RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.3
APEX1-213ENST00000556296 STARD3NLO95772 234 aa16.95■□□□□ 0.3
APEX1-213ENST00000556296 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
APEX1-213ENST00000556296 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
APEX1-213ENST00000556296 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
APEX1-213ENST00000556296 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
APEX1-213ENST00000556296 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
APEX1-213ENST00000556296 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
APEX1-213ENST00000556296 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
APEX1-213ENST00000556296 A0A087WZG4 1122 aa16.94■□□□□ 0.3
APEX1-213ENST00000556296 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
APEX1-213ENST00000556296 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
APEX1-213ENST00000556296 KCNA3P22001 575 aa16.94■□□□□ 0.3
APEX1-213ENST00000556296 TM4SF1P30408 202 aa16.94■□□□□ 0.3
APEX1-213ENST00000556296 DDR1Q08345 913 aa16.94■□□□□ 0.3
APEX1-213ENST00000556296 CEP350Q5VT06 3117 aa16.94■□□□□ 0.3
APEX1-213ENST00000556296 SOS1Q07889 1333 aaPredicted RBP16.94■□□□□ 0.3
APEX1-213ENST00000556296 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
APEX1-213ENST00000556296 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
APEX1-213ENST00000556296 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
APEX1-213ENST00000556296 KCPQ6ZWJ8 1503 aa16.92■□□□□ 0.3
APEX1-213ENST00000556296 TEFQ10587 303 aa16.92■□□□□ 0.3
APEX1-213ENST00000556296 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
APEX1-213ENST00000556296 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
APEX1-213ENST00000556296 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
APEX1-213ENST00000556296 CHRNA5P30532 468 aa16.91■□□□□ 0.3
APEX1-213ENST00000556296 RBM46Q8TBY0 533 aaKnown RBP16.91■□□□□ 0.3
APEX1-213ENST00000556296 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
APEX1-213ENST00000556296 N4BP2Q86UW6 1770 aaPredicted RBP16.91■□□□□ 0.3
APEX1-213ENST00000556296 FSTL1Q12841 308 aa16.9■□□□□ 0.3
APEX1-213ENST00000556296 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
APEX1-213ENST00000556296 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
APEX1-213ENST00000556296 BRCA1P38398 1863 aaKnown RBP16.9■□□□□ 0.3
APEX1-213ENST00000556296 COL15A1P39059 1388 aa16.89■□□□□ 0.3
APEX1-213ENST00000556296 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
APEX1-213ENST00000556296 H0YIN7 160 aa16.89■□□□□ 0.29
APEX1-213ENST00000556296 SERPINB2P05120 415 aa16.89■□□□□ 0.29
APEX1-213ENST00000556296 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
APEX1-213ENST00000556296 NFIXQ14938 502 aa16.89■□□□□ 0.29
APEX1-213ENST00000556296 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
APEX1-213ENST00000556296 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
APEX1-213ENST00000556296 TTLL6Q8N841 843 aa16.88■□□□□ 0.29
APEX1-213ENST00000556296 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
APEX1-213ENST00000556296 NPHP1O15259 732 aa16.86■□□□□ 0.29
APEX1-213ENST00000556296 C2CD5Q86YS7 1000 aa16.86■□□□□ 0.29
APEX1-213ENST00000556296 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 LMNB1P20700 586 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 PDE6BP35913 854 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 EIF5P55010 431 aaKnown RBP16.85■□□□□ 0.29
APEX1-213ENST00000556296 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 MIER1Q8N108 512 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
APEX1-213ENST00000556296 BICDL1Q6ZP65 573 aa16.84■□□□□ 0.29
APEX1-213ENST00000556296 RSPH6AQ9H0K4 717 aa16.84■□□□□ 0.29
APEX1-213ENST00000556296 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
APEX1-213ENST00000556296 ZNF330Q9Y3S2 320 aaPredicted RBP16.84■□□□□ 0.29
APEX1-213ENST00000556296 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
APEX1-213ENST00000556296 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
APEX1-213ENST00000556296 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.28
APEX1-213ENST00000556296 SMC1BQ8NDV3 1235 aa16.83■□□□□ 0.28
APEX1-213ENST00000556296 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
APEX1-213ENST00000556296 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
APEX1-213ENST00000556296 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
APEX1-213ENST00000556296 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
APEX1-213ENST00000556296 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
APEX1-213ENST00000556296 BRIP1Q9BX63 1249 aa16.82■□□□□ 0.28
APEX1-213ENST00000556296 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
APEX1-213ENST00000556296 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
APEX1-213ENST00000556296 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
APEX1-213ENST00000556296 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
APEX1-213ENST00000556296 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
APEX1-213ENST00000556296 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
APEX1-213ENST00000556296 DPY19L2Q6NUT2 758 aa16.81■□□□□ 0.28
APEX1-213ENST00000556296 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
APEX1-213ENST00000556296 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
APEX1-213ENST00000556296 GLTPD2A6NH11 291 aa16.8■□□□□ 0.28
APEX1-213ENST00000556296 ST5P78524 1137 aa16.8■□□□□ 0.28
APEX1-213ENST00000556296 RASSF7Q02833 373 aa16.8■□□□□ 0.28
APEX1-213ENST00000556296 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
APEX1-213ENST00000556296 DNAJC5GQ8N7S2 189 aa16.8■□□□□ 0.28
APEX1-213ENST00000556296 CARMIL3Q8ND23 1372 aa16.79■□□□□ 0.28
APEX1-213ENST00000556296 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
APEX1-213ENST00000556296 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
APEX1-213ENST00000556296 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
APEX1-213ENST00000556296 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
APEX1-213ENST00000556296 NEFMP07197 916 aa16.78■□□□□ 0.28
APEX1-213ENST00000556296 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
APEX1-213ENST00000556296 CNBD1Q8NA66 436 aa16.78■□□□□ 0.28
APEX1-213ENST00000556296 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
APEX1-213ENST00000556296 KLRG1Q96E93 195 aa16.78■□□□□ 0.28
APEX1-213ENST00000556296 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
APEX1-213ENST00000556296 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
APEX1-213ENST00000556296 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
APEX1-213ENST00000556296 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
APEX1-213ENST00000556296 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
APEX1-213ENST00000556296 DLEC1Q9Y238 1755 aa16.75■□□□□ 0.27
APEX1-213ENST00000556296 A1BGP04217 495 aa16.75■□□□□ 0.27
APEX1-213ENST00000556296 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms