RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MCM3P25205 808 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 MAP9Q49MG5 647 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
VTI1B-204ENST00000554659 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 GIMAP7Q8NHV1 300 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 URI1O94763 535 aaPredicted RBP16.23■□□□□ 0.19
VTI1B-204ENST00000554659 ADCY5O95622 1261 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
VTI1B-204ENST00000554659 NME9Q86XW9 330 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 UBE2HP62256 183 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 NUCB1Q02818 461 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 CKAP2LQ8IYA6 745 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 EMILIN1Q9Y6C2 1016 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 METTL24Q5JXM2 366 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 GJB2P29033 226 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 IGHMBP2P38935 993 aaKnown RBP16.22■□□□□ 0.19
VTI1B-204ENST00000554659 STX1AQ16623 288 aa16.22■□□□□ 0.19
VTI1B-204ENST00000554659 SEPT11Q9NVA2 429 aaKnown RBP16.22■□□□□ 0.19
VTI1B-204ENST00000554659 SSBP05455 408 aaKnown RBP eCLIP16.21■□□□□ 0.19
VTI1B-204ENST00000554659 IBSPP21815 317 aaPredicted RBP16.21■□□□□ 0.19
VTI1B-204ENST00000554659 FLIIQ13045 1269 aa16.21■□□□□ 0.19
VTI1B-204ENST00000554659 SPA17Q15506 151 aa16.21■□□□□ 0.19
VTI1B-204ENST00000554659 ECHDC1Q9NTX5 307 aa16.21■□□□□ 0.19
VTI1B-204ENST00000554659 ZSCAN23Q3MJ62 389 aa16.21■□□□□ 0.19
VTI1B-204ENST00000554659 PRIMPOLQ96LW4 560 aa16.21■□□□□ 0.19
VTI1B-204ENST00000554659 DYNC1I1O14576 645 aa16.21■□□□□ 0.18
VTI1B-204ENST00000554659 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.18
VTI1B-204ENST00000554659 FSIP1Q8NA03 581 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 KIF4BQ2VIQ3 1234 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 LRSAM1Q6UWE0 723 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 C16orf45Q96MC5 204 aaPredicted RBP16.2■□□□□ 0.18
VTI1B-204ENST00000554659 MYD88Q99836 296 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 DBF4Q9UBU7 674 aaPredicted RBP16.2■□□□□ 0.18
VTI1B-204ENST00000554659 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 CCDC8Q9H0W5 538 aaPredicted RBP16.2■□□□□ 0.18
VTI1B-204ENST00000554659 HYPKQ9NX55 129 aa16.2■□□□□ 0.18
VTI1B-204ENST00000554659 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 GDPD2Q9HCC8 539 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 PRDM11Q9NQV5 511 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 STARD3NLO95772 234 aa16.19■□□□□ 0.18
VTI1B-204ENST00000554659 NAPBQ9H115 298 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 CLCN1P35523 988 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 HMG20BQ9P0W2 317 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 GOLGA6L9A6NEM1 432 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 ZNF213O14771 459 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 GBP2P32456 591 aaPredicted RBP16.18■□□□□ 0.18
VTI1B-204ENST00000554659 CNNM3Q8NE01 707 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 SNX21Q969T3 373 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
VTI1B-204ENST00000554659 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 ZNF165P49910 485 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 KLHL10Q6JEL2 608 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
VTI1B-204ENST00000554659 WASLO00401 505 aaPredicted RBP16.17■□□□□ 0.18
VTI1B-204ENST00000554659 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
VTI1B-204ENST00000554659 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
VTI1B-204ENST00000554659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.17■□□□□ 0.18
VTI1B-204ENST00000554659 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
VTI1B-204ENST00000554659 GOLGA6L10A0A0M3HER8 536 aa16.16■□□□□ 0.18
VTI1B-204ENST00000554659 GOLGA8BA8MQT2 603 aa16.16■□□□□ 0.18
VTI1B-204ENST00000554659 PAXBP1Q9Y5B6 917 aa16.16■□□□□ 0.18
VTI1B-204ENST00000554659 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
VTI1B-204ENST00000554659 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
VTI1B-204ENST00000554659 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
VTI1B-204ENST00000554659 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
VTI1B-204ENST00000554659 PPP1R12BO60237 982 aaPredicted RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 SSRP1Q08945 709 aaKnown RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 MAP3K12Q12852 859 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 ABCF2Q9UG63 623 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 YEATS4O95619 227 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 ZSCAN22P10073 491 aaPredicted RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 C8orf34Q49A92 452 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 TMC6Q7Z403 805 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 TSG101Q99816 390 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 C14orf93Q9H972 538 aaKnown RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 POLR3GO15318 223 aaPredicted RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 ANAPC15P60006 121 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 NOS1P29475 1434 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms