RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 HMGN5P82970 282 aaKnown RBP9.77□□□□□ -0.85
CHD8-213ENST00000557364 XPCQ01831 940 aaPredicted RBP9.77□□□□□ -0.85
CHD8-213ENST00000557364 SPDYE4A6NLX3 237 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 SERPINC1P01008 464 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 SNRPA1P09661 255 aaKnown RBP9.77□□□□□ -0.85
CHD8-213ENST00000557364 CHD1LQ86WJ1 897 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 SH2B1Q9NRF2 756 aaPredicted RBP9.77□□□□□ -0.85
CHD8-213ENST00000557364 PDRG1Q9NUG6 133 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 WDR7Q9Y4E6 1490 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 ABCC10Q5T3U5 1492 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 TSPY26PQ9H489 355 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 USP37Q86T82 979 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 CIZ1Q9ULV3 898 aaPredicted RBP9.76□□□□□ -0.85
CHD8-213ENST00000557364 A2MP01023 1474 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 PIK3R4Q99570 1358 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 CCDC181Q5TID7 509 aa9.76□□□□□ -0.85
CHD8-213ENST00000557364 TRPM2O94759 1503 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 AMPD3Q01432 767 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 CCDC96Q2M329 555 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 NBPF6Q5VWK0 638 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 NBPF5PQ86XG9 351 aaPredicted RBP9.75□□□□□ -0.85
CHD8-213ENST00000557364 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 NBPF4Q96M43 638 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 SSBP05455 408 aaKnown RBP eCLIP9.75□□□□□ -0.856e-9■■■■□ 22.6
CHD8-213ENST00000557364 PLCG2P16885 1265 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 MRE11P49959 708 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 LRRC59Q96AG4 307 aaKnown RBP9.75□□□□□ -0.85
CHD8-213ENST00000557364 NEFHP12036 1026 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 SETDB2Q96T68 719 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 CWC15Q9P013 229 aaKnown RBP9.75□□□□□ -0.85
CHD8-213ENST00000557364 TNMDQ9H2S6 317 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 ASXL2Q76L83 1435 aa9.75□□□□□ -0.85
CHD8-213ENST00000557364 FERMT2Q96AC1 680 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 NAIPQ13075 1403 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 HOOK2Q96ED9 719 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
CHD8-213ENST00000557364 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
CHD8-213ENST00000557364 IDI1Q13907 227 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 LRRC45Q96CN5 670 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
CHD8-213ENST00000557364 IL16Q14005 1332 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 PLCH2O75038 1416 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 GOLGA6L7A0A1B0GV03 622 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
CHD8-213ENST00000557364 FKBP15Q5T1M5 1219 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 DHX37Q8IY37 1157 aaKnown RBP9.74□□□□□ -0.85
CHD8-213ENST00000557364 EYA3Q99504 573 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 MYD88Q99836 296 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 ABCC5O15440 1437 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 ZNF710Q8N1W2 664 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
CHD8-213ENST00000557364 C19orf44Q9H6X5 657 aa9.74□□□□□ -0.85
CHD8-213ENST00000557364 NUP160Q12769 1436 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 ZNF213O14771 459 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 WDR78Q5VTH9 848 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 CERS3Q8IU89 383 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 SLC12A7Q9Y666 1083 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 EPB41L2O43491 1005 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 PUS7Q96PZ0 661 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 C14orf93Q9H972 538 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 CCDC194A0A1B0GVG4 234 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 ERLIN1O75477 346 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 LMOD1P29536 600 aaPredicted RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 GNAQP50148 359 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 DDB1Q16531 1140 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 ZNF804AQ7Z570 1209 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 WAPLQ7Z5K2 1190 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 JDP2Q8WYK2 163 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 NLRP3Q96P20 1036 aa9.73□□□□□ -0.85
CHD8-213ENST00000557364 APBB1IPQ7Z5R6 666 aaPredicted RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
CHD8-213ENST00000557364 MINDY4BA8MYZ0 360 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 BMP15O95972 392 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 MX1P20591 662 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 ERMNQ8TAM6 284 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 TAF4BQ92750 862 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 ZNF622Q969S3 477 aaKnown RBP eCLIP9.72□□□□□ -0.856e-7■■■□□ 15.3
CHD8-213ENST00000557364 JAKMIP1Q96N16 626 aaKnown RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 GTPBP4Q9BZE4 634 aaKnown RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 HMG20BQ9P0W2 317 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 EVI5LQ96CN4 794 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 FIBPO43427 364 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 TNNI2P48788 182 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 ANKRD24Q8TF21 1146 aa9.72□□□□□ -0.85
CHD8-213ENST00000557364 SCAND2PQ9GZW5 306 aaPredicted RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 NCBP1Q09161 790 aaKnown RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
CHD8-213ENST00000557364 NOS1P29475 1434 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms