RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, human

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R4-204	ENST00000555690	IL17RE	Q8NFR9	667 aa		32.87	■■■□□ 2.85
PPP4R4-204	ENST00000555690	GAS2L2	Q8NHY3	880 aa		32.87	■■■□□ 2.85
PPP4R4-204	ENST00000555690	COL15A1	P39059	1388 aa		32.86	■■■□□ 2.85
PPP4R4-204	ENST00000555690	NARF	Q9UHQ1	456 aa		32.86	■■■□□ 2.85
PPP4R4-204	ENST00000555690	BRCA1	P38398	1863 aa	Known RBP	32.84	■■■□□ 2.85
PPP4R4-204	ENST00000555690	CANX	P27824	592 aa	Known RBP	32.84	■■■□□ 2.85
PPP4R4-204	ENST00000555690	CHRNA5	P30532	468 aa		32.84	■■■□□ 2.85
PPP4R4-204	ENST00000555690	TEF	Q10587	303 aa		32.84	■■■□□ 2.85
PPP4R4-204	ENST00000555690	NFIX	Q14938	502 aa		32.83	■■■□□ 2.85
PPP4R4-204	ENST00000555690	DALRD3	Q5D0E6	543 aa	Known RBP	32.83	■■■□□ 2.85
PPP4R4-204	ENST00000555690	ZNF496	Q96IT1	587 aa	Predicted RBP	32.82	■■■□□ 2.84
PPP4R4-204	ENST00000555690	KIF3C	O14782	793 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	STARD3NL	O95772	234 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	ZNF790	Q6PG37	636 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	PHACTR3	Q96KR7	559 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	CFAP53	Q96M91	514 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	BCL2L12	Q9HB09	334 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	UBR2	Q8IWV8	1755 aa		32.81	■■■□□ 2.84
PPP4R4-204	ENST00000555690	PRKAR2B	P31323	418 aa		32.79	■■■□□ 2.84
PPP4R4-204	ENST00000555690	RSPH6A	Q9H0K4	717 aa		32.77	■■■□□ 2.84
PPP4R4-204	ENST00000555690	HEG1	Q9ULI3	1381 aa		32.76	■■■□□ 2.83
PPP4R4-204	ENST00000555690	EIF5	P55010	431 aa	Known RBP	32.76	■■■□□ 2.83
PPP4R4-204	ENST00000555690	C9orf131	Q5VYM1	1079 aa		32.76	■■■□□ 2.83
PPP4R4-204	ENST00000555690	ARFGEF1	Q9Y6D6	1849 aa		32.76	■■■□□ 2.83
PPP4R4-204	ENST00000555690	SERPINB2	P05120	415 aa		32.75	■■■□□ 2.83
PPP4R4-204	ENST00000555690	HSPA6	P17066	643 aa		32.74	■■■□□ 2.83
PPP4R4-204	ENST00000555690	PPP2R1A	P30153	589 aa		32.74	■■■□□ 2.83
PPP4R4-204	ENST00000555690	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.74	■■■□□ 2.83
PPP4R4-204	ENST00000555690	NUDC	Q9Y266	331 aa		32.74	■■■□□ 2.83
PPP4R4-204	ENST00000555690	CEMIP	Q8WUJ3	1361 aa		32.73	■■■□□ 2.83
PPP4R4-204	ENST00000555690	AFDN	P55196	1824 aa	Known RBP	32.72	■■■□□ 2.83
PPP4R4-204	ENST00000555690		A0A087WZG4	1122 aa		32.72	■■■□□ 2.83
PPP4R4-204	ENST00000555690	BICDL1	Q6ZP65	573 aa		32.72	■■■□□ 2.83
PPP4R4-204	ENST00000555690	KCNQ3	O43525	872 aa		32.71	■■■□□ 2.83
PPP4R4-204	ENST00000555690	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.71	■■■□□ 2.83
PPP4R4-204	ENST00000555690	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
PPP4R4-204	ENST00000555690	FMNL2	Q96PY5	1086 aa		32.71	■■■□□ 2.83
PPP4R4-204	ENST00000555690	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.71	■■■□□ 2.83
PPP4R4-204	ENST00000555690	SIPA1L3	O60292	1781 aa	Predicted RBP	32.7	■■■□□ 2.83
PPP4R4-204	ENST00000555690	BTBD11	A6QL63	1104 aa		32.7	■■■□□ 2.83
PPP4R4-204	ENST00000555690	NMRK2	Q9NPI5	230 aa		32.69	■■■□□ 2.82
PPP4R4-204	ENST00000555690	TBC1D2B	Q9UPU7	963 aa		32.68	■■■□□ 2.82
PPP4R4-204	ENST00000555690	NRXN2	Q9P2S2	1712 aa		32.68	■■■□□ 2.82
PPP4R4-204	ENST00000555690	A1BG	P04217	495 aa		32.67	■■■□□ 2.82
PPP4R4-204	ENST00000555690	RNF181	Q9P0P0	153 aa		32.67	■■■□□ 2.82
PPP4R4-204	ENST00000555690	IL6ST	P40189	918 aa	Predicted RBP	32.66	■■■□□ 2.82
PPP4R4-204	ENST00000555690	TBC1D9B	Q66K14	1250 aa		32.66	■■■□□ 2.82
PPP4R4-204	ENST00000555690	TOMM70	O94826	608 aa		32.64	■■■□□ 2.82
PPP4R4-204	ENST00000555690	MCM10	Q7L590	875 aa		32.64	■■■□□ 2.82
PPP4R4-204	ENST00000555690	C2CD5	Q86YS7	1000 aa		32.64	■■■□□ 2.82
PPP4R4-204	ENST00000555690	CARMIL3	Q8ND23	1372 aa		32.64	■■■□□ 2.82
PPP4R4-204	ENST00000555690	RTF1	Q92541	710 aa	Known RBP	32.63	■■■□□ 2.81
PPP4R4-204	ENST00000555690	TTLL6	Q8N841	843 aa		32.62	■■■□□ 2.81
PPP4R4-204	ENST00000555690		H0YIN7	160 aa		32.61	■■■□□ 2.81
PPP4R4-204	ENST00000555690	NPM2	Q86SE8	214 aa	Known RBP	32.61	■■■□□ 2.81
PPP4R4-204	ENST00000555690	USP16	Q9Y5T5	823 aa		32.61	■■■□□ 2.81
PPP4R4-204	ENST00000555690	RASSF7	Q02833	373 aa		32.6	■■■□□ 2.81
PPP4R4-204	ENST00000555690	DCTN1	Q14203	1278 aa		32.59	■■■□□ 2.81
PPP4R4-204	ENST00000555690	PRAMEF22	A3QJZ6	481 aa		32.58	■■■□□ 2.81
PPP4R4-204	ENST00000555690	CCDC24	Q8N4L8	307 aa		32.58	■■■□□ 2.81
PPP4R4-204	ENST00000555690	SBF1	O95248	1867 aa		32.57	■■■□□ 2.8
PPP4R4-204	ENST00000555690	CAMTA2	O94983	1202 aa		32.57	■■■□□ 2.8
PPP4R4-204	ENST00000555690	PIP4K2A	P48426	406 aa	Predicted RBP	32.57	■■■□□ 2.8
PPP4R4-204	ENST00000555690	KDM2B	Q8NHM5	1336 aa		32.56	■■■□□ 2.8
PPP4R4-204	ENST00000555690	PRR5L	Q6MZQ0	368 aa		32.56	■■■□□ 2.8
PPP4R4-204	ENST00000555690	SCN7A	Q01118	1682 aa		32.56	■■■□□ 2.8
PPP4R4-204	ENST00000555690	BRIP1	Q9BX63	1249 aa		32.55	■■■□□ 2.8
PPP4R4-204	ENST00000555690	DLEC1	Q9Y238	1755 aa		32.55	■■■□□ 2.8
PPP4R4-204	ENST00000555690	SNRPA1	P09661	255 aa	Known RBP	32.54	■■■□□ 2.8
PPP4R4-204	ENST00000555690	DZIP3	Q86Y13	1208 aa	Known RBP	32.54	■■■□□ 2.8
PPP4R4-204	ENST00000555690	SETDB2	Q96T68	719 aa		32.54	■■■□□ 2.8
PPP4R4-204	ENST00000555690	HTATSF1	O43719	755 aa	Known RBP	32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	LMNB1	P20700	586 aa		32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	PDE6B	P35913	854 aa		32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	PRELP	P51888	382 aa		32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	RRAGC	Q9HB90	399 aa		32.53	■■■□□ 2.8
PPP4R4-204	ENST00000555690	APLP1	P51693	650 aa		32.51	■■■□□ 2.79
PPP4R4-204	ENST00000555690	RBM46	Q8TBY0	533 aa	Known RBP	32.51	■■■□□ 2.79
PPP4R4-204	ENST00000555690	CNBD1	Q8NA66	436 aa		32.5	■■■□□ 2.79
PPP4R4-204	ENST00000555690	PDZRN3	Q9UPQ7	1066 aa		32.5	■■■□□ 2.79
PPP4R4-204	ENST00000555690	ANKRD31	Q8N7Z5	1873 aa		32.5	■■■□□ 2.79
PPP4R4-204	ENST00000555690	NPHP1	O15259	732 aa		32.49	■■■□□ 2.79
PPP4R4-204	ENST00000555690	NFKBIE	O00221	500 aa		32.48	■■■□□ 2.79
PPP4R4-204	ENST00000555690	TAF7	Q15545	349 aa	Predicted RBP	32.48	■■■□□ 2.79
PPP4R4-204	ENST00000555690	MIS18A	Q9NYP9	233 aa		32.48	■■■□□ 2.79
PPP4R4-204	ENST00000555690	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.48	■■■□□ 2.79
PPP4R4-204	ENST00000555690	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.47	■■■□□ 2.79
PPP4R4-204	ENST00000555690	NBPF26	B4DH59	902 aa		32.45	■■■□□ 2.79
PPP4R4-204	ENST00000555690	C21orf2	O43822	256 aa		32.45	■■■□□ 2.79
PPP4R4-204	ENST00000555690	ST5	P78524	1137 aa		32.45	■■■□□ 2.79
PPP4R4-204	ENST00000555690	NBPF10	Q6P3W6	841 aa	Known RBP	32.45	■■■□□ 2.79
PPP4R4-204	ENST00000555690	NBPF15	Q8N660	670 aa		32.45	■■■□□ 2.79
PPP4R4-204	ENST00000555690	NEFM	P07197	916 aa		32.44	■■■□□ 2.78
PPP4R4-204	ENST00000555690	CLEC4G	Q6UXB4	293 aa		32.44	■■■□□ 2.78
PPP4R4-204	ENST00000555690	BCOR	Q6W2J9	1755 aa		32.43	■■■□□ 2.78
PPP4R4-204	ENST00000555690	GLTPD2	A6NH11	291 aa		32.42	■■■□□ 2.78
PPP4R4-204	ENST00000555690	ZNF652	Q9Y2D9	606 aa		32.42	■■■□□ 2.78
PPP4R4-204	ENST00000555690	COL11A2	P13942	1736 aa	Predicted RBP	32.42	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms