RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 STARD3NLO95772 234 aa12.71□□□□□ -0.37
ACTN1-215ENST00000555616 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
ACTN1-215ENST00000555616 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.37
ACTN1-215ENST00000555616 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
ACTN1-215ENST00000555616 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
ACTN1-215ENST00000555616 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
ACTN1-215ENST00000555616 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-215ENST00000555616 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
ACTN1-215ENST00000555616 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
ACTN1-215ENST00000555616 UTRNP46939 3433 aa12.69□□□□□ -0.38
ACTN1-215ENST00000555616 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
ACTN1-215ENST00000555616 KCNQ3O43525 872 aa12.69□□□□□ -0.38
ACTN1-215ENST00000555616 CCDC184Q52MB2 194 aa12.69□□□□□ -0.38
ACTN1-215ENST00000555616 PXDNLA1KZ92 1463 aa12.69□□□□□ -0.38
ACTN1-215ENST00000555616 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
ACTN1-215ENST00000555616 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
ACTN1-215ENST00000555616 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
ACTN1-215ENST00000555616 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
ACTN1-215ENST00000555616 FKBP8Q14318 412 aa12.68□□□□□ -0.38
ACTN1-215ENST00000555616 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
ACTN1-215ENST00000555616 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
ACTN1-215ENST00000555616 LAMB4A4D0S4 1761 aa12.67□□□□□ -0.38
ACTN1-215ENST00000555616 CHD4Q14839 1912 aa12.67□□□□□ -0.38
ACTN1-215ENST00000555616 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.383e-6■■■■□ 24.3
ACTN1-215ENST00000555616 DDR1Q08345 913 aa12.67□□□□□ -0.38
ACTN1-215ENST00000555616 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-215ENST00000555616 GPR162Q16538 588 aa12.67□□□□□ -0.38
ACTN1-215ENST00000555616 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
ACTN1-215ENST00000555616 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
ACTN1-215ENST00000555616 ZPR1O75312 459 aa12.66□□□□□ -0.38
ACTN1-215ENST00000555616 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
ACTN1-215ENST00000555616 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-215ENST00000555616 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
ACTN1-215ENST00000555616 A0A087WZG4 1122 aa12.65□□□□□ -0.38
ACTN1-215ENST00000555616 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
ACTN1-215ENST00000555616 TM4SF1P30408 202 aa12.65□□□□□ -0.38
ACTN1-215ENST00000555616 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
ACTN1-215ENST00000555616 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.38
ACTN1-215ENST00000555616 THUMPD2Q9BTF0 503 aaKnown RBP12.65□□□□□ -0.38
ACTN1-215ENST00000555616 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
ACTN1-215ENST00000555616 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
ACTN1-215ENST00000555616 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
ACTN1-215ENST00000555616 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
ACTN1-215ENST00000555616 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
ACTN1-215ENST00000555616 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
ACTN1-215ENST00000555616 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
ACTN1-215ENST00000555616 TGFB2P61812 414 aa12.64□□□□□ -0.39
ACTN1-215ENST00000555616 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
ACTN1-215ENST00000555616 ZNF784Q8NCA9 323 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-215ENST00000555616 A1BGP04217 495 aa12.63□□□□□ -0.39
ACTN1-215ENST00000555616 RIPK4P57078 832 aa12.63□□□□□ -0.39
ACTN1-215ENST00000555616 NFIXQ14938 502 aa12.63□□□□□ -0.39
ACTN1-215ENST00000555616 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
ACTN1-215ENST00000555616 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
ACTN1-215ENST00000555616 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
ACTN1-215ENST00000555616 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
ACTN1-215ENST00000555616 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
ACTN1-215ENST00000555616 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
ACTN1-215ENST00000555616 CAMTA2O94983 1202 aa12.61□□□□□ -0.39
ACTN1-215ENST00000555616 EIF4A1P60842 406 aaKnown RBP12.61□□□□□ -0.39
ACTN1-215ENST00000555616 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
ACTN1-215ENST00000555616 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
ACTN1-215ENST00000555616 BABAM1Q9NWV8 329 aa12.61□□□□□ -0.39
ACTN1-215ENST00000555616 CARMIL3Q8ND23 1372 aa12.6□□□□□ -0.39
ACTN1-215ENST00000555616 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
ACTN1-215ENST00000555616 RGL2O15211 777 aa12.6□□□□□ -0.39
ACTN1-215ENST00000555616 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-215ENST00000555616 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
ACTN1-215ENST00000555616 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
ACTN1-215ENST00000555616 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
ACTN1-215ENST00000555616 ZNF330Q9Y3S2 320 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-215ENST00000555616 N4BP2Q86UW6 1770 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-215ENST00000555616 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
ACTN1-215ENST00000555616 DPEP1P16444 411 aa12.59□□□□□ -0.39
ACTN1-215ENST00000555616 KCNA3P22001 575 aa12.59□□□□□ -0.39
ACTN1-215ENST00000555616 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-215ENST00000555616 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
ACTN1-215ENST00000555616 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
ACTN1-215ENST00000555616 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
ACTN1-215ENST00000555616 ADCY9O60503 1353 aa12.58□□□□□ -0.4
ACTN1-215ENST00000555616 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
ACTN1-215ENST00000555616 SERPINB2P05120 415 aa12.58□□□□□ -0.4
ACTN1-215ENST00000555616 TBC1D9BQ66K14 1250 aa12.58□□□□□ -0.4
ACTN1-215ENST00000555616 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
ACTN1-215ENST00000555616 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
ACTN1-215ENST00000555616 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
ACTN1-215ENST00000555616 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
ACTN1-215ENST00000555616 CHL1O00533 1208 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 CHRNA5P30532 468 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
ACTN1-215ENST00000555616 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.43e-7■■□□□ 13
ACTN1-215ENST00000555616 PRR5LQ6MZQ0 368 aa12.55□□□□□ -0.4
ACTN1-215ENST00000555616 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
ACTN1-215ENST00000555616 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
ACTN1-215ENST00000555616 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
ACTN1-215ENST00000555616 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms