RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 GIGYF1O75420 1035 aaPredicted RBP4.35□□□□□ -1.71
SEC23A-207ENST00000554615 C8orf58Q8NAV2 365 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 BCANQ96GW7 911 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.35□□□□□ -1.71
SEC23A-207ENST00000554615 MYH14Q7Z406 1995 aaKnown RBP4.35□□□□□ -1.71
SEC23A-207ENST00000554615 HOXC9P31274 260 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 EVCP57679 992 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 CCDC146Q8IYE0 955 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 IP6K1Q92551 441 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 TM6SF1Q9BZW5 370 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 ANKRD31Q8N7Z5 1873 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 ZNF609O15014 1411 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 LOXHD1Q8IVV2 1947 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 MCM4P33991 863 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 CLCN1P35523 988 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 PDIA6Q15084 440 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 RABL6Q3YEC7 729 aaPredicted RBP4.35□□□□□ -1.71
SEC23A-207ENST00000554615 TMED8Q6PL24 325 aaPredicted RBP4.35□□□□□ -1.71
SEC23A-207ENST00000554615 TSPYL6Q8N831 410 aa4.35□□□□□ -1.71
SEC23A-207ENST00000554615 ATP8B2P98198 1209 aa4.34□□□□□ -1.71
SEC23A-207ENST00000554615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.34□□□□□ -1.71
SEC23A-207ENST00000554615 CHMP5Q9NZZ3 219 aa4.34□□□□□ -1.71
SEC23A-207ENST00000554615 ZMYM6O95789 1325 aa4.34□□□□□ -1.71
SEC23A-207ENST00000554615 PDIA4P13667 645 aaKnown RBP4.34□□□□□ -1.71
SEC23A-207ENST00000554615 GTF2F1P35269 517 aaKnown RBP eCLIP4.34□□□□□ -1.71
SEC23A-207ENST00000554615 CCT4P50991 539 aaKnown RBP4.34□□□□□ -1.71
SEC23A-207ENST00000554615 CWC22Q9HCG8 908 aaKnown RBP4.34□□□□□ -1.71
SEC23A-207ENST00000554615 ERBB3P21860 1342 aa4.34□□□□□ -1.71
SEC23A-207ENST00000554615 RTL9Q8NET4 1388 aa4.34□□□□□ -1.71
SEC23A-207ENST00000554615 TAF1P21675 1872 aa4.34□□□□□ -1.71
SEC23A-207ENST00000554615 BRCA1P38398 1863 aaKnown RBP4.34□□□□□ -1.71
SEC23A-207ENST00000554615 ZNF500O60304 480 aaPredicted RBP4.34□□□□□ -1.72
SEC23A-207ENST00000554615 RIPK4P57078 832 aa4.34□□□□□ -1.72
SEC23A-207ENST00000554615 TBC1D9Q6ZT07 1266 aa4.34□□□□□ -1.72
SEC23A-207ENST00000554615 NME9Q86XW9 330 aa4.34□□□□□ -1.72
SEC23A-207ENST00000554615 TTC41PQ6P2S7 1318 aa4.34□□□□□ -1.72
SEC23A-207ENST00000554615 RAD50Q92878 1312 aa4.34□□□□□ -1.72
SEC23A-207ENST00000554615 SALL1Q9NSC2 1324 aa4.34□□□□□ -1.72
SEC23A-207ENST00000554615 PRKAR2BP31323 418 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 KLHL40Q2TBA0 621 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 RAB11FIP3O75154 756 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 CD2BP2O95400 341 aaKnown RBP4.33□□□□□ -1.72
SEC23A-207ENST00000554615 BRD1O95696 1058 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 ARHGEF25Q86VW2 580 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 C22orf23Q9BZE7 217 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 SRCIN1Q9C0H9 1055 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 FAM53CQ9NYF3 392 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 COG6Q9Y2V7 657 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 EMILIN1Q9Y6C2 1016 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 DOCK5Q9H7D0 1870 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 WDR19Q8NEZ3 1342 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 FAM69CQ0P6D2 419 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 RABEP1Q15276 862 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 SKOR2Q2VWA4 1001 aaPredicted RBP4.33□□□□□ -1.72
SEC23A-207ENST00000554615 LMBRD1Q9NUN5 540 aa4.33□□□□□ -1.72
SEC23A-207ENST00000554615 HSPA4P34932 840 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 RFX5P48382 616 aaPredicted RBP4.32□□□□□ -1.72
SEC23A-207ENST00000554615 BEND3Q5T5X7 828 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 ELP1O95163 1332 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 NEDD4P46934 1319 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 FAM237AA0A1B0GTK4 181 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 CDC45O75419 566 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 EIF4A1P60842 406 aaKnown RBP4.32□□□□□ -1.72
SEC23A-207ENST00000554615 ZNF512BQ96KM6 892 aaPredicted RBP4.32□□□□□ -1.72
SEC23A-207ENST00000554615 DDX11L8A8MPP1 907 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 MCM5P33992 734 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 ST3GAL1Q11201 340 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 TWISTNBQ3B726 338 aaPredicted RBP4.32□□□□□ -1.72
SEC23A-207ENST00000554615 ELOA2Q8IYF1 753 aaPredicted RBP4.32□□□□□ -1.72
SEC23A-207ENST00000554615 FRAT1Q92837 279 aaPredicted RBP4.32□□□□□ -1.72
SEC23A-207ENST00000554615 KAZALD1Q96I82 304 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 GGNBP2Q9H3C7 697 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 GPR108Q9NPR9 543 aa4.32□□□□□ -1.72
SEC23A-207ENST00000554615 SH3TC1Q8TE82 1336 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 K7ELQ4 463 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 ALDH1L1O75891 902 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 KCNA6P17658 529 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 MCM2P49736 904 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 MTHFSDQ2M296 383 aaKnown RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 ZNF326Q5BKZ1 582 aaKnown RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 IL17REQ8NFR9 667 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 GAS2L2Q8NHY3 880 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 TSR2Q969E8 191 aaKnown RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 PLA2G12BQ9BX93 195 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 LSG1Q9H089 658 aaKnown RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 COL11A2P13942 1736 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 RTL5Q5HYW3 569 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-207ENST00000554615 SKAP1Q86WV1 359 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 EYA1Q99502 592 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 MYH4Q9Y623 1939 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 IGSF3O75054 1194 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 ATG3Q9NT62 314 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 SPTLC3Q9NUV7 552 aa4.31□□□□□ -1.72
SEC23A-207ENST00000554615 SOS2Q07890 1332 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-207ENST00000554615 A0A0G2JMZ2 1700 aa4.3□□□□□ -1.72
SEC23A-207ENST00000554615 LRRC37A2A6NM11 1700 aa4.3□□□□□ -1.72
SEC23A-207ENST00000554615 XRCC6P12956 609 aaKnown RBP eCLIP4.3□□□□□ -1.72
SEC23A-207ENST00000554615 AKAP4Q5JQC9 854 aa4.3□□□□□ -1.72
SEC23A-207ENST00000554615 GGT6Q6P531 493 aa4.3□□□□□ -1.72
SEC23A-207ENST00000554615 COG3Q96JB2 828 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms