RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 INTS5Q6P9B9 1019 aaKnown RBP14.08□□□□□ -0.16
SHMT2-213ENST00000554600 NLGN1Q8N2Q7 840 aa14.08□□□□□ -0.16
SHMT2-213ENST00000554600 ZNF784Q8NCA9 323 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-213ENST00000554600 ZNF330Q9Y3S2 320 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-213ENST00000554600 N4BP2Q86UW6 1770 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-213ENST00000554600 ZPR1O75312 459 aa14.07□□□□□ -0.16
SHMT2-213ENST00000554600 GPR162Q16538 588 aa14.07□□□□□ -0.16
SHMT2-213ENST00000554600 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
SHMT2-213ENST00000554600 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
SHMT2-213ENST00000554600 TEX13AQ9BXU3 409 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-213ENST00000554600 SRP68Q9UHB9 627 aaKnown RBP14.07□□□□□ -0.16
SHMT2-213ENST00000554600 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
SHMT2-213ENST00000554600 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
SHMT2-213ENST00000554600 GYS1P13807 737 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 TAF7Q15545 349 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-213ENST00000554600 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 THUMPD2Q9BTF0 503 aaKnown RBP14.06□□□□□ -0.16
SHMT2-213ENST00000554600 MIS18AQ9NYP9 233 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 CEP350Q5VT06 3117 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 COL15A1P39059 1388 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
SHMT2-213ENST00000554600 RIPK4P57078 832 aa14.05□□□□□ -0.16
SHMT2-213ENST00000554600 C1QTNF8P60827 252 aa14.05□□□□□ -0.16
SHMT2-213ENST00000554600 NPM2Q86SE8 214 aaKnown RBP14.05□□□□□ -0.16
SHMT2-213ENST00000554600 RRP7AQ9Y3A4 280 aaKnown RBP14.05□□□□□ -0.16
SHMT2-213ENST00000554600 SOS1Q07889 1333 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-213ENST00000554600 USP42Q9H9J4 1324 aaKnown RBP14.05□□□□□ -0.16
SHMT2-213ENST00000554600 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
SHMT2-213ENST00000554600 PARP3Q9Y6F1 533 aa14.04□□□□□ -0.16
SHMT2-213ENST00000554600 FKBP8Q14318 412 aa14.03□□□□□ -0.16
SHMT2-213ENST00000554600 USPL1Q5W0Q7 1092 aa14.03□□□□□ -0.16
SHMT2-213ENST00000554600 PNISRQ8TF01 805 aaKnown RBP14.03□□□□□ -0.16
SHMT2-213ENST00000554600 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
SHMT2-213ENST00000554600 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
SHMT2-213ENST00000554600 A0A087WZG4 1122 aa14.02□□□□□ -0.17
SHMT2-213ENST00000554600 A1BGP04217 495 aa14.02□□□□□ -0.17
SHMT2-213ENST00000554600 SNRPA1P09661 255 aaKnown RBP14.02□□□□□ -0.17
SHMT2-213ENST00000554600 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
SHMT2-213ENST00000554600 LMOD3Q0VAK6 560 aa14.02□□□□□ -0.17
SHMT2-213ENST00000554600 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
SHMT2-213ENST00000554600 SCN7AQ01118 1682 aa14.01□□□□□ -0.17
SHMT2-213ENST00000554600 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
SHMT2-213ENST00000554600 ANP32CO43423 234 aa14.01□□□□□ -0.17
SHMT2-213ENST00000554600 PIP4K2AP48426 406 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-213ENST00000554600 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
SHMT2-213ENST00000554600 USP16Q9Y5T5 823 aa14.01□□□□□ -0.17
SHMT2-213ENST00000554600 BCORQ6W2J9 1755 aa14.01□□□□□ -0.17
SHMT2-213ENST00000554600 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
SHMT2-213ENST00000554600 KIAA1551Q9HCM1 1747 aa14□□□□□ -0.17
SHMT2-213ENST00000554600 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
SHMT2-213ENST00000554600 IL6STP40189 918 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-213ENST00000554600 EIF5P55010 431 aaKnown RBP13.99□□□□□ -0.17
SHMT2-213ENST00000554600 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
SHMT2-213ENST00000554600 TSPYL4Q9UJ04 414 aa13.99□□□□□ -0.17
SHMT2-213ENST00000554600 NUP98P52948 1817 aa13.99□□□□□ -0.17
SHMT2-213ENST00000554600 DDR1Q08345 913 aa13.98□□□□□ -0.17
SHMT2-213ENST00000554600 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
SHMT2-213ENST00000554600 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
SHMT2-213ENST00000554600 CACNA1SQ13698 1873 aa13.97□□□□□ -0.17
SHMT2-213ENST00000554600 YBX3P16989 372 aaKnown RBP eCLIP13.97□□□□□ -0.179e-9■□□□□ 9.1
SHMT2-213ENST00000554600 GRIN3BO60391 1043 aa13.96□□□□□ -0.17
SHMT2-213ENST00000554600 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
SHMT2-213ENST00000554600 NFIXQ14938 502 aa13.96□□□□□ -0.17
SHMT2-213ENST00000554600 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
SHMT2-213ENST00000554600 DZIP3Q86Y13 1208 aaKnown RBP13.96□□□□□ -0.17
SHMT2-213ENST00000554600 BCL2L12Q9HB09 334 aa13.96□□□□□ -0.17
SHMT2-213ENST00000554600 MRS2Q9HD23 443 aa13.96□□□□□ -0.17
SHMT2-213ENST00000554600 ARFGEF1Q9Y6D6 1849 aa13.96□□□□□ -0.17
SHMT2-213ENST00000554600 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 PXDNLA1KZ92 1463 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
SHMT2-213ENST00000554600 APAF1O14727 1248 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 TM4SF1P30408 202 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 ANKRD31Q8N7Z5 1873 aa13.95□□□□□ -0.18
SHMT2-213ENST00000554600 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 NPHP1O15259 732 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-213ENST00000554600 SERPINB2P05120 415 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 TGFB2P61812 414 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 NBPF10Q6P3W6 841 aaKnown RBP13.94□□□□□ -0.18
SHMT2-213ENST00000554600 NBPF15Q8N660 670 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 DLEC1Q9Y238 1755 aa13.94□□□□□ -0.18
SHMT2-213ENST00000554600 DPEP1P16444 411 aa13.93□□□□□ -0.18
SHMT2-213ENST00000554600 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
SHMT2-213ENST00000554600 TBC1D9BQ66K14 1250 aa13.93□□□□□ -0.18
SHMT2-213ENST00000554600 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
SHMT2-213ENST00000554600 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
SHMT2-213ENST00000554600 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
SHMT2-213ENST00000554600 MYL6BP14649 208 aa13.92□□□□□ -0.18
SHMT2-213ENST00000554600 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
SHMT2-213ENST00000554600 BABAM1Q9NWV8 329 aa13.92□□□□□ -0.18
SHMT2-213ENST00000554600 ZNF652Q9Y2D9 606 aa13.92□□□□□ -0.18
SHMT2-213ENST00000554600 CHRNA5P30532 468 aa13.91□□□□□ -0.18
SHMT2-213ENST00000554600 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
SHMT2-213ENST00000554600 CARMIL3Q8ND23 1372 aa13.91□□□□□ -0.18
SHMT2-213ENST00000554600 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms