RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 ZBTB1Q9Y2K1 713 aa35.89■■■■□ 3.34
KTN1-215ENST00000554567 MRC1P22897 1456 aa35.88■■■■□ 3.33
KTN1-215ENST00000554567 RNF181Q9P0P0 153 aa35.88■■■■□ 3.33
KTN1-215ENST00000554567 NARFQ9UHQ1 456 aa35.88■■■■□ 3.33
KTN1-215ENST00000554567 VIRMAQ69YN4 1812 aaKnown RBP35.87■■■■□ 3.33
KTN1-215ENST00000554567 APLP1P51693 650 aa35.87■■■■□ 3.33
KTN1-215ENST00000554567 NFIXQ14938 502 aa35.87■■■■□ 3.33
KTN1-215ENST00000554567 COL15A1P39059 1388 aa35.87■■■■□ 3.33
KTN1-215ENST00000554567 KCPQ6ZWJ8 1503 aa35.86■■■■□ 3.33
KTN1-215ENST00000554567 CANXP27824 592 aaKnown RBP35.85■■■■□ 3.33
KTN1-215ENST00000554567 C16orf71Q8IYS4 520 aaPredicted RBP35.84■■■■□ 3.33
KTN1-215ENST00000554567 VSIG10Q8N0Z9 540 aa35.83■■■■□ 3.33
KTN1-215ENST00000554567 U2SURPO15042 1029 aaKnown RBP35.82■■■■□ 3.32
KTN1-215ENST00000554567 TTC5Q8N0Z6 440 aa35.82■■■■□ 3.32
KTN1-215ENST00000554567 SERPINB2P05120 415 aa35.81■■■■□ 3.32
KTN1-215ENST00000554567 BCL2L12Q9HB09 334 aa35.81■■■■□ 3.32
KTN1-215ENST00000554567 KDM2BQ8NHM5 1336 aa35.8■■■■□ 3.32
KTN1-215ENST00000554567 BICDL1Q6ZP65 573 aa35.78■■■■□ 3.32
KTN1-215ENST00000554567 AFDNP55196 1824 aaKnown RBP35.78■■■■□ 3.32
KTN1-215ENST00000554567 STARD3NLO95772 234 aa35.77■■■■□ 3.32
KTN1-215ENST00000554567 RBM46Q8TBY0 533 aaKnown RBP35.77■■■■□ 3.32
KTN1-215ENST00000554567 RRAGCQ9HB90 399 aa35.77■■■■□ 3.32
KTN1-215ENST00000554567 RASSF7Q02833 373 aa35.76■■■■□ 3.32
KTN1-215ENST00000554567 TEFQ10587 303 aa35.76■■■■□ 3.32
KTN1-215ENST00000554567 IL17REQ8NFR9 667 aa35.74■■■■□ 3.31
KTN1-215ENST00000554567 GNAT3A8MTJ3 354 aa35.73■■■■□ 3.31
KTN1-215ENST00000554567 C2CD5Q86YS7 1000 aa35.73■■■■□ 3.31
KTN1-215ENST00000554567 DNAJC5GQ8N7S2 189 aa35.73■■■■□ 3.31
KTN1-215ENST00000554567 ZNF496Q96IT1 587 aaPredicted RBP35.73■■■■□ 3.31
KTN1-215ENST00000554567 ZNF330Q9Y3S2 320 aaPredicted RBP35.73■■■■□ 3.31
KTN1-215ENST00000554567 SBF1O95248 1867 aa35.73■■■■□ 3.31
KTN1-215ENST00000554567 GAS2L2Q8NHY3 880 aa35.72■■■■□ 3.31
KTN1-215ENST00000554567 UBR2Q8IWV8 1755 aa35.71■■■■□ 3.31
KTN1-215ENST00000554567 A0A087WZG4 1122 aa35.71■■■■□ 3.31
KTN1-215ENST00000554567 EIF5P55010 431 aaKnown RBP35.71■■■■□ 3.31
KTN1-215ENST00000554567 ZNF790Q6PG37 636 aa35.71■■■■□ 3.31
KTN1-215ENST00000554567 TTLL6Q8N841 843 aa35.71■■■■□ 3.31
KTN1-215ENST00000554567 NRXN2Q9P2S2 1712 aa35.7■■■■□ 3.31
KTN1-215ENST00000554567 COL3A1P02461 1466 aaPredicted RBP35.69■■■■□ 3.3
KTN1-215ENST00000554567 H0YIN7 160 aa35.69■■■■□ 3.3
KTN1-215ENST00000554567 HTRA3P83110 453 aa35.68■■■■□ 3.3
KTN1-215ENST00000554567 CARMIL3Q8ND23 1372 aa35.67■■■■□ 3.3
KTN1-215ENST00000554567 HEG1Q9ULI3 1381 aa35.67■■■■□ 3.3
KTN1-215ENST00000554567 TBC1D9BQ66K14 1250 aa35.67■■■■□ 3.3
KTN1-215ENST00000554567 TEX13AQ9BXU3 409 aaPredicted RBP35.67■■■■□ 3.3
KTN1-215ENST00000554567 TBC1D2BQ9UPU7 963 aa35.67■■■■□ 3.3
KTN1-215ENST00000554567 LMNB1P20700 586 aa35.66■■■■□ 3.3
KTN1-215ENST00000554567 FSTL1Q12841 308 aa35.66■■■■□ 3.3
KTN1-215ENST00000554567 NPC1L1Q9UHC9 1359 aa35.65■■■■□ 3.3
KTN1-215ENST00000554567 PRELPP51888 382 aa35.64■■■■□ 3.3
KTN1-215ENST00000554567 CCDC24Q8N4L8 307 aa35.64■■■■□ 3.3
KTN1-215ENST00000554567 ZNF622Q969S3 477 aaKnown RBP eCLIP35.63■■■■□ 3.296e-7■■□□□ 14.3
KTN1-215ENST00000554567 PHACTR3Q96KR7 559 aa35.62■■■■□ 3.29
KTN1-215ENST00000554567 FMNL2Q96PY5 1086 aa35.62■■■■□ 3.29
KTN1-215ENST00000554567 DLEC1Q9Y238 1755 aa35.61■■■■□ 3.29
KTN1-215ENST00000554567 WDR90Q96KV7 1748 aa35.61■■■■□ 3.29
KTN1-215ENST00000554567 A1BGP04217 495 aa35.61■■■■□ 3.29
KTN1-215ENST00000554567 NPM2Q86SE8 214 aaKnown RBP35.61■■■■□ 3.29
KTN1-215ENST00000554567 TNRC6CQ9HCJ0 1690 aaKnown RBP35.6■■■■□ 3.29
KTN1-215ENST00000554567 KCNQ3O43525 872 aa35.6■■■■□ 3.29
KTN1-215ENST00000554567 ZNF219Q9P2Y4 722 aaPredicted RBP35.6■■■■□ 3.29
KTN1-215ENST00000554567 PRKAR2BP31323 418 aa35.59■■■■□ 3.29
KTN1-215ENST00000554567 IL6STP40189 918 aaPredicted RBP35.59■■■■□ 3.29
KTN1-215ENST00000554567 ZC3H4Q9UPT8 1303 aaKnown RBP35.58■■■■□ 3.29
KTN1-215ENST00000554567 BTBD11A6QL63 1104 aa35.58■■■■□ 3.29
KTN1-215ENST00000554567 CFAP53Q96M91 514 aa35.58■■■■□ 3.29
KTN1-215ENST00000554567 SIPA1L3O60292 1781 aaPredicted RBP35.57■■■■□ 3.28
KTN1-215ENST00000554567 GLTPD2A6NH11 291 aa35.57■■■■□ 3.28
KTN1-215ENST00000554567 PDE6BP35913 854 aa35.57■■■■□ 3.28
KTN1-215ENST00000554567 SMC1BQ8NDV3 1235 aa35.57■■■■□ 3.28
KTN1-215ENST00000554567 BRIP1Q9BX63 1249 aa35.57■■■■□ 3.28
KTN1-215ENST00000554567 NFKBIEO00221 500 aa35.56■■■■□ 3.28
KTN1-215ENST00000554567 NPHP1O15259 732 aa35.56■■■■□ 3.28
KTN1-215ENST00000554567 PRR5LQ6MZQ0 368 aa35.56■■■■□ 3.28
KTN1-215ENST00000554567 KLRG1Q96E93 195 aa35.55■■■■□ 3.28
KTN1-215ENST00000554567 CCDC88AQ3V6T2 1871 aa35.54■■■■□ 3.28
KTN1-215ENST00000554567 CEMIPQ8WUJ3 1361 aa35.54■■■■□ 3.28
KTN1-215ENST00000554567 C21orf2O43822 256 aa35.54■■■■□ 3.28
KTN1-215ENST00000554567 VEGFAP15692 232 aaPredicted RBP35.54■■■■□ 3.28
KTN1-215ENST00000554567 SETDB2Q96T68 719 aa35.54■■■■□ 3.28
KTN1-215ENST00000554567 RSPH6AQ9H0K4 717 aa35.54■■■■□ 3.28
KTN1-215ENST00000554567 ANKRD31Q8N7Z5 1873 aa35.52■■■■□ 3.28
KTN1-215ENST00000554567 CAMTA2O94983 1202 aa35.52■■■■□ 3.28
KTN1-215ENST00000554567 PIP4K2AP48426 406 aaPredicted RBP35.52■■■■□ 3.28
KTN1-215ENST00000554567 PDZRN3Q9UPQ7 1066 aa35.52■■■■□ 3.28
KTN1-215ENST00000554567 NUDCQ9Y266 331 aa35.52■■■■□ 3.28
KTN1-215ENST00000554567 SCN7AQ01118 1682 aa35.52■■■■□ 3.28
KTN1-215ENST00000554567 USP16Q9Y5T5 823 aa35.51■■■■□ 3.28
KTN1-215ENST00000554567 DZIP3Q86Y13 1208 aaKnown RBP35.5■■■■□ 3.27
KTN1-215ENST00000554567 CNBD1Q8NA66 436 aa35.5■■■■□ 3.27
KTN1-215ENST00000554567 U2AF1L5P0DN76 240 aaPredicted RBP35.49■■■■□ 3.27
KTN1-215ENST00000554567 U2AF1Q01081 240 aaKnown RBP eCLIP35.49■■■■□ 3.27
KTN1-215ENST00000554567 MCM10Q7L590 875 aa35.48■■■■□ 3.27
KTN1-215ENST00000554567 RTF1Q92541 710 aaKnown RBP35.48■■■■□ 3.27
KTN1-215ENST00000554567 TIAM2Q8IVF5 1701 aa35.47■■■■□ 3.27
KTN1-215ENST00000554567 PRAMEF22A3QJZ6 481 aa35.47■■■■□ 3.27
KTN1-215ENST00000554567 DPY19L2Q6NUT2 758 aa35.47■■■■□ 3.27
KTN1-215ENST00000554567 ST5P78524 1137 aa35.46■■■■□ 3.27
KTN1-215ENST00000554567 ERFEQ4G0M1 354 aa35.46■■■■□ 3.27
KTN1-215ENST00000554567 COL11A2P13942 1736 aaPredicted RBP35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms