RNA–Protein interactions for RNA: ENST00000554894.5

LINC01578-204, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-204ENST00000554894 YBX3P16989 372 aaKnown RBP eCLIP37.53■■■■□ 3.6
LINC01578-204ENST00000554894 FMNL2Q96PY5 1086 aa37.53■■■■□ 3.6
LINC01578-204ENST00000554894 KIAA1551Q9HCM1 1747 aa37.53■■■■□ 3.6
LINC01578-204ENST00000554894 STARD3NLO95772 234 aa37.51■■■■□ 3.6
LINC01578-204ENST00000554894 FKBP8Q14318 412 aa37.51■■■■□ 3.6
LINC01578-204ENST00000554894 C10orf71Q711Q0 1435 aa37.51■■■■□ 3.59
LINC01578-204ENST00000554894 GOLGB1Q14789 3259 aaKnown RBP37.5■■■■□ 3.59
LINC01578-204ENST00000554894 CANXP27824 592 aaKnown RBP37.49■■■■□ 3.59
LINC01578-204ENST00000554894 PARP3Q9Y6F1 533 aa37.49■■■■□ 3.59
LINC01578-204ENST00000554894 N4BP2Q86UW6 1770 aaPredicted RBP37.48■■■■□ 3.59
LINC01578-204ENST00000554894 MAPK8IP3Q9UPT6 1336 aa37.48■■■■□ 3.59
LINC01578-204ENST00000554894 ZPR1O75312 459 aa37.48■■■■□ 3.59
LINC01578-204ENST00000554894 USPL1Q5W0Q7 1092 aa37.48■■■■□ 3.59
LINC01578-204ENST00000554894 TEX13AQ9BXU3 409 aaPredicted RBP37.48■■■■□ 3.59
LINC01578-204ENST00000554894 PNNQ9H307 717 aaKnown RBP37.48■■■■□ 3.59
LINC01578-204ENST00000554894 NFE2L2Q16236 605 aa37.47■■■■□ 3.59
LINC01578-204ENST00000554894 PXDNLA1KZ92 1463 aa37.45■■■■□ 3.59
LINC01578-204ENST00000554894 WWC3Q9ULE0 1092 aa37.45■■■■□ 3.59
LINC01578-204ENST00000554894 NARFQ9UHQ1 456 aa37.44■■■■□ 3.58
LINC01578-204ENST00000554894 KDM3BQ7LBC6 1761 aa37.44■■■■□ 3.58
LINC01578-204ENST00000554894 DDR1Q08345 913 aa37.43■■■■□ 3.58
LINC01578-204ENST00000554894 SCN7AQ01118 1682 aa37.43■■■■□ 3.58
LINC01578-204ENST00000554894 GRIN3BO60391 1043 aa37.42■■■■□ 3.58
LINC01578-204ENST00000554894 EIF5P55010 431 aaKnown RBP37.41■■■■□ 3.58
LINC01578-204ENST00000554894 TAF7Q15545 349 aaPredicted RBP37.4■■■■□ 3.58
LINC01578-204ENST00000554894 PRKRIP1Q9H875 184 aaPredicted RBP37.4■■■■□ 3.58
LINC01578-204ENST00000554894 LAMB4A4D0S4 1761 aa37.38■■■■□ 3.57
LINC01578-204ENST00000554894 PRAMEF22A3QJZ6 481 aa37.38■■■■□ 3.57
LINC01578-204ENST00000554894 ZNF330Q9Y3S2 320 aaPredicted RBP37.38■■■■□ 3.57
LINC01578-204ENST00000554894 AFDNP55196 1824 aaKnown RBP37.38■■■■□ 3.57
LINC01578-204ENST00000554894 POLRMTO00411 1230 aaKnown RBP37.37■■■■□ 3.57
LINC01578-204ENST00000554894 A1BGP04217 495 aa37.37■■■■□ 3.57
LINC01578-204ENST00000554894 TM4SF1P30408 202 aa37.37■■■■□ 3.57
LINC01578-204ENST00000554894 TGFB2P61812 414 aa37.37■■■■□ 3.57
LINC01578-204ENST00000554894 THUMPD2Q9BTF0 503 aaKnown RBP37.37■■■■□ 3.57
LINC01578-204ENST00000554894 BCL2L12Q9HB09 334 aa37.37■■■■□ 3.57
LINC01578-204ENST00000554894 MIS18AQ9NYP9 233 aa37.37■■■■□ 3.57
LINC01578-204ENST00000554894 USP16Q9Y5T5 823 aa37.37■■■■□ 3.57
LINC01578-204ENST00000554894 A0A087WZG4 1122 aa37.36■■■■□ 3.57
LINC01578-204ENST00000554894 BRCA1P38398 1863 aaKnown RBP37.35■■■■□ 3.57
LINC01578-204ENST00000554894 IL6STP40189 918 aaPredicted RBP37.35■■■■□ 3.57
LINC01578-204ENST00000554894 NRXN2Q9P2S2 1712 aa37.35■■■■□ 3.57
LINC01578-204ENST00000554894 SNRPA1P09661 255 aaKnown RBP37.34■■■■□ 3.57
LINC01578-204ENST00000554894 BCORQ6W2J9 1755 aa37.34■■■■□ 3.57
LINC01578-204ENST00000554894 A0A0G2JLW4 131 aa37.33■■■■□ 3.57
LINC01578-204ENST00000554894 NFIXQ14938 502 aa37.33■■■■□ 3.57
LINC01578-204ENST00000554894 PIP4K2AP48426 406 aaPredicted RBP37.31■■■■□ 3.56
LINC01578-204ENST00000554894 WDR43Q15061 677 aaKnown RBP eCLIP37.31■■■■□ 3.56
LINC01578-204ENST00000554894 ZNF784Q8NCA9 323 aaPredicted RBP37.31■■■■□ 3.56
LINC01578-204ENST00000554894 PNISRQ8TF01 805 aaKnown RBP37.31■■■■□ 3.56
LINC01578-204ENST00000554894 DPEP1P16444 411 aa37.3■■■■□ 3.56
LINC01578-204ENST00000554894 CCDC146Q8IYE0 955 aa37.3■■■■□ 3.56
LINC01578-204ENST00000554894 TBC1D2BQ9UPU7 963 aa37.3■■■■□ 3.56
LINC01578-204ENST00000554894 RIPK4P57078 832 aa37.29■■■■□ 3.56
LINC01578-204ENST00000554894 TMPOP42166 694 aaKnown RBP37.27■■■■□ 3.56
LINC01578-204ENST00000554894 NPM2Q86SE8 214 aaKnown RBP37.27■■■■□ 3.56
LINC01578-204ENST00000554894 BICDL1Q6ZP65 573 aa37.25■■■■□ 3.55
LINC01578-204ENST00000554894 BCS1LQ9Y276 419 aa37.24■■■■□ 3.55
LINC01578-204ENST00000554894 RRP7AQ9Y3A4 280 aaKnown RBP37.24■■■■□ 3.55
LINC01578-204ENST00000554894 SERPINB2P05120 415 aa37.23■■■■□ 3.55
LINC01578-204ENST00000554894 TBC1D9BQ66K14 1250 aa37.23■■■■□ 3.55
LINC01578-204ENST00000554894 CAMTA2O94983 1202 aa37.22■■■■□ 3.55
LINC01578-204ENST00000554894 KCNA3P22001 575 aa37.22■■■■□ 3.55
LINC01578-204ENST00000554894 DZIP3Q86Y13 1208 aaKnown RBP37.22■■■■□ 3.55
LINC01578-204ENST00000554894 RUNDC1Q96C34 613 aa37.22■■■■□ 3.55
LINC01578-204ENST00000554894 ADAMTS8Q9UP79 889 aa37.22■■■■□ 3.55
LINC01578-204ENST00000554894 EIF4A1P60842 406 aaKnown RBP37.21■■■■□ 3.55
LINC01578-204ENST00000554894 LMOD3Q0VAK6 560 aa37.21■■■■□ 3.55
LINC01578-204ENST00000554894 ARFGEF1Q9Y6D6 1849 aa37.21■■■■□ 3.55
LINC01578-204ENST00000554894 NBPF26B4DH59 902 aa37.2■■■■□ 3.55
LINC01578-204ENST00000554894 NBPF10Q6P3W6 841 aaKnown RBP37.2■■■■□ 3.55
LINC01578-204ENST00000554894 NBPF15Q8N660 670 aa37.2■■■■□ 3.55
LINC01578-204ENST00000554894 CHRNA5P30532 468 aa37.19■■■■□ 3.54
LINC01578-204ENST00000554894 NEUROD2Q15784 382 aa37.19■■■■□ 3.54
LINC01578-204ENST00000554894 GIGYF1O75420 1035 aaPredicted RBP37.18■■■■□ 3.54
LINC01578-204ENST00000554894 TSPYL4Q9UJ04 414 aa37.18■■■■□ 3.54
LINC01578-204ENST00000554894 DLEC1Q9Y238 1755 aa37.18■■■■□ 3.54
LINC01578-204ENST00000554894 CARMIL3Q8ND23 1372 aa37.17■■■■□ 3.54
LINC01578-204ENST00000554894 ZNF316A6NFI3 1004 aaPredicted RBP37.16■■■■□ 3.54
LINC01578-204ENST00000554894 PIM2Q9P1W9 311 aa37.15■■■■□ 3.54
LINC01578-204ENST00000554894 ANKRD31Q8N7Z5 1873 aa37.15■■■■□ 3.54
LINC01578-204ENST00000554894 ADCY9O60503 1353 aa37.11■■■■□ 3.53
LINC01578-204ENST00000554894 TRIM35Q9UPQ4 493 aa37.1■■■■□ 3.53
LINC01578-204ENST00000554894 DALRD3Q5D0E6 543 aaKnown RBP37.09■■■■□ 3.53
LINC01578-204ENST00000554894 SETDB2Q96T68 719 aa37.09■■■■□ 3.53
LINC01578-204ENST00000554894 ATP10DQ9P241 1426 aa37.09■■■■□ 3.53
LINC01578-204ENST00000554894 PRR5LQ6MZQ0 368 aa37.08■■■■□ 3.53
LINC01578-204ENST00000554894 BABAM1Q9NWV8 329 aa37.08■■■■□ 3.53
LINC01578-204ENST00000554894 COL11A2P13942 1736 aaPredicted RBP37.07■■■■□ 3.53
LINC01578-204ENST00000554894 ZNF652Q9Y2D9 606 aa37.07■■■■□ 3.52
LINC01578-204ENST00000554894 CLEC4GQ6UXB4 293 aa37.06■■■■□ 3.52
LINC01578-204ENST00000554894 ARHGAP27Q6ZUM4 889 aa37.06■■■■□ 3.52
LINC01578-204ENST00000554894 CCDC24Q8N4L8 307 aa37.06■■■■□ 3.52
LINC01578-204ENST00000554894 NGEFQ8N5V2 710 aa37.05■■■■□ 3.52
LINC01578-204ENST00000554894 C2CD5Q86YS7 1000 aa37.04■■■■□ 3.52
LINC01578-204ENST00000554894 CNBD1Q8NA66 436 aa37.03■■■■□ 3.52
LINC01578-204ENST00000554894 MYL6BP14649 208 aa37.02■■■■□ 3.52
LINC01578-204ENST00000554894 CCDC184Q52MB2 194 aa37.02■■■■□ 3.52
LINC01578-204ENST00000554894 NPHP1O15259 732 aa37.01■■■■□ 3.52
LINC01578-204ENST00000554894 LAS1LQ9Y4W2 734 aaKnown RBP37.01■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms