RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 RABEP1Q15276 862 aa23.65■■□□□ 1.38
FOXN3-214ENST00000557258 PA2G4Q9UQ80 394 aaKnown RBP23.65■■□□□ 1.38
FOXN3-214ENST00000557258 REC8O95072 547 aa23.65■■□□□ 1.38
FOXN3-214ENST00000557258 PKP1Q13835 747 aa23.64■■□□□ 1.38
FOXN3-214ENST00000557258 C9orf78Q9NZ63 289 aaPredicted RBP23.64■■□□□ 1.38
FOXN3-214ENST00000557258 MED1Q15648 1581 aaPredicted RBP23.64■■□□□ 1.38
FOXN3-214ENST00000557258 OS9Q13438 667 aaPredicted RBP23.64■■□□□ 1.37
FOXN3-214ENST00000557258 PALD1Q9ULE6 856 aa23.64■■□□□ 1.37
FOXN3-214ENST00000557258 RHPN1Q8TCX5 695 aa23.63■■□□□ 1.37
FOXN3-214ENST00000557258 SLIT3O75094 1523 aa23.63■■□□□ 1.37
FOXN3-214ENST00000557258 ZGPATQ8N5A5 531 aaKnown RBP23.63■■□□□ 1.37
FOXN3-214ENST00000557258 AK9Q5TCS8 1911 aa23.63■■□□□ 1.37
FOXN3-214ENST00000557258 JARID2Q92833 1246 aaPredicted RBP23.62■■□□□ 1.37
FOXN3-214ENST00000557258 ESYT1Q9BSJ8 1104 aa23.62■■□□□ 1.37
FOXN3-214ENST00000557258 RAB3GAP1Q15042 981 aa23.61■■□□□ 1.37
FOXN3-214ENST00000557258 CHMLP26374 656 aa23.61■■□□□ 1.37
FOXN3-214ENST00000557258 KDM3BQ7LBC6 1761 aa23.61■■□□□ 1.37
FOXN3-214ENST00000557258 HOXB7P09629 217 aa23.6■■□□□ 1.37
FOXN3-214ENST00000557258 FOXD4L5Q5VV16 416 aaPredicted RBP23.6■■□□□ 1.37
FOXN3-214ENST00000557258 FOXD4L4Q8WXT5 416 aaPredicted RBP23.6■■□□□ 1.37
FOXN3-214ENST00000557258 CHAMP1Q96JM3 812 aa23.6■■□□□ 1.37
FOXN3-214ENST00000557258 TRPM3Q9HCF6 1732 aaPredicted RBP23.6■■□□□ 1.37
FOXN3-214ENST00000557258 NEK4P51957 841 aa23.59■■□□□ 1.37
FOXN3-214ENST00000557258 POLA2Q14181 598 aa23.59■■□□□ 1.37
FOXN3-214ENST00000557258 PXDNLA1KZ92 1463 aa23.59■■□□□ 1.37
FOXN3-214ENST00000557258 LMO7Q8WWI1 1683 aa23.59■■□□□ 1.37
FOXN3-214ENST00000557258 MST1RQ04912 1400 aa23.58■■□□□ 1.37
FOXN3-214ENST00000557258 CACNA1FO60840 1977 aa23.58■■□□□ 1.37
FOXN3-214ENST00000557258 ZNF790Q6PG37 636 aa23.58■■□□□ 1.37
FOXN3-214ENST00000557258 UPF3BQ9BZI7 483 aaKnown RBP23.57■■□□□ 1.36
FOXN3-214ENST00000557258 KSR2Q6VAB6 950 aa23.57■■□□□ 1.36
FOXN3-214ENST00000557258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.57■■□□□ 1.36
FOXN3-214ENST00000557258 MEGF6O75095 1541 aa23.57■■□□□ 1.36
FOXN3-214ENST00000557258 NPHP3Q7Z494 1330 aa23.57■■□□□ 1.36
FOXN3-214ENST00000557258 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
FOXN3-214ENST00000557258 KLHDC4Q8TBB5 520 aa23.56■■□□□ 1.36
FOXN3-214ENST00000557258 ZNF496Q96IT1 587 aaPredicted RBP23.56■■□□□ 1.36
FOXN3-214ENST00000557258 SIL1Q9H173 461 aa23.56■■□□□ 1.36
FOXN3-214ENST00000557258 ST18O60284 1047 aa23.56■■□□□ 1.36
FOXN3-214ENST00000557258 PHKG2P15735 406 aa23.56■■□□□ 1.36
FOXN3-214ENST00000557258 PDIA6Q15084 440 aa23.55■■□□□ 1.36
FOXN3-214ENST00000557258 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
FOXN3-214ENST00000557258 STAP2Q9UGK3 403 aa23.55■■□□□ 1.36
FOXN3-214ENST00000557258 KDM6AO15550 1401 aaPredicted RBP23.55■■□□□ 1.36
FOXN3-214ENST00000557258 DDX11L8A8MPP1 907 aa23.55■■□□□ 1.36
FOXN3-214ENST00000557258 PI4K2BQ8TCG2 481 aa23.55■■□□□ 1.36
FOXN3-214ENST00000557258 KIF1BPQ96EK5 621 aa23.55■■□□□ 1.36
FOXN3-214ENST00000557258 PHRF1Q9P1Y6 1649 aaKnown RBP23.55■■□□□ 1.36
FOXN3-214ENST00000557258 CYP27B1O15528 508 aa23.54■■□□□ 1.36
FOXN3-214ENST00000557258 RIC3Q7Z5B4 369 aa23.54■■□□□ 1.36
FOXN3-214ENST00000557258 SUCLG2Q96I99 432 aa23.54■■□□□ 1.36
FOXN3-214ENST00000557258 GBP4Q96PP9 640 aa23.54■■□□□ 1.36
FOXN3-214ENST00000557258 PANK2Q9BZ23 570 aa23.54■■□□□ 1.36
FOXN3-214ENST00000557258 CIZ1Q9ULV3 898 aaPredicted RBP23.54■■□□□ 1.36
FOXN3-214ENST00000557258 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
FOXN3-214ENST00000557258 NCAPD2Q15021 1401 aa23.53■■□□□ 1.36
FOXN3-214ENST00000557258 BICC1Q9H694 974 aaKnown RBP23.53■■□□□ 1.36
FOXN3-214ENST00000557258 XAGE3Q8WTP9 111 aa23.52■■□□□ 1.36
FOXN3-214ENST00000557258 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
FOXN3-214ENST00000557258 CWC27Q6UX04 472 aaKnown RBP23.52■■□□□ 1.36
FOXN3-214ENST00000557258 COPS6Q7L5N1 327 aa23.52■■□□□ 1.36
FOXN3-214ENST00000557258 LARP6Q9BRS8 491 aaKnown RBP23.52■■□□□ 1.36
FOXN3-214ENST00000557258 DTNBO60941 627 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 RAB11FIP3O75154 756 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 KAZALD1Q96I82 304 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 HYPKQ9NX55 129 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 HEG1Q9ULI3 1381 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 IGKV5-2P06315 115 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 DDX21Q9NR30 783 aaKnown RBP eCLIP23.51■■□□□ 1.35
FOXN3-214ENST00000557258 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
FOXN3-214ENST00000557258 GOLGA6L3A6NEY3 463 aa23.5■■□□□ 1.35
FOXN3-214ENST00000557258 GRM8O00222 908 aa23.5■■□□□ 1.35
FOXN3-214ENST00000557258 MYD88Q99836 296 aa23.5■■□□□ 1.35
FOXN3-214ENST00000557258 CADPS2Q86UW7 1296 aa23.49■■□□□ 1.35
FOXN3-214ENST00000557258 MCTP1Q6DN14 999 aa23.49■■□□□ 1.35
FOXN3-214ENST00000557258 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
FOXN3-214ENST00000557258 XRCC6P12956 609 aaKnown RBP eCLIP23.48■■□□□ 1.35
FOXN3-214ENST00000557258 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
FOXN3-214ENST00000557258 TMX3Q96JJ7 454 aa23.48■■□□□ 1.35
FOXN3-214ENST00000557258 ATP5J2-PTCD1G3V325 749 aa23.47■■□□□ 1.35
FOXN3-214ENST00000557258 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
FOXN3-214ENST00000557258 BAG4O95429 457 aaKnown RBP23.47■■□□□ 1.35
FOXN3-214ENST00000557258 AACSQ86V21 672 aa23.47■■□□□ 1.35
FOXN3-214ENST00000557258 CCDC8Q9H0W5 538 aaPredicted RBP23.47■■□□□ 1.35
FOXN3-214ENST00000557258 ALS2Q96Q42 1657 aa23.47■■□□□ 1.35
FOXN3-214ENST00000557258 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
FOXN3-214ENST00000557258 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
FOXN3-214ENST00000557258 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
FOXN3-214ENST00000557258 LINS1Q8NG48 757 aa23.47■■□□□ 1.35
FOXN3-214ENST00000557258 DDX58O95786 925 aaKnown RBP23.46■■□□□ 1.35
FOXN3-214ENST00000557258 EPHA10Q5JZY3 1008 aa23.46■■□□□ 1.35
FOXN3-214ENST00000557258 CLASRPQ8N2M8 674 aaKnown RBP23.46■■□□□ 1.35
FOXN3-214ENST00000557258 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
FOXN3-214ENST00000557258 N4BP2Q86UW6 1770 aaPredicted RBP23.46■■□□□ 1.35
FOXN3-214ENST00000557258 CHMP4AQ9BY43 222 aa23.46■■□□□ 1.35
FOXN3-214ENST00000557258 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
FOXN3-214ENST00000557258 ALDH1L1O75891 902 aa23.46■■□□□ 1.35
FOXN3-214ENST00000557258 MCCP23508 829 aa23.45■■□□□ 1.34
FOXN3-214ENST00000557258 DDX54Q8TDD1 881 aaKnown RBP23.45■■□□□ 1.34
FOXN3-214ENST00000557258 IFIT2P09913 472 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms