RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
MARK3-211ENST00000556744 MPRIPQ6WCQ1 1025 aa12.78□□□□□ -0.36
MARK3-211ENST00000556744 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
MARK3-211ENST00000556744 OCEL1Q9H607 264 aa12.78□□□□□ -0.36
MARK3-211ENST00000556744 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
MARK3-211ENST00000556744 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
MARK3-211ENST00000556744 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
MARK3-211ENST00000556744 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
MARK3-211ENST00000556744 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
MARK3-211ENST00000556744 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
MARK3-211ENST00000556744 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
MARK3-211ENST00000556744 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
MARK3-211ENST00000556744 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
MARK3-211ENST00000556744 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
MARK3-211ENST00000556744 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
MARK3-211ENST00000556744 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
MARK3-211ENST00000556744 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
MARK3-211ENST00000556744 HMOX1P09601 288 aa12.75□□□□□ -0.37
MARK3-211ENST00000556744 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
MARK3-211ENST00000556744 ZNF831Q5JPB2 1677 aa12.75□□□□□ -0.37
MARK3-211ENST00000556744 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
MARK3-211ENST00000556744 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
MARK3-211ENST00000556744 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
MARK3-211ENST00000556744 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
MARK3-211ENST00000556744 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
MARK3-211ENST00000556744 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
MARK3-211ENST00000556744 G3V3G9 751 aa12.74□□□□□ -0.37
MARK3-211ENST00000556744 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
MARK3-211ENST00000556744 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
MARK3-211ENST00000556744 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
MARK3-211ENST00000556744 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
MARK3-211ENST00000556744 KCNQ4P56696 695 aa12.73□□□□□ -0.37
MARK3-211ENST00000556744 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
MARK3-211ENST00000556744 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
MARK3-211ENST00000556744 RALBP1Q15311 655 aa12.73□□□□□ -0.37
MARK3-211ENST00000556744 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
MARK3-211ENST00000556744 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
MARK3-211ENST00000556744 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
MARK3-211ENST00000556744 C5P01031 1676 aa12.73□□□□□ -0.37
MARK3-211ENST00000556744 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 LOC102724428A0A0B4J2F2 783 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 SEMA3EO15041 775 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 FCHSD2O94868 740 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 PTGER2P43116 358 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 SIK1P57059 783 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 MRC1P22897 1456 aa12.72□□□□□ -0.37
MARK3-211ENST00000556744 PNPLA7Q6ZV29 1317 aa12.71□□□□□ -0.37
MARK3-211ENST00000556744 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
MARK3-211ENST00000556744 GABBR2O75899 941 aa12.71□□□□□ -0.37
MARK3-211ENST00000556744 PLCG2P16885 1265 aa12.71□□□□□ -0.37
MARK3-211ENST00000556744 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
MARK3-211ENST00000556744 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
MARK3-211ENST00000556744 BOLA1Q9Y3E2 137 aa12.71□□□□□ -0.37
MARK3-211ENST00000556744 RNMTO43148 476 aaKnown RBP12.7□□□□□ -0.38
MARK3-211ENST00000556744 CABP4P57796 275 aa12.7□□□□□ -0.38
MARK3-211ENST00000556744 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
MARK3-211ENST00000556744 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
MARK3-211ENST00000556744 SLC4A9Q96Q91 983 aa12.7□□□□□ -0.38
MARK3-211ENST00000556744 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
MARK3-211ENST00000556744 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
MARK3-211ENST00000556744 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
MARK3-211ENST00000556744 C4BP0C0L5 1744 aa12.69□□□□□ -0.38
MARK3-211ENST00000556744 ITPK1Q13572 414 aa12.69□□□□□ -0.38
MARK3-211ENST00000556744 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
MARK3-211ENST00000556744 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
MARK3-211ENST00000556744 SLC52A2Q9HAB3 445 aa12.69□□□□□ -0.38
MARK3-211ENST00000556744 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
MARK3-211ENST00000556744 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 ZBTB7AO95365 584 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
MARK3-211ENST00000556744 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 CEMIPQ8WUJ3 1361 aa12.68□□□□□ -0.38
MARK3-211ENST00000556744 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
MARK3-211ENST00000556744 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
MARK3-211ENST00000556744 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
MARK3-211ENST00000556744 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
MARK3-211ENST00000556744 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
MARK3-211ENST00000556744 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
MARK3-211ENST00000556744 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
MARK3-211ENST00000556744 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
MARK3-211ENST00000556744 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
MARK3-211ENST00000556744 FOXK1P85037 733 aa12.66□□□□□ -0.38
MARK3-211ENST00000556744 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
MARK3-211ENST00000556744 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
MARK3-211ENST00000556744 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
MARK3-211ENST00000556744 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.38
MARK3-211ENST00000556744 HTATSF1O43719 755 aaKnown RBP12.65□□□□□ -0.38
MARK3-211ENST00000556744 SSFA2P28290 1259 aa12.65□□□□□ -0.38
MARK3-211ENST00000556744 DSG2Q14126 1118 aa12.65□□□□□ -0.38
MARK3-211ENST00000556744 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
MARK3-211ENST00000556744 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
MARK3-211ENST00000556744 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
MARK3-211ENST00000556744 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms