RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 LTV1Q96GA3 475 aaPredicted RBP13.75□□□□□ -0.21
SRP54-213ENST00000556994 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
SRP54-213ENST00000556994 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.75□□□□□ -0.21
SRP54-213ENST00000556994 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
SRP54-213ENST00000556994 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
SRP54-213ENST00000556994 SLC26A8Q96RN1 970 aa13.75□□□□□ -0.21
SRP54-213ENST00000556994 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
SRP54-213ENST00000556994 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
SRP54-213ENST00000556994 AK2P54819 239 aa13.74□□□□□ -0.21
SRP54-213ENST00000556994 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 CWC27Q6UX04 472 aaKnown RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 PHF14O94880 888 aa13.74□□□□□ -0.21
SRP54-213ENST00000556994 HCLS1P14317 486 aaPredicted RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 KIAA2012Q0VF49 1180 aa13.74□□□□□ -0.21
SRP54-213ENST00000556994 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
SRP54-213ENST00000556994 C17orf53Q8N3J3 647 aaPredicted RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
SRP54-213ENST00000556994 PI4K2BQ8TCG2 481 aa13.74□□□□□ -0.21
SRP54-213ENST00000556994 FLT4P35916 1363 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 SGSM2O43147 1006 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
SRP54-213ENST00000556994 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 KDRP35968 1356 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 SRGAP3O43295 1099 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 FIBPO43427 364 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 ADCY5O95622 1261 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
SRP54-213ENST00000556994 ZSCAN22P10073 491 aaPredicted RBP13.73□□□□□ -0.21
SRP54-213ENST00000556994 SYT1P21579 422 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
SRP54-213ENST00000556994 XRN1Q8IZH2 1706 aaKnown RBP13.72□□□□□ -0.21
SRP54-213ENST00000556994 AGLP35573 1532 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 LARGE1O95461 756 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 LTKP29376 864 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 DDX54Q8TDD1 881 aaKnown RBP13.72□□□□□ -0.21
SRP54-213ENST00000556994 TSC1Q92574 1164 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 IL17RAQ96F46 866 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 LSG1Q9H089 658 aaKnown RBP13.72□□□□□ -0.21
SRP54-213ENST00000556994 RAD50Q92878 1312 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 DYNC1I1O14576 645 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 STX6O43752 255 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
SRP54-213ENST00000556994 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 TTC14Q96N46 770 aa13.72□□□□□ -0.21
SRP54-213ENST00000556994 NLRP6P59044 892 aa13.71□□□□□ -0.21
SRP54-213ENST00000556994 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.21
SRP54-213ENST00000556994 CASTP20810 708 aaKnown RBP13.7□□□□□ -0.22
SRP54-213ENST00000556994 AOX1Q06278 1338 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 SMC3Q9UQE7 1217 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 ADAMTS13Q76LX8 1427 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 TMEM2Q9UHN6 1383 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 ANXA1P04083 346 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
SRP54-213ENST00000556994 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
SRP54-213ENST00000556994 RAB11FIP3O75154 756 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 F13A1P00488 732 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 POLA2Q14181 598 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 TMEM87AQ8NBN3 555 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
SRP54-213ENST00000556994 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 UBE2HP62256 183 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 DNM1Q05193 864 aaKnown RBP13.69□□□□□ -0.22
SRP54-213ENST00000556994 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
SRP54-213ENST00000556994 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
SRP54-213ENST00000556994 TTC21AQ8NDW8 1320 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 GJB2P29033 226 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 PTH1RQ03431 593 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
SRP54-213ENST00000556994 TOPAZ1Q8N9V7 1692 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 TNRQ92752 1358 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 HOXC9P31274 260 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
SRP54-213ENST00000556994 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 AMOTL2Q9Y2J4 779 aa13.68□□□□□ -0.22
SRP54-213ENST00000556994 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
SRP54-213ENST00000556994 AP5Z1O43299 807 aa13.67□□□□□ -0.22
SRP54-213ENST00000556994 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
SRP54-213ENST00000556994 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
SRP54-213ENST00000556994 HYPKQ9NX55 129 aa13.67□□□□□ -0.22
SRP54-213ENST00000556994 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms