□□ 0.03
APEX1-219ENST00000557365 PXDNLA1KZ92 1463 aa15.26■□□□□ 0.03
APEX1-219ENST00000557365 PLIN1O60240 522 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 RPS6KA4O75676 772 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 MYL6BP14649 208 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 BAG6P46379 1132 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
APEX1-219ENST00000557365 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 COPS6Q7L5N1 327 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 CAMKK2Q96RR4 588 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 ZBTB1Q9Y2K1 713 aa15.25■□□□□ 0.03
APEX1-219ENST00000557365 A0A087WZG4 1122 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 ANXA1P04083 346 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 NEFLP07196 543 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 AAMPQ13685 434 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
APEX1-219ENST00000557365 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
APEX1-219ENST00000557365 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
APEX1-219ENST00000557365 ADRA2BP18089 450 aa15.23■□□□□ 0.03
APEX1-219ENST00000557365 NPM2Q86SE8 214 aaKnown RBP15.23■□□□□ 0.03
APEX1-219ENST00000557365 FTSJ3Q8IY81 847 aaKnown RBP15.23■□□□□ 0.03
APEX1-219ENST00000557365 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
APEX1-219ENST00000557365 UBR3Q6ZT12 1888 aa15.23■□□□□ 0.03
APEX1-219ENST00000557365 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
APEX1-219ENST00000557365 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
APEX1-219ENST00000557365 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
APEX1-219ENST00000557365 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
APEX1-219ENST00000557365 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
APEX1-219ENST00000557365 NUP188Q5SRE5 1749 aa15.22■□□□□ 0.03
APEX1-219ENST00000557365 ADCY9O60503 1353 aa15.22■□□□□ 0.03
APEX1-219ENST00000557365 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.03
APEX1-219ENST00000557365 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
APEX1-219ENST00000557365 MAP3K15Q6ZN16 1313 aa15.2■□□□□ 0.02
APEX1-219ENST00000557365 RLBP1P12271 317 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms