RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ZBTB1Q9Y2K1 713 aa29.64■■■□□ 2.34
PABPN1-206ENST00000556809 KDM3BQ7LBC6 1761 aa29.63■■■□□ 2.33
PABPN1-206ENST00000556809 GYS1P13807 737 aa29.63■■■□□ 2.33
PABPN1-206ENST00000556809 TMPOP42166 694 aaKnown RBP29.62■■■□□ 2.33
PABPN1-206ENST00000556809 STARD3NLO95772 234 aa29.61■■■□□ 2.33
PABPN1-206ENST00000556809 RIPK4P57078 832 aa29.61■■■□□ 2.33
PABPN1-206ENST00000556809 NLGN1Q8N2Q7 840 aa29.61■■■□□ 2.33
PABPN1-206ENST00000556809 THUMPD2Q9BTF0 503 aaKnown RBP29.61■■■□□ 2.33
PABPN1-206ENST00000556809 USP42Q9H9J4 1324 aaKnown RBP29.61■■■□□ 2.33
PABPN1-206ENST00000556809 CCER2I3L3R5 266 aa29.59■■■□□ 2.33
PABPN1-206ENST00000556809 MIS18AQ9NYP9 233 aa29.59■■■□□ 2.33
PABPN1-206ENST00000556809 SRP68Q9UHB9 627 aaKnown RBP29.59■■■□□ 2.33
PABPN1-206ENST00000556809 KLHL34Q8N239 644 aa29.58■■■□□ 2.33
PABPN1-206ENST00000556809 NLGN2Q8NFZ4 835 aa29.58■■■□□ 2.33
PABPN1-206ENST00000556809 COL15A1P39059 1388 aa29.57■■■□□ 2.32
PABPN1-206ENST00000556809 MMP10P09238 476 aa29.57■■■□□ 2.32
PABPN1-206ENST00000556809 CD2APQ9Y5K6 639 aa29.57■■■□□ 2.32
PABPN1-206ENST00000556809 PRAMEF22A3QJZ6 481 aa29.56■■■□□ 2.32
PABPN1-206ENST00000556809 CANXP27824 592 aaKnown RBP29.56■■■□□ 2.32
PABPN1-206ENST00000556809 EIF5P55010 431 aaKnown RBP29.56■■■□□ 2.32
PABPN1-206ENST00000556809 USP16Q9Y5T5 823 aa29.56■■■□□ 2.32
PABPN1-206ENST00000556809 SNRPA1P09661 255 aaKnown RBP29.55■■■□□ 2.32
PABPN1-206ENST00000556809 MIER1Q8N108 512 aa29.55■■■□□ 2.32
PABPN1-206ENST00000556809 RRP7AQ9Y3A4 280 aaKnown RBP29.55■■■□□ 2.32
PABPN1-206ENST00000556809 NARFQ9UHQ1 456 aa29.54■■■□□ 2.32
PABPN1-206ENST00000556809 FKBP8Q14318 412 aa29.53■■■□□ 2.32
PABPN1-206ENST00000556809 FAM9BQ8IZU0 186 aa29.53■■■□□ 2.32
PABPN1-206ENST00000556809 KIF13BQ9NQT8 1826 aa29.52■■■□□ 2.32
PABPN1-206ENST00000556809 APAF1O14727 1248 aa29.52■■■□□ 2.32
PABPN1-206ENST00000556809 A1BGP04217 495 aa29.52■■■□□ 2.32
PABPN1-206ENST00000556809 LMOD3Q0VAK6 560 aa29.52■■■□□ 2.32
PABPN1-206ENST00000556809 NEUROD2Q15784 382 aa29.52■■■□□ 2.32
PABPN1-206ENST00000556809 TRIM35Q9UPQ4 493 aa29.52■■■□□ 2.32
PABPN1-206ENST00000556809 DCAF8L1A6NGE4 600 aa29.51■■■□□ 2.31
PABPN1-206ENST00000556809 ZPR1O75312 459 aa29.51■■■□□ 2.31
PABPN1-206ENST00000556809 IL6STP40189 918 aaPredicted RBP29.51■■■□□ 2.31
PABPN1-206ENST00000556809 USPL1Q5W0Q7 1092 aa29.51■■■□□ 2.31
PABPN1-206ENST00000556809 LAMB4A4D0S4 1761 aa29.5■■■□□ 2.31
PABPN1-206ENST00000556809 EIF4A1P60842 406 aaKnown RBP29.5■■■□□ 2.31
PABPN1-206ENST00000556809 BCL2L12Q9HB09 334 aa29.5■■■□□ 2.31
PABPN1-206ENST00000556809 TM4SF1P30408 202 aa29.48■■■□□ 2.31
PABPN1-206ENST00000556809 A0A087WZG4 1122 aa29.47■■■□□ 2.31
PABPN1-206ENST00000556809 BABAM1Q9NWV8 329 aa29.47■■■□□ 2.31
PABPN1-206ENST00000556809 KIAA1551Q9HCM1 1747 aa29.46■■■□□ 2.31
PABPN1-206ENST00000556809 GIGYF1O75420 1035 aaPredicted RBP29.46■■■□□ 2.31
PABPN1-206ENST00000556809 DDR1Q08345 913 aa29.46■■■□□ 2.31
PABPN1-206ENST00000556809 PARP3Q9Y6F1 533 aa29.46■■■□□ 2.31
PABPN1-206ENST00000556809 C10orf71Q711Q0 1435 aa29.45■■■□□ 2.31
PABPN1-206ENST00000556809 SCN7AQ01118 1682 aa29.45■■■□□ 2.31
PABPN1-206ENST00000556809 NBPF26B4DH59 902 aa29.44■■■□□ 2.3
PABPN1-206ENST00000556809 NBPF10Q6P3W6 841 aaKnown RBP29.44■■■□□ 2.3
PABPN1-206ENST00000556809 NBPF15Q8N660 670 aa29.44■■■□□ 2.3
PABPN1-206ENST00000556809 TSPYL4Q9UJ04 414 aa29.44■■■□□ 2.3
PABPN1-206ENST00000556809 PIP4K2AP48426 406 aaPredicted RBP29.43■■■□□ 2.3
PABPN1-206ENST00000556809 UTRNP46939 3433 aa29.42■■■□□ 2.3
PABPN1-206ENST00000556809 POLRMTO00411 1230 aaKnown RBP29.42■■■□□ 2.3
PABPN1-206ENST00000556809 TBC1D2BQ9UPU7 963 aa29.42■■■□□ 2.3
PABPN1-206ENST00000556809 BCORQ6W2J9 1755 aa29.41■■■□□ 2.3
PABPN1-206ENST00000556809 AFDNP55196 1824 aaKnown RBP29.41■■■□□ 2.3
PABPN1-206ENST00000556809 NFIXQ14938 502 aa29.41■■■□□ 2.3
PABPN1-206ENST00000556809 NRXN2Q9P2S2 1712 aa29.41■■■□□ 2.3
PABPN1-206ENST00000556809 ZNF330Q9Y3S2 320 aaPredicted RBP29.41■■■□□ 2.3
PABPN1-206ENST00000556809 CHL1O00533 1208 aa29.4■■■□□ 2.3
PABPN1-206ENST00000556809 GPR162Q16538 588 aa29.4■■■□□ 2.3
PABPN1-206ENST00000556809 N4BP2Q86UW6 1770 aaPredicted RBP29.39■■■□□ 2.29
PABPN1-206ENST00000556809 PXDNLA1KZ92 1463 aa29.38■■■□□ 2.29
PABPN1-206ENST00000556809 SENP3-EIF4A1A0A087X0R7 540 aa29.38■■■□□ 2.29
PABPN1-206ENST00000556809 CAMTA2O94983 1202 aa29.38■■■□□ 2.29
PABPN1-206ENST00000556809 YBX3P16989 372 aaKnown RBP eCLIP29.38■■■□□ 2.29
PABPN1-206ENST00000556809 TGFB2P61812 414 aa29.37■■■□□ 2.29
PABPN1-206ENST00000556809 CHD4Q14839 1912 aa29.36■■■□□ 2.29
PABPN1-206ENST00000556809 DZIP3Q86Y13 1208 aaKnown RBP29.36■■■□□ 2.29
PABPN1-206ENST00000556809 GOLGB1Q14789 3259 aaKnown RBP29.36■■■□□ 2.29
PABPN1-206ENST00000556809 NCBP3Q53F19 620 aaKnown RBP29.35■■■□□ 2.29
PABPN1-206ENST00000556809 NPM2Q86SE8 214 aaKnown RBP29.35■■■□□ 2.29
PABPN1-206ENST00000556809 CCDC27Q2M243 656 aa29.34■■■□□ 2.29
PABPN1-206ENST00000556809 TBC1D9BQ66K14 1250 aa29.34■■■□□ 2.29
PABPN1-206ENST00000556809 PELP1Q8IZL8 1130 aaKnown RBP29.34■■■□□ 2.29
PABPN1-206ENST00000556809 BRCA1P38398 1863 aaKnown RBP29.33■■■□□ 2.29
PABPN1-206ENST00000556809 SERPINB2P05120 415 aa29.32■■■□□ 2.28
PABPN1-206ENST00000556809 CFAP44Q96MT7 982 aa29.32■■■□□ 2.28
PABPN1-206ENST00000556809 ZNF853P0CG23 659 aa29.31■■■□□ 2.28
PABPN1-206ENST00000556809 CALD1Q05682 793 aaKnown RBP29.31■■■□□ 2.28
PABPN1-206ENST00000556809 A0A0G2JLW4 131 aa29.3■■■□□ 2.28
PABPN1-206ENST00000556809 RGL2O15211 777 aa29.3■■■□□ 2.28
PABPN1-206ENST00000556809 CLEC4GQ6UXB4 293 aa29.3■■■□□ 2.28
PABPN1-206ENST00000556809 BICDL1Q6ZP65 573 aa29.3■■■□□ 2.28
PABPN1-206ENST00000556809 LAS1LQ9Y4W2 734 aaKnown RBP29.3■■■□□ 2.28
PABPN1-206ENST00000556809 ERBB4Q15303 1308 aa29.29■■■□□ 2.28
PABPN1-206ENST00000556809 GRIN3BO60391 1043 aa29.29■■■□□ 2.28
PABPN1-206ENST00000556809 DPEP1P16444 411 aa29.29■■■□□ 2.28
PABPN1-206ENST00000556809 KCNA3P22001 575 aa29.29■■■□□ 2.28
PABPN1-206ENST00000556809 WWC1Q8IX03 1113 aa29.29■■■□□ 2.28
PABPN1-206ENST00000556809 SALL2Q9Y467 1007 aaPredicted RBP29.29■■■□□ 2.28
PABPN1-206ENST00000556809 YY1P25490 414 aa29.28■■■□□ 2.28
PABPN1-206ENST00000556809 KRT24Q2M2I5 525 aa29.28■■■□□ 2.28
PABPN1-206ENST00000556809 NGEFQ8N5V2 710 aa29.28■■■□□ 2.28
PABPN1-206ENST00000556809 PDIA6Q15084 440 aa29.27■■■□□ 2.28
PABPN1-206ENST00000556809 LRP10Q7Z4F1 713 aa29.27■■■□□ 2.28
PABPN1-206ENST00000556809 MBIPQ9NS73 344 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms