RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 TESK2Q96S53 571 aa18.62■□□□□ 0.57
ABCD4-224ENST00000556119 EYA1Q99502 592 aa18.62■□□□□ 0.57
ABCD4-224ENST00000556119 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
ABCD4-224ENST00000556119 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
ABCD4-224ENST00000556119 HSPA8P11142 646 aaKnown RBP18.6■□□□□ 0.57
ABCD4-224ENST00000556119 TTLL6Q8N841 843 aa18.6■□□□□ 0.57
ABCD4-224ENST00000556119 NRXN2Q9P2S2 1712 aa18.6■□□□□ 0.57
ABCD4-224ENST00000556119 FER1L6Q2WGJ9 1857 aa18.58■□□□□ 0.57
ABCD4-224ENST00000556119 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
ABCD4-224ENST00000556119 CCDC85CA6NKD9 419 aa18.57■□□□□ 0.56
ABCD4-224ENST00000556119 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
ABCD4-224ENST00000556119 TJP1Q07157 1748 aa18.57■□□□□ 0.56
ABCD4-224ENST00000556119 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
ABCD4-224ENST00000556119 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
ABCD4-224ENST00000556119 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
ABCD4-224ENST00000556119 TMEM88BA6NKF7 163 aa18.55■□□□□ 0.56
ABCD4-224ENST00000556119 DDNO94850 711 aaPredicted RBP18.55■□□□□ 0.56
ABCD4-224ENST00000556119 USPL1Q5W0Q7 1092 aa18.55■□□□□ 0.56
ABCD4-224ENST00000556119 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
ABCD4-224ENST00000556119 PDE4DIPQ5VU43 2346 aa18.54■□□□□ 0.56
ABCD4-224ENST00000556119 ST20-MTHFSA0A0A6YYL1 179 aa18.54■□□□□ 0.56
ABCD4-224ENST00000556119 ITGBL1O95965 494 aaPredicted RBP18.54■□□□□ 0.56
ABCD4-224ENST00000556119 NFIXQ14938 502 aa18.54■□□□□ 0.56
ABCD4-224ENST00000556119 C2CD5Q86YS7 1000 aa18.54■□□□□ 0.56
ABCD4-224ENST00000556119 ZPR1O75312 459 aa18.53■□□□□ 0.56
ABCD4-224ENST00000556119 CABP4P57796 275 aa18.53■□□□□ 0.56
ABCD4-224ENST00000556119 SCN4AP35499 1836 aa18.53■□□□□ 0.56
ABCD4-224ENST00000556119 H0YIN7 160 aa18.52■□□□□ 0.56
ABCD4-224ENST00000556119 LDHDQ86WU2 507 aa18.52■□□□□ 0.56
ABCD4-224ENST00000556119 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
ABCD4-224ENST00000556119 SERPINB2P05120 415 aa18.51■□□□□ 0.55
ABCD4-224ENST00000556119 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
ABCD4-224ENST00000556119 CARMIL3Q8ND23 1372 aa18.51■□□□□ 0.55
ABCD4-224ENST00000556119 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
ABCD4-224ENST00000556119 C21orf2O43822 256 aa18.5■□□□□ 0.55
ABCD4-224ENST00000556119 MAP2K1Q02750 393 aaPredicted RBP18.5■□□□□ 0.55
ABCD4-224ENST00000556119 DEFB115Q30KQ5 88 aa18.5■□□□□ 0.55
ABCD4-224ENST00000556119 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
ABCD4-224ENST00000556119 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-224ENST00000556119 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
ABCD4-224ENST00000556119 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-224ENST00000556119 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
ABCD4-224ENST00000556119 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
ABCD4-224ENST00000556119 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
ABCD4-224ENST00000556119 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
ABCD4-224ENST00000556119 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
ABCD4-224ENST00000556119 CARD14Q9BXL6 1004 aa18.47■□□□□ 0.55
ABCD4-224ENST00000556119 ADAMTSL1Q8N6G6 1762 aa18.46■□□□□ 0.55
ABCD4-224ENST00000556119 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
ABCD4-224ENST00000556119 ZNF622Q969S3 477 aaKnown RBP eCLIP18.46■□□□□ 0.55
ABCD4-224ENST00000556119 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
ABCD4-224ENST00000556119 LTBP3Q9NS15 1303 aa18.46■□□□□ 0.55
ABCD4-224ENST00000556119 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
ABCD4-224ENST00000556119 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
ABCD4-224ENST00000556119 SLX4Q8IY92 1834 aa18.45■□□□□ 0.54
ABCD4-224ENST00000556119 DNAJC10Q8IXB1 793 aa18.45■□□□□ 0.54
ABCD4-224ENST00000556119 TAOK3Q9H2K8 898 aa18.45■□□□□ 0.54
ABCD4-224ENST00000556119 POLKQ9UBT6 870 aa18.45■□□□□ 0.54
ABCD4-224ENST00000556119 MTHFSP49914 203 aa18.44■□□□□ 0.54
ABCD4-224ENST00000556119 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
ABCD4-224ENST00000556119 ZNF530Q6P9A1 599 aaPredicted RBP18.44■□□□□ 0.54
ABCD4-224ENST00000556119 EAPPQ56P03 285 aaPredicted RBP18.43■□□□□ 0.54
ABCD4-224ENST00000556119 CASP8AP2Q9UKL3 1982 aa18.42■□□□□ 0.54
ABCD4-224ENST00000556119 THSD7BQ9C0I4 1608 aa18.42■□□□□ 0.54
ABCD4-224ENST00000556119 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-224ENST00000556119 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
ABCD4-224ENST00000556119 SCN11AQ9UI33 1791 aa18.42■□□□□ 0.54
ABCD4-224ENST00000556119 COL15A1P39059 1388 aa18.42■□□□□ 0.54
ABCD4-224ENST00000556119 CNTROBQ8N137 903 aa18.41■□□□□ 0.54
ABCD4-224ENST00000556119 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
ABCD4-224ENST00000556119 MAP1SQ66K74 1059 aaPredicted RBP18.4■□□□□ 0.54
ABCD4-224ENST00000556119 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
ABCD4-224ENST00000556119 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
ABCD4-224ENST00000556119 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
ABCD4-224ENST00000556119 PDE6BP35913 854 aa18.39■□□□□ 0.53
ABCD4-224ENST00000556119 CCDC24Q8N4L8 307 aa18.39■□□□□ 0.53
ABCD4-224ENST00000556119 BRIP1Q9BX63 1249 aa18.39■□□□□ 0.53
ABCD4-224ENST00000556119 ABT1Q9ULW3 272 aaKnown RBP18.39■□□□□ 0.53
ABCD4-224ENST00000556119 PDZRN3Q9UPQ7 1066 aa18.39■□□□□ 0.53
ABCD4-224ENST00000556119 ARFGEF2Q9Y6D5 1785 aa18.38■□□□□ 0.53
ABCD4-224ENST00000556119 BEGAINQ9BUH8 593 aa18.38■□□□□ 0.53
ABCD4-224ENST00000556119 MCOLN1Q9GZU1 580 aa18.38■□□□□ 0.53
ABCD4-224ENST00000556119 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
ABCD4-224ENST00000556119 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
ABCD4-224ENST00000556119 EPHX2P34913 555 aa18.37■□□□□ 0.53
ABCD4-224ENST00000556119 CAPNS2Q96L46 248 aa18.37■□□□□ 0.53
ABCD4-224ENST00000556119 C1orf141Q5JVX7 400 aa18.36■□□□□ 0.53
ABCD4-224ENST00000556119 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
ABCD4-224ENST00000556119 GPR101Q96P66 508 aaPredicted RBP18.36■□□□□ 0.53
ABCD4-224ENST00000556119 ZNF541Q9H0D2 1346 aa18.36■□□□□ 0.53
ABCD4-224ENST00000556119 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
ABCD4-224ENST00000556119 TBC1D9BQ66K14 1250 aa18.35■□□□□ 0.53
ABCD4-224ENST00000556119 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
ABCD4-224ENST00000556119 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
ABCD4-224ENST00000556119 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
ABCD4-224ENST00000556119 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
ABCD4-224ENST00000556119 CYP4F22Q6NT55 531 aa18.34■□□□□ 0.53
ABCD4-224ENST00000556119 CNKSR1Q969H4 720 aa18.34■□□□□ 0.53
ABCD4-224ENST00000556119 TRPM7Q96QT4 1865 aa18.34■□□□□ 0.53
ABCD4-224ENST00000556119 GRM1Q13255 1194 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms