RNA–Protein interactions for RNA: ENST00000555359.1

NSFL1C-211, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-211ENST00000555359 VSIG10Q8N0Z9 540 aa28.25■■■□□ 2.11
NSFL1C-211ENST00000555359 GAS2L2Q8NHY3 880 aa28.25■■■□□ 2.11
NSFL1C-211ENST00000555359 VIRMAQ69YN4 1812 aaKnown RBP28.25■■■□□ 2.11
NSFL1C-211ENST00000555359 TEFQ10587 303 aa28.24■■■□□ 2.11
NSFL1C-211ENST00000555359 DALRD3Q5D0E6 543 aaKnown RBP28.24■■■□□ 2.11
NSFL1C-211ENST00000555359 PHACTR3Q96KR7 559 aa28.24■■■□□ 2.11
NSFL1C-211ENST00000555359 NFIXQ14938 502 aa28.23■■■□□ 2.11
NSFL1C-211ENST00000555359 COL15A1P39059 1388 aa28.23■■■□□ 2.11
NSFL1C-211ENST00000555359 ADAMTS7Q9UKP4 1686 aa28.23■■■□□ 2.11
NSFL1C-211ENST00000555359 KIF3CO14782 793 aa28.22■■■□□ 2.11
NSFL1C-211ENST00000555359 ZNF496Q96IT1 587 aaPredicted RBP28.22■■■□□ 2.11
NSFL1C-211ENST00000555359 BCL2L12Q9HB09 334 aa28.22■■■□□ 2.11
NSFL1C-211ENST00000555359 STARD3NLO95772 234 aa28.21■■■□□ 2.11
NSFL1C-211ENST00000555359 CFAP53Q96M91 514 aa28.21■■■□□ 2.11
NSFL1C-211ENST00000555359 PRKAR2BP31323 418 aa28.2■■■□□ 2.1
NSFL1C-211ENST00000555359 ZNF790Q6PG37 636 aa28.2■■■□□ 2.1
NSFL1C-211ENST00000555359 CEP350Q5VT06 3117 aa28.2■■■□□ 2.1
NSFL1C-211ENST00000555359 C9orf131Q5VYM1 1079 aa28.19■■■□□ 2.1
NSFL1C-211ENST00000555359 BICDL1Q6ZP65 573 aa28.19■■■□□ 2.1
NSFL1C-211ENST00000555359 SERPINB2P05120 415 aa28.18■■■□□ 2.1
NSFL1C-211ENST00000555359 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
NSFL1C-211ENST00000555359 RSPH6AQ9H0K4 717 aa28.17■■■□□ 2.1
NSFL1C-211ENST00000555359 ZNF330Q9Y3S2 320 aaPredicted RBP28.17■■■□□ 2.1
NSFL1C-211ENST00000555359 BRCA1P38398 1863 aaKnown RBP28.17■■■□□ 2.1
NSFL1C-211ENST00000555359 KCNQ3O43525 872 aa28.16■■■□□ 2.1
NSFL1C-211ENST00000555359 NUDCQ9Y266 331 aa28.16■■■□□ 2.1
NSFL1C-211ENST00000555359 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
NSFL1C-211ENST00000555359 HSPA6P17066 643 aa28.15■■■□□ 2.1
NSFL1C-211ENST00000555359 PPP2R1AP30153 589 aa28.15■■■□□ 2.1
NSFL1C-211ENST00000555359 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
NSFL1C-211ENST00000555359 HEG1Q9ULI3 1381 aa28.14■■■□□ 2.1
NSFL1C-211ENST00000555359 NMRK2Q9NPI5 230 aa28.14■■■□□ 2.1
NSFL1C-211ENST00000555359 TBC1D2BQ9UPU7 963 aa28.14■■■□□ 2.1
NSFL1C-211ENST00000555359 A0A087WZG4 1122 aa28.13■■■□□ 2.09
NSFL1C-211ENST00000555359 BTBD11A6QL63 1104 aa28.13■■■□□ 2.09
NSFL1C-211ENST00000555359 A1BGP04217 495 aa28.13■■■□□ 2.09
NSFL1C-211ENST00000555359 FMNL2Q96PY5 1086 aa28.13■■■□□ 2.09
NSFL1C-211ENST00000555359 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
NSFL1C-211ENST00000555359 UBR2Q8IWV8 1755 aa28.11■■■□□ 2.09
NSFL1C-211ENST00000555359 RNF181Q9P0P0 153 aa28.11■■■□□ 2.09
NSFL1C-211ENST00000555359 TBC1D9BQ66K14 1250 aa28.1■■■□□ 2.09
NSFL1C-211ENST00000555359 AFDNP55196 1824 aaKnown RBP28.09■■■□□ 2.09
NSFL1C-211ENST00000555359 ARFGEF1Q9Y6D6 1849 aa28.09■■■□□ 2.09
NSFL1C-211ENST00000555359 MCM10Q7L590 875 aa28.09■■■□□ 2.09
NSFL1C-211ENST00000555359 C2CD5Q86YS7 1000 aa28.09■■■□□ 2.09
NSFL1C-211ENST00000555359 CCDC24Q8N4L8 307 aa28.09■■■□□ 2.09
NSFL1C-211ENST00000555359 CEMIPQ8WUJ3 1361 aa28.09■■■□□ 2.09
NSFL1C-211ENST00000555359 IL6STP40189 918 aaPredicted RBP28.07■■■□□ 2.08
NSFL1C-211ENST00000555359 USP16Q9Y5T5 823 aa28.07■■■□□ 2.08
NSFL1C-211ENST00000555359 H0YIN7 160 aa28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 TOMM70O94826 608 aa28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 PIP4K2AP48426 406 aaPredicted RBP28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 RASSF7Q02833 373 aa28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 DCTN1Q14203 1278 aa28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 RTF1Q92541 710 aaKnown RBP28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 CARMIL3Q8ND23 1372 aa28.06■■■□□ 2.08
NSFL1C-211ENST00000555359 PRAMEF22A3QJZ6 481 aa28.05■■■□□ 2.08
NSFL1C-211ENST00000555359 NPM2Q86SE8 214 aaKnown RBP28.05■■■□□ 2.08
NSFL1C-211ENST00000555359 TTLL6Q8N841 843 aa28.05■■■□□ 2.08
NSFL1C-211ENST00000555359 SIPA1L3O60292 1781 aaPredicted RBP28.04■■■□□ 2.08
NSFL1C-211ENST00000555359 NRXN2Q9P2S2 1712 aa28.02■■■□□ 2.08
NSFL1C-211ENST00000555359 ZNF622Q969S3 477 aaKnown RBP eCLIP28.02■■■□□ 2.084e-7■□□□□ 11.2
NSFL1C-211ENST00000555359 RRAGCQ9HB90 399 aa28.02■■■□□ 2.08
NSFL1C-211ENST00000555359 CAMTA2O94983 1202 aa28.01■■■□□ 2.07
NSFL1C-211ENST00000555359 PRR5LQ6MZQ0 368 aa28■■■□□ 2.07
NSFL1C-211ENST00000555359 DZIP3Q86Y13 1208 aaKnown RBP28■■■□□ 2.07
NSFL1C-211ENST00000555359 C16orf71Q8IYS4 520 aaPredicted RBP28■■■□□ 2.07
NSFL1C-211ENST00000555359 ZNF219Q9P2Y4 722 aaPredicted RBP28■■■□□ 2.07
NSFL1C-211ENST00000555359 KDM2BQ8NHM5 1336 aa27.99■■■□□ 2.07
NSFL1C-211ENST00000555359 PRELPP51888 382 aa27.99■■■□□ 2.07
NSFL1C-211ENST00000555359 SETDB2Q96T68 719 aa27.99■■■□□ 2.07
NSFL1C-211ENST00000555359 SNRPA1P09661 255 aaKnown RBP27.98■■■□□ 2.07
NSFL1C-211ENST00000555359 BRIP1Q9BX63 1249 aa27.98■■■□□ 2.07
NSFL1C-211ENST00000555359 MIS18AQ9NYP9 233 aa27.98■■■□□ 2.07
NSFL1C-211ENST00000555359 NPHP1O15259 732 aa27.97■■■□□ 2.07
NSFL1C-211ENST00000555359 PDE6BP35913 854 aa27.97■■■□□ 2.07
NSFL1C-211ENST00000555359 SBF1O95248 1867 aa27.97■■■□□ 2.07
NSFL1C-211ENST00000555359 LMNB1P20700 586 aa27.96■■■□□ 2.07
NSFL1C-211ENST00000555359 HTATSF1O43719 755 aaKnown RBP27.95■■■□□ 2.06
NSFL1C-211ENST00000555359 APLP1P51693 650 aa27.95■■■□□ 2.06
NSFL1C-211ENST00000555359 C21orf2O43822 256 aa27.94■■■□□ 2.06
NSFL1C-211ENST00000555359 TAF7Q15545 349 aaPredicted RBP27.94■■■□□ 2.06
NSFL1C-211ENST00000555359 RBM46Q8TBY0 533 aaKnown RBP27.94■■■□□ 2.06
NSFL1C-211ENST00000555359 CNBD1Q8NA66 436 aa27.93■■■□□ 2.06
NSFL1C-211ENST00000555359 NBPF26B4DH59 902 aa27.92■■■□□ 2.06
NSFL1C-211ENST00000555359 NFKBIEO00221 500 aa27.92■■■□□ 2.06
NSFL1C-211ENST00000555359 NBPF10Q6P3W6 841 aaKnown RBP27.92■■■□□ 2.06
NSFL1C-211ENST00000555359 NBPF15Q8N660 670 aa27.92■■■□□ 2.06
NSFL1C-211ENST00000555359 PDZRN3Q9UPQ7 1066 aa27.91■■■□□ 2.06
NSFL1C-211ENST00000555359 SCN7AQ01118 1682 aa27.91■■■□□ 2.06
NSFL1C-211ENST00000555359 ANKRD31Q8N7Z5 1873 aa27.9■■■□□ 2.06
NSFL1C-211ENST00000555359 ST5P78524 1137 aa27.9■■■□□ 2.06
NSFL1C-211ENST00000555359 DLEC1Q9Y238 1755 aa27.9■■■□□ 2.06
NSFL1C-211ENST00000555359 NEFMP07197 916 aa27.89■■■□□ 2.06
NSFL1C-211ENST00000555359 HTRA3P83110 453 aa27.88■■■□□ 2.05
NSFL1C-211ENST00000555359 NBPF5PQ86XG9 351 aaPredicted RBP27.88■■■□□ 2.05
NSFL1C-211ENST00000555359 GLTPD2A6NH11 291 aa27.87■■■□□ 2.05
NSFL1C-211ENST00000555359 FAM177BA6PVY3 158 aa27.87■■■□□ 2.05
NSFL1C-211ENST00000555359 CLEC4GQ6UXB4 293 aa27.87■■■□□ 2.05
NSFL1C-211ENST00000555359 DNAJC5GQ8N7S2 189 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms